Os11g0485200

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Revision as of 09:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0485200| Description = ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein| Version = NM_001074446.2 GI:297611839 GeneID:435...")
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Gene Name

Os11g0485200

Description

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein

Version

NM_001074446.2 GI:297611839 GeneID:4350530

Length

5346 bp

Definition

Oryza sativa Japonica Group Os11g0485200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18935208..18940553

Sequence Coding Region

18935419..18935565,18936093..18937205,18937282..18937410,18937672..18937894,18937992..18938138
,18938239..18938480,18938568..18938597,18938693..18938774,18938880..18939040
,18939110..18939274,18939652..18939775,18940022..18940230

Expression

GEO Profiles:Os11g0485200

Genome Context

<gbrowseImage1> name=NC_008404:18935208..18940553 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:18935208..18940553 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcacgcgagcctgcggcggcggcggaggcggaggacgtcgtggcccgtctcggcaccgacgaggcgactgggctgacggaggaggaggcggcgcgccgcctcaagctgtacgggcctaacctcgtggtcgcccatcacccccaggtgggtggcaagcttcttgctacactaaagtgcatcgtcctgctctggggatgggatcactccttcaccgagtacattaaatacgagattggatgggagtcatgggagcatcttatcttcccctgctccagggagatgttatgtgtcatgttcatcaatttctcgtcatgggcggcattggcggctgcacttgtgtcccttgcccttaactcagctggtcagacaacctatgaactgatcgttatcgtctccttacttgtgggaagcctgtgtgcatgctgtgttgccaagctccttgccaatcgtgctaaggcaccgctggaagctaaagcttttgcgcgaaggaccaaggttctgagggatggaatatggaaacatgaggatgcgaccaatcttgtccctggggatatcatatatctcaagtgtggtgatattgtgccagccaatgcttttgtcctcaacatggcacagatcgacaccaaaaccatccgtcatgaaaggagtgttaactatgtgatgggctcccttatatactatggctgggctgtctcctgtggcgaagggactgctgttgttactgtgacaggcaataacatccccatgagcactctgaaacagctttatccaaaacgattctctcggcctgggcagcttaggaagggtgtcatggctgctgccactttttgcttctgcttagtacttgttggcatcacaagtgaggctcttgttaaattctttttccatcaaagcataggcacgctgcacagtggccactttatgccacttattggtctaataccaatgtcgattcctgctgtgctctacctggcattggcattggactctcagaggctttccaaattgggggttgccagccggggaacttttgctcttgaagacttggctagcatggatgctatgctcttcaacatgactggcactttgacatgcaacaagccctattttgacaaggacaagattgaagtgcttacagaaggtattgataaagatcatgctgtcctgttggctgcgcgggcttccaaagcacacaatgaactgtataaagaaccgattgatgcagccattctaggccttatggatgatccagaacaggcacgagttggcattaatgttatagagcaccgctcccgtatgtttgttgcaatgacattgatgtacatgactacttacatcgatgaaaatggctccaagtgttctgtgctcaaaggtgaccctgcattgatgcttcgtgactgcagttgtagcgaagaagtcagagagcatatacgcaaacgtattgataagctcggtcttgatggatatcaatgtattgctgttggacgtattgttaactctcggttggacatcattattcttctacctttcatagatgatctcagaagcgatagtgcagaagctgttgataatcttactgatatgggtctgagtgtaatagtacttacagaaagcccaatgacaattacaaagcacgtatgtggaagacttggaaaactgggcttaaatgtgttacatgctgactctatgcgggagttggtaagcagcaaaaatgagcttttcttgaatatcaatgggatttctgatctctttgtagaatataaccgttatgttatatcaaatctgagaacttattttggtcgtcgtagtgcaatggttggatatgaattttcggatgttgattctatccgtgaaagcgatattggaatcgcagttgccgatgccactgatagcaccaaaagtgaatctgatattgttttgactgagcatgccttgctgtctgtttcttctgctgttcaagccagtagggaaatttgtcagatcatgaaaggatgcatggtttatgctgtttcatcaactgtccatgcttttgctgtccgtcttattttactcctatggagactcgagctaccctgtttcccgatgctggtgattgctgcttgcaactactgcacatcaactgcaatgttatttgaaagggtgaaaccatcccagtcaccagatagtttgaaagcaaacaagattatcgcaactggtgctgcttttggaagctatattgccctgagtacagtcgtttttttcataatgactactaggactgacttcatatctcacataatcaaagctagattgcttgttggccatgatgaggagattaaatctgccttattccttcaaatgagcattgttaaccatgctattggacttttcgcacattcacgcgatggccactgctctgggcctattgttacaatttcttctgttctatctcaactggtggcaaccgtcattgctgtttatggtgacgtgaactctcctctaccaaagggcattggctggggctgggcaggatttatctggctctacaactttgtcttgcttttgagcctcatgttgatctgtgacctgtgtaaccttgcaaagttcaacatatttgggataacctgcaggaggctgttcactggttggaccgagtggatggagaggtgcaggaggctgctcaacaggggtaaaacgtggatggagatgttgaccttaactgctatctcaggcttgattcttgtctggtcgatatatgcatatcatgtcatgaaggtcccgcagcagtag</cdnaseq>

Protein Sequence

<aaseq>MSREPAAAAEAEDVVARLGTDEATGLTEEEAARRLKLYGPNLVV AHHPQVGGKLLATLKCIVLLWGWDHSFTEYIKYEIGWESWEHLIFPCSREMLCVMFIN FSSWAALAAALVSLALNSAGQTTYELIVIVSLLVGSLCACCVAKLLANRAKAPLEAKA FARRTKVLRDGIWKHEDATNLVPGDIIYLKCGDIVPANAFVLNMAQIDTKTIRHERSV NYVMGSLIYYGWAVSCGEGTAVVTVTGNNIPMSTLKQLYPKRFSRPGQLRKGVMAAAT FCFCLVLVGITSEALVKFFFHQSIGTLHSGHFMPLIGLIPMSIPAVLYLALALDSQRL SKLGVASRGTFALEDLASMDAMLFNMTGTLTCNKPYFDKDKIEVLTEGIDKDHAVLLA ARASKAHNELYKEPIDAAILGLMDDPEQARVGINVIEHRSRMFVAMTLMYMTTYIDEN GSKCSVLKGDPALMLRDCSCSEEVREHIRKRIDKLGLDGYQCIAVGRIVNSRLDIIIL LPFIDDLRSDSAEAVDNLTDMGLSVIVLTESPMTITKHVCGRLGKLGLNVLHADSMRE LVSSKNELFLNINGISDLFVEYNRYVISNLRTYFGRRSAMVGYEFSDVDSIRESDIGI AVADATDSTKSESDIVLTEHALLSVSSAVQASREICQIMKGCMVYAVSSTVHAFAVRL ILLLWRLELPCFPMLVIAACNYCTSTAMLFERVKPSQSPDSLKANKIIATGAAFGSYI ALSTVVFFIMTTRTDFISHIIKARLLVGHDEEIKSALFLQMSIVNHAIGLFAHSRDGH CSGPIVTISSVLSQLVATVIAVYGDVNSPLPKGIGWGWAGFIWLYNFVLLLSLMLICD LCNLAKFNIFGITCRRLFTGWTEWMERCRRLLNRGKTWMEMLTLTAISGLILVWSIYA YHVMKVPQQ</aaseq>

Gene Sequence

<dnaseqindica>212..358#886..1998#2075..2203#2465..2687#2785..2931#3032..3273#3361..3390#3486..3567#3673..3833#3903..4067#4445..4568#4815..5023#gctgcgtctcctcgagcagagcagagcagcggcgtcgccggcgttgctgctcccgcgccgccgcatcctcgctcgccggtgacggtgagcatccatctccctcctcctctccggcgacacttctcgaatccgcgctaaccctagcaattcttctcctgtagatccggaagattctctctctgtgccttgaataaaccctcttaaaccccccatgtcacgcgagcctgcggcggcggcggaggcggaggacgtcgtggcccgtctcggcaccgacgaggcgactgggctgacggaggaggaggcggcgcgccgcctcaagctgtacgggcctaacctcgtggtcgcccatcacccccaggttcgctttgttcctccttccctccccctccctgtttcttttcttttgccctaattgatttcgacgactttcgtggggattgcgctcactaacgcctcacaatcattctatactgttgcagtatgtgtgtggctttgcatctgctgtatgtttcactatctcttgacttcaattggcgagtatatgccctccatcatgtcgaaactctagcaagcaatgaatcgaatgccttttgagcttgtgtattgaactataagcctcatcttttagcttatgcttatgcttataagctaaaatttgaattttcaaccttaaatttggaattgattttgaggtttttcatcttagtatattttcggtttgcaaatatgccgtttcgcttattccgtcaataagcgaaacgatggagtcgtatgatgtcctgtgagagaaaaaaaagtgagaaaagatttttttttttgaaatttttaataaaggttacatacattagcagtttgatgttggtggccttcaacattgtgcttcaggtgggtggcaagcttcttgctacactaaagtgcatcgtcctgctctggggatgggatcactccttcaccgagtacattaaatacgagattggatgggagtcatgggagcatcttatcttcccctgctccagggagatgttatgtgtcatgttcatcaatttctcgtcatgggcggcattggcggctgcacttgtgtcccttgcccttaactcagctggtcagacaacctatgaactgatcgttatcgtctccttacttgtgggaagcctgtgtgcatgctgtgttgccaagctccttgccaatcgtgctaaggcaccgctggaagctaaagcttttgcgcgaaggaccaaggttctgagggatggaatatggaaacatgaggatgcgaccaatcttgtccctggggatatcatatatctcaagtgtggtgatattgtgccagccaatgcttttgtcctcaacatggcacagatcgacaccaaaaccatccgtcatgaaaggagtgttaactatgtgatgggctcccttatatactatggctgggctgtctcctgtggcgaagggactgctgttgttactgtgacaggcaataacatccccatgagcactctgaaacagctttatccaaaacgattctctcggcctgggcagcttaggaagggtgtcatggctgctgccactttttgcttctgcttagtacttgttggcatcacaagtgaggctcttgttaaattctttttccatcaaagcataggcacgctgcacagtggccactttatgccacttattggtctaataccaatgtcgattcctgctgtgctctacctggcattggcattggactctcagaggctttccaaattgggggttgccagccggggaacttttgctcttgaagacttggctagcatggatgctatgctcttcaacatgactggcactttgacatgcaacaagccctattttgacaaggacaagattgaagtgcttacagaaggtattgataaagatcatgctgtcctgttggctgcgcgggcttccaaagcacacaatgaactgtataaagaaccgattgatgcagccattctaggccttatggatgatccagaacaggtaccttcttattaggatctatgtgcttttccttcttgttctttttccagaaggcttaacaaaccaattgatgcaggcacgagttggcattaatgttatagagcaccgctcccgtatgtttgttgcaatgacattgatgtacatgactacttacatcgatgaaaatggctccaagtgttctgtgctcaaaggtgaccctgcattggtaagcaaccaatccactgtcagcaaatccaatgaaactgcccctcctttagtaccacatgcattacttgtttacatttcctcacactagcttataagacatgttgacccaaatcatagcacctcccagctcattctatgagaaagcataaacgcaagcccactgcaaggttgctgggctgagtggattttggctgagcttgtggaagcaaaggaataacatagatgtattcatctcaattatcttcttttcttggcacagatgcttcgtgactgcagttgtagcgaagaagtcagagagcatatacgcaaacgtattgataagctcggtcttgatggatatcaatgtattgctgttggacgtattgttaactctcggttggacatcattattcttctacctttcatagatgatctcagaagcgatagtgcagaagctgttgataatcttactgatatgggtctgagtgtaatagtacttacaggtgatctttgcaatgtctcctatgtttatcttgattttcatgtcattttttatctgcattttatctaagtgttctcacgtttgttttgctatttcagaaagcccaatgacaattacaaagcacgtatgtggaagacttggaaaactgggcttaaatgtgttacatgctgactctatgcgggagttggtaagcagcaaaaatgagcttttcttgaatatcaatgggatttctgatctctttgtaggtctgcttcttgccttgatagttatgttgattattgctacatatgtcactttttgtgaattttttgcttactgagttgctctttcaatttgttattgcagaatataaccgttatgttatatcaaatctgagaacttattttggtcgtcgtagtgcaatggttggatatgaattttcggatgttgattctatccgtgaaagcgatattggaatcgcagttgccgatgccactgatagcaccaaaagtgaatctgatattgttttgactgagcatgccttgctgtctgtttcttctgctgttcaagccagtagggaaatttgtcagatcatgaaaggatgcatggtaagtcacacatgtccattcgcaattcctctgttcgcagatgatttttaggtttttgtatgtgactaatatgtgcttcaattgcaggtttatgctgtttcatcaactgtccatgctgtgagtagacatatagaattataatttccttttatacttttcaaaattgactaatataaacttctgatgctaataaatttgtttatctgttaaagtttgctgtccgtcttattttactcctatggagactcgagctaccctgtttcccgatgctggtgattgctgcttgcaactactgtgagtttgtaacttcgtaatgttgttgtagccataaatttgcaatatataatactttgttgtttgtttcatgatttactatctgccttttattgtaattcccaggcacatcaactgcaatgttatttgaaagggtgaaaccatcccagtcaccagatagtttgaaagcaaacaagattatcgcaactggtgctgcttttggaagctatattgccctgagtacagtcgtttttttcataatgactactaggactgacttcatatctgtaagaacttgtcacccttattatttgtgtgattttctagtaccaaacctaattaacagtatttgacagcacataatcaaagctagattgcttgttggccatgatgaggagattaaatctgccttattccttcaaatgagcattgttaaccatgctattggacttttcgcacattcacgcgatggccactgctctgggcctattgttacaatttcttctgttctatctcaactggtgagttattcccctgctcaatttccaccccaatgtgatatgtggcttttattgcaattgatttagacaaccacctgccaattctcgagtacaatgaacttgcaatattcttgttcctgtgtcctcagtcctaaattggctcagtaacactgatactataatcagaggcaaattatgtttctgaaacagatttgtgatgtggacataacatagtctggtcactgatcaaaccacttgacatgaacaaataaccatataaccatttctctttgtgtacaaagtatttgattattgcttgcagctgtagtaaagtatcatgccaagcttaatttttaagctcaatacatgcatgggttactgaacaaacttattttcaggtggcaaccgtcattgctgtttatggtgacgtgaactctcctctaccaaagggcattggctggggctgggcaggatttatctggctctacaactttgtcttgcttttgagcctcatgttgatctgtatgtatcggaggatattttatttgattttttttatttacatcttttgaagttggtgcatcactgcatgaacctaaaaacttgatatattgtctttcactgcttcatctgaatgcacagtagtgaagccttattgtcaagcactcaagcatgctcaccttttacaatcgtagtagtgaaatttgggagttgcatatctgtcaagagttcaatttagtctaatctagttgtcacgttctttggcaggtgacctgtgtaaccttgcaaagttcaacatatttgggataacctgcaggaggctgttcactggttggaccgagtggatggagaggtgcaggaggctgctcaacaggggtaaaacgtggatggagatgttgaccttaactgctatctcaggcttgattcttgtctggtcgatatatgcatatcatgtcatgaaggtcccgcagcagtagggtggcacttgacaggtagccttgacattaacatatagctttaggtcgcaaattagtgactaagcaatgtagcaatgtatattattaacccgtgtaaagtaaatgtcatcgacatggttttgtttctgtctttttcttttttcttttcttgggtccgggcttctactgccgtataattttgataagagggaagtatatgggtggtcaacttgtgcggatgtgtcattcgaatctgaactctcaaaatatattttgggtatcaaacttgttttgggtgtcatgtaggcccaaacgagctctgacctgttttatgcacggatgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0485200, RefSeq:Os11g0485200