Os11g0497000

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0497000| Description = Similar to Ubiquitin activating enzyme-like protein (SUMO activating enzyme 1a)| Version = NM_001074469.1 GI:11548558...")
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Gene Name

Os11g0497000

Description

Similar to Ubiquitin activating enzyme-like protein (SUMO activating enzyme 1a)

Version

NM_001074469.1 GI:115485586 GeneID:4350554

Length

6200 bp

Definition

Oryza sativa Japonica Group Os11g0497000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19496971..19503170

Sequence Coding Region

19497085..19497182,19497690..19497741,19498600..19498795,19499170..19499249,19499393..19499509
,19500220..19500270,19501339..19501405,19501549..19501652,19501730..19501837
,19502802..19502915

Expression

GEO Profiles:Os11g0497000

Genome Context

<gbrowseImage1> name=NC_008404:19496971..19503170 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19496971..19503170 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcggcggcggcgcggaggaggagctgacggcgcaggagacggcgctctacgaccgccagatccgcgtctggggcgttgacgcccagaagaggctaagtaaagctcatgtgctcgtgtgcggcatgaatggtactactactgagttctgcaagaatattgttctagcaggagttggcagtttatccttgatggatgatcatttagtcacagaggatgatctcaatgcaaatttcttaattcctcatgatgagagcatatatggtggtagatcacgagctgaggtttgctgtgagtccctgaaagatttcaatccaatggtccgagttgcagtcgaaaagggtgatccatcattaattgatggagaattccttgacaagtttgacataattgtagttagctgtgcgcctattaaaacaaagttgttaattaacgacaactgccggaagagaagcaagcatattgcattctacgccattgagtgcaaggattcctgtggtgaaatatttgttgatttgcagaaccatagctatgttcagaaggttggaggtgaacccaaaccaaaggagttggcatatccaagtctccaggaagctatctccgtaccctggaagaatttaccaagaaaaacaactaaactgtactttgccatgagagtactggagaattatgagtcatctgaaggccgcaatgcttgtgaggcatcactttctgatcgacctgcagttttggctctgaggaaggacatgtgtgataaaatgtctttaagtgagtctcaaattcctactgctctcctggaacggcttttagcagctggaaagaagcaacatcctcctgtatgtgcaatccttggcggcattcttggtcaggaggtgattaagtcaatatctggtaagggtgatccgatcaagaatttcttctattacgacgccgctgatggtaaagggatcgctgaagacattcctcccctttcttcagactga</cdnaseq>

Protein Sequence

<aaseq>MGGGGGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGM NGTTTEFCKNIVLAGVGSLSLMDDHLVTEDDLNANFLIPHDESIYGGRSRAEVCCESL KDFNPMVRVAVEKGDPSLIDGEFLDKFDIIVVSCAPIKTKLLINDNCRKRSKHIAFYA IECKDSCGEIFVDLQNHSYVQKVGGEPKPKELAYPSLQEAISVPWKNLPRKTTKLYFA MRVLENYESSEGRNACEASLSDRPAVLALRKDMCDKMSLSESQIPTALLERLLAAGKK QHPPVCAILGGILGQEVIKSISGKGDPIKNFFYYDAADGKGIAEDIPPLSSD</aaseq>

Gene Sequence

<dnaseqindica>115..212#720..771#1630..1825#2200..2279#2423..2539#3250..3300#4369..4435#4579..4682#4760..4867#5832..5945#agcgaaagccaagaacgccaaaaaccctcgctttgctgctgctcctcccccttctccttcggctgctgatcggattcgcggcgtcccaggctagggatccgggcggtggcggcgatgggcggcggcggcggcgcggaggaggagctgacggcgcaggagacggcgctctacgaccgccagatccgcgtctggggcgttgacgcccagaagaggtatccccggctccgcctctctctctctctctctctctctctctctctctctctctctctctcttcccctaaaagtcccgggttttctttcgctcttcgcttatgtggaggaaattttgttgagttgatgcttcttctttttcttctcttttaatcgcaggttgtttcttgcagaaaaggaagaaaagaaaatcattcttttgggggatttcatggtttatgttagaacgaatggctgttgtttgtttctttaaaagaaaaacttgagcccgaagtgtttgtatttttgaagtgaagacagagatatccgctgttttcgtatcttgtgtctgctattgaattttcctaaatctttttttttgagcttgtttggtgctttccttgaatttctcgtaactttcacccccaaattattcttccattccatcgtatttgttagcttcggaaccaaaacttttgatgtctttcatctgtttttgactactgaatctgtgctgcttggaacaggctaagtaaagctcatgtgctcgtgtgcggcatgaatggtactactactgaggtaggtattttaagattttcctctccaattgttgcgttttgtttgtagtttacaccgcgtgggcattcaaagcattgaaacgaagttgcattgagttatggagtaataggggttagtttcatgggccaaattgcccatgtttacctgttgcttttagttcgttattataactcattagttttctgggcatttgattattgctctgttgttcttgtagactttctagtgctatggatgcattgcctgcgagataaaatctcaatgttcttatttactttttaggctggctttttctcttttgtaggacccctgttgtaccatctgttaaagttaattgcttttagttctcaacgtttaggctcaattttctgtagataaattctttcatttatttatgctagcttacgttgttccaatatatgtctatttatccttttcttttacagtcatatcccatgattatctgatcaatgcacttcgctttgttaagaatatgattgctattatactatttactacttccttcgtttcatattataagactttctggcattgcctacattcatatatatgttaatgaatctagacatatatgtgtgcctagattcattaacatctatatgaatatgggcaatgctagaaagtcttataacctgaaacggaggtagtagttaaagtatatgccttagaaactagatttctgtagtcatagagtatcataagcagctgcatcctgactcaattgtatattcatctaggtacttaagtacctcagttcttctggatatattgataaagcttaactcataatcgaaggcagccttatacactaaatgccatttctctcttaccctgtagttctgcaagaatattgttctagcaggagttggcagtttatccttgatggatgatcatttagtcacagaggatgatctcaatgcaaatttcttaattcctcatgatgagagcatatatggtggtagatcacgagctgaggtttgctgtgagtccctgaaagatttcaatccaatggtccgagttgcagtcgaaaagggtgagcctagtctggttttcttcattggtttgggtgtcagaattagaagtacataaagtaggatgccttcttgcattcttgaattgctctcgtcctaatggttaatctttgaataaaatgttaaagaagagattctatttcaatttgtaatcttacacttttagctgcactttaacaaggaaagttcttgtaagaaatcatttaattttagtaacaggcacatgttactatagtgtatcattgtaccaagaaatcagcatatatgttactgagagaattctgatatatctgtggccataacaatgactaattctttggatcttcacagcatattctaaaaacaaatttcttactgtttctgctatttcctttaggtgatccatcattaattgatggagaattccttgacaagtttgacataattgtagttagctgtgcgcctattaaaacaaaggtgtgtattcttctcccgtttagttcttcatcctattgcaagttccaagtcactcagtgtcttttaaactaaaattctgcaacaaatttctctttattgcgctcagttctcacaacatttctgcatgtgttgtactgctttagttgttaattaacgacaactgccggaagagaagcaagcatattgcattctacgccattgagtgcaaggattcctgtggtgaaatatttgttgatttgcagaaccatagctatgttcaggtatgggcatatatgacatgctatatgttctgttgatttttcagtttaatttttttccagcagtccacatatatatctgtaagcactaagcatcgcgcagatgtcttaaattggtttattttctccataatgtttctcatatactgcttccaatattccttcctgtgtacatgcatgtggtttgtgtacttgttagtacttttcttcatgtactctagaggcactcattttttttctatgatatgtttgaactcaaaattgatgtcattatgtcagactgttcatgttaacatattaaatctgatgtacttagcctgatgaaggtgccattaaggatgagaattgcaaaggagcacgtacttttttttggtaataaaatgtagtgtactaatctgctctcactgactggttttcaaccaagttattgtatctgttccttttctgcatcattgaaatggtgatacaaagaaaggttacttagttttggtgcttaaaatatggtaatgtgacactttctagcatattaagttttgtaatttgtaccaaggattcatcttgcaatgctagttttggttcaatcgctatgaatatataagcacttatgctttggaaatcatgatcactagaatgtttcaggaattattttctttgttcagtagtttgggccctggatacttttttgaaggggtatgtgtttttttttttctcagaaggttggaggtgaacccaaaccaaaggagttggcatatccaagtctccaggtaaatgacttgttaagctgatcttttttttatatgtttgagaggaagctgatccaacttgagataacatctttcatttaatattacatgttttgtattgcccctgtagtttgttctctcttggctgccataaatgtagctgtggaatatttatgatgcaccttatacaagctacatggtatatatacatgaaaaccatttaacctgaaaaaataaacaatttgaatagtgtcttcatgttttaataatagtaaacttatgttttcctctgaaaaaaatgattttctgtaagacaaaaaaataaatagacaaaatgcttactctgctgtttttttgttttgactatcagaatgccagagtgcttatttattcgaataaatgtgtatcatatattatatttttacaatactaagaacagtcatcttcaatctaaaacaaagtaaaaccatatcagccggcaatctacatgtatacatgtgccaatttgcagttaatcaaatcctaaaaaggacatacttatttacatagatattgacggagatcagtgtagcataccaacaccatctccttactccttttaaggagtaggtaaactaagtatgattgacaatctggataagacttgaatacgtagatacatctacagaagattgatgtagagcacagcaacactattaccaaatcctcttttcacggcatagaaaaatacacttatttatgctcatgtagcccagccttactattggaggtcttcatttcatgtggtaattaaattggttccacagaaatcccctttctgggttataggtgtttttggaataattttgtaagagttcaaatctacactagacaatgtgctgatgctttctggtttgttcattttgcatacatccctagaagaatggagtagcgtagcatgttgaccttgactttttagctttctttatgtgtatcatcacttaaatatgtgttcaatttgttgccatatgccaccatatatcaccattttggatgcttcagtttggaatgttacagtttgtttatcattggaaatgatcttttatacaggaagctatctccgtaccctggaagaatttaccaagaaaaacaactaaactgtactttgccatgagaggtgaggatgtcagacttttgcagcactgttgaagattcattagtgcagttttatctccccaaatactcaaacaaatcagccagctttctaacttgtttttccctgcccctgcgcatatgtcctcttgaaatgtccttttgcagtactggagaattatgagtcatctgaaggccgcaatgcttgtgaggcatcactttctgatcgacctgcagttttggctctgaggaaggacatgtgtgataaaatggtatataagtttttgtgttccttaatttcaatcatgttctttaagatttttttcatggtgtggtaaataaactgcagtctttaagtgagtctcaaattcctactgctctcctggaacggcttttagcagctggaaagaagcaacatcctcctgtatgtgcaatccttggcggcattcttggtcaggtaggtaccaatgttccattacttgaatgtgaaaattgagtatatgtggttgaactagatggcaattaaggatttaccctctagtagatggtaattgaagtaaactactaacttcacaataaccatttcccccaaaagaaaaaaataaactcctcaacaaatactatgcatccacattttactcctgcagtaattcacttaaaccacattacttgggtccatgaacttaggaactacatattaaggtccttagtgggtcttttcggacatattgaaagacaacttaatttataatcatgaatgatggcccctggctgagggtgccttgcttgtcctggttgtgggtctcacagcctccaggcccaattcccatgacagacactttgcccagacatgtgctgaagtttgactatccttttgctacgtaagatcgatgtaaagctagcagaagtgctgtgtcctctaattatcagttatgattccctagctcagccatacaattttgggagcatgaatgtgtagttctcagtccaggggcccaagatgcatacttggatattgtgttgccacaattagatgatagttacacatggaattggatcggtactctcactggacaccttcaaagatgtaaatattttatctacagccttttggtggaatacggattttgtattgatggttcaaggaattatacacaatgaaagaactagcacaagaaagatttgaacattctgtagcaatgtaaaattttctgaattatttagcaacctcaactcagtgatgtctgaaaggagtccaaaagtagtaatattcctttttttgccaagaaaagtattctgtactttgtcaaatgttaatcttcaaaagcagcaggaacttaattttgttctgttccaaacaggaatttcatctgtgtttatgcacagttctcattgttttgcactctgtttttgcctaacaggaggtgattaagtcaatatctggtaagggtgatccgatcaagaatttcttctattacgacgccgctgatggtaaagggatcgctgaagacattcctcccctttcttcagactgaaccagttaactgctcgactcccattcagcctggcttcactaatccctgtacccattaattagcttcaaattagattagcagtcaatttaagtctgagagatacttagaactctactatttgttatttaagttgtgccagcttagaaatggtatcagatagaaattttacattttgtgccaacaatttcaaagctgaaaccaggaaaggttttgtgctgattgaaagattaaatgtgttgctctgtattctcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0497000, RefSeq:Os11g0497000