Os11g0503400

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0503400| Description = Armadillo-like helical domain containing protein| Version = NM_001074478.1 GI:115485604 GeneID:4350563| Length = 746...")
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Gene Name

Os11g0503400

Description

Armadillo-like helical domain containing protein

Version

NM_001074478.1 GI:115485604 GeneID:4350563

Length

7469 bp

Definition

Oryza sativa Japonica Group Os11g0503400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19759995..19767463

Sequence Coding Region

19761706..19762566,19766351..19766998

Expression

GEO Profiles:Os11g0503400

Genome Context

<gbrowseImage1> name=NC_008404:19759995..19767463 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19759995..19767463 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggggtggacagatccagctgaccgggagatcaggatgcttgctgcgataatcgtggggcatgttgctagcaacatcaacctttcacagttcccaggagcactgcaatccatcggttcactactagacccccgcgatgacttatctttctatgaccaggatgatcaacatgaccatgacaaaggcatggggcgatgccagctgcttgtgcaaggccttttggttattgagaggcttacttgtgatcataacaattgcatactaatctgcagagaccattgtctgctcagccatatccgctacgcaatcaggttgagaaagaaggtaacctttccggacatgtgccctgtgtggcccgagatgctcaagggctcgcttagagcgatggcctatttgatagccggtgttactgaagtagaactcgagacgcttgaatctatcttcaatgaactcccactagggatgatcatgggacacaaacggttcccagacataatgataccaaccattgcattgtacgcaaatttattatactaccgggacactacatttcctagcgaacacttctttgaaacgatgctgccagtcttcctatcttgtactgatattgaacaaggagaagaaatcacgtcagtatggaccaaggttggagtgttggcaggggcatcactcgcgaagctcttgcttaaatcagaagactcagttagtcgagatgatatcatgaagggtgagcaggtctttgatgggctcactaagctgctaactgcaccgaacacaacaatcagagaaattgcggcagaaatcttgcagcatgtgtactttcatgattatacgcatagactgagtctcacggaaaagttagtcgccgaactattccgtaccaatagtcaaatgggaacacaagctcagagtggtgcacttgcaatcacagtggaagcagaacacgatggagtgaaacaattcctaggtgataatgcccaaactagcagcctgaacagactggagcatgaggagcaatcaaactacacagaactgcagacaaccttactacacgtccttgcgtctacgactgaacatggaactgattgtttggcaaatgtgattcagaaaattgcacctggggacggtctcagcagatttgtggggatgctcaagtcgttggttgaaaagcacagcagagtcgttactgaagatggcctgataatcataaaggctaccgcctggctgatcatgtggatgttgaggagaagtgagttcgttcaggaaatcaggcaacagaagatcgtcgaggcactgcctgaggctacaaaaattgtttcccgtacatctctaacaaagaagaaacaacccgcatctgatctcgacatctggaagctcttgggttacaatatatattataaacggttcgcgagtaatatccggcttagcagtcgattgtctagtcttgtggaagatgcacaggacgaacttgttcgtcaacaagaagttaccgtacaagtggagtga</cdnaseq>

Protein Sequence

<aaseq>MLGWTDPADREIRMLAAIIVGHVASNINLSQFPGALQSIGSLLD PRDDLSFYDQDDQHDHDKGMGRCQLLVQGLLVIERLTCDHNNCILICRDHCLLSHIRY AIRLRKKVTFPDMCPVWPEMLKGSLRAMAYLIAGVTEVELETLESIFNELPLGMIMGH KRFPDIMIPTIALYANLLYYRDTTFPSEHFFETMLPVFLSCTDIEQGEEITSVWTKVG VLAGASLAKLLLKSEDSVSRDDIMKGEQVFDGLTKLLTAPNTTIREIAAEILQHVYFH DYTHRLSLTEKLVAELFRTNSQMGTQAQSGALAITVEAEHDGVKQFLGDNAQTSSLNR LEHEEQSNYTELQTTLLHVLASTTEHGTDCLANVIQKIAPGDGLSRFVGMLKSLVEKH SRVVTEDGLIIIKATAWLIMWMLRRSEFVQEIRQQKIVEALPEATKIVSRTSLTKKKQ PASDLDIWKLLGYNIYYKRFASNIRLSSRLSSLVEDAQDELVRQQEVTVQVE</aaseq>

Gene Sequence

<dnaseqindica>1712..2572#6357..7004#ggttcccattctccccttcgaattcgccgcttccccagtctccctcccatccaagatccaacagggccttgtagtggcgtcgccgctccgtcgacggaagctcagatgaggccaccgccatggccttctcctcccccggtctacggtcgccccaccatcgccctccctctctcgtccccggtcccagatgccgccatcctcacccttcctccccaatcgcgatccgtgatggcctcggcggcggggcgtcttgggaggcggcaggacggtcggatccgctcggcgccagagcatcgcacacggcttcctcggtggcggagtggaggggaagcaaagatataatggccagctccggtggccgaccctcctcgctttgtggagtttggccgacgctgctccttcccgctgttgtggccacttagatctgtgcaggatttgcgcattcggtgagtaatctctctccatttaccaccccctctatcccccaaggccgttactactgtacagcgtgggagtattgtaaatggcctaataaaccccaatccattcccctaatgttgccaaacgtgctgttaggatgagtacccacataggtgatctaggcaatgttataaggagattaataatatttcttagtatgaatttgaaaaactgggatgttagccttcggctcaatttgaaatagattattgagcggattatttactttactatagggatgaaataactatttgataaataaacttaacaaatataagtggtttataagaaagtttttttgacgacatgtaattttcgaagcatggggtatataatccgtttcggtaatccggtgaataatctgaaaagaactaaaagccgtgtatgatgaggtggggttcctccaagcaagcaccccctaattgctggtgttcttttgtaaagctgaaactatgacaagagcttatattttgtgacaggattttttgcttgctcatgttcctgtgtaaagcctacaaatctaacgagagcttgttttataacaggatcttcaatgttttggcagatgagcaatacttatattttctgaatcttctggttggtcccgtcatcagagcattcggtggcggaaggaagaatagaagggttattagtatatggcagctaggctggaaatcatccggtgaagcaaacagcttggtgaagggattgatgttcaagctgatgacaacaatactactgatcccattgtcactgctcgtccttcatcctttgttggttttatactggtgcatcatagttccagcaacacgcttgagtcaacaggattatggtcagggtgacggcgactcctccaaagccaacctgaagccagcaatgatgatcttctactctctagccctggctcagggtactctctacatgctatggttcattctcaacgcagggaatgcgatgatggttagggttgtggccagtaaatgcgattttgaaaagagttggggtcggaagtcggttgatcagtacctctctgataccaagttcaagtgcctcaaggacccatcatccatcaaggacatgaacctaatcaagtttgcagcaggtctacttgactcggactccgaggatgactacattacgggagcaaggatgcttgtttccttcattcagaagcaaaagctaccggtgaagttgctgatcctctaggatcaggacacagaagctgatcacaatgctggggtggacagatccagctgaccgggagatcaggatgcttgctgcgataatcgtggggcatgttgctagcaacatcaacctttcacagttcccaggagcactgcaatccatcggttcactactagacccccgcgatgacttatctttctatgaccaggatgatcaacatgaccatgacaaaggcatggggcgatgccagctgcttgtgcaaggccttttggttattgagaggcttacttgtgatcataacaattgcatactaatctgcagagaccattgtctgctcagccatatccgctacgcaatcaggttgagaaagaaggtaacctttccggacatgtgccctgtgtggcccgagatgctcaagggctcgcttagagcgatggcctatttgatagccggtgttactgaagtagaactcgagacgcttgaatctatcttcaatgaactcccactagggatgatcatgggacacaaacggttcccagacataatgataccaaccattgcattgtacgcaaatttattatactaccgggacactacatttcctagcgaacacttctttgaaacgatgctgccagtcttcctatcttgtactgatattgaacaaggagaagaaatcacgtcagtatggaccaaggttggagtgttggcaggggcatcactcgcgaagctcttgcttaaatcagaagactcagttagtcgagatgatatcatgaagggtgagcaggtctttgatgggctcactaagctgctaactgcaccgaacacaacaatcagagaaattgcggcagaaatcttgcagcatgtgtactttcatgattatacgcatagactgagtctcacggaaaaggtaagttatacttatgcgtaaaacaattattattaatgttattattattattgttactattataatgttagttttccaatttagcaatagttcagttacctaaattggctagaacaataaaagggcaatcactttggtgcaaatatactacaacttttagtattatttttattgttaatttcttgtatcgttttaaatacattttcattctcacgttgattataaatctttttttataccagcaaagataacaaaaattatttttttaactttgtgttaaaactttctttgtttcaccacatacaaaaagatgtgtaagtatgagttgttcaatatatatactataccgcacccggggtgcattgtagttcaaacacacttaattttggtaattttttttactgagagtacaatcattacaaatcccccctattaagcctattagtaatttttttactatcaggtatttgaaaacaaataatgtatagtaaataatttactatgcgagggcgtgttttagttatcgcgtaccgaggatgcgttttagcgcatccctctctatatatagcaaatctattctagactccccatagaataactattatataccacccattccatgggcgaaacacacctcccccctcttcctagggcccaaacccacctctcacctcggtcaaagcgtccccccgccggtcagacccctatcaaacccgcctactgactacccccacacccacctcttttcagttctcgtctcgtagaaacgacatagtaacacgacggtccatgtgtagctacacggctgctttctgcagtaacgacgtaaatatatagttatgatagatctaattcttgatttgaaagaaggtacaaaagaaataaaaagtagtatccaatcacaaagtctcactagttccaatggctagagttcaaatcttgttttcaacaatattactttcattttttgaatagaagggagggaggagagaccggttttcttgagaggaaaaacaagagggagagagatcagggaaaggacatgggagaaaaaaccagagtgggagagagaacgggtgggggcgccaggaggacggagggtggagttttctttagaggaaataaccgatgggagagagatcaggggaggagttctctttagaggaaataaccggagggagagagagagatcggggaaaggagaggaaaaccggagggagagagatcgggaagggggcaccgggaggagggagcagaaaagaaccagagggatggcgtgcgagaagaggggggggggaggcgtggtgcaggctgagtgggcagtggggtggggatgtagaatagagctgtcatacatacatatatatatatatatatttatacatatatatatatatacatacatatatatatatatacatacatacatacatatatatatatatacatatatatatacatatatatacatatatatatacatatatacatatatatatatatatacatatatatatatatatatatacacacacatatgtacatatgtatatatgtgtatacacacacacactaggtgaaaccccgcgcattgctgcgggagtttagtatgataacaataattaaaaataatgtgtaagatagctaaacaatataaacttacataagcactaaaatcaattgatgtgatatggcttaattagagaggatagaaataacattaaccaagtgaggatgaacttacataggtacataagatattataaaaaataatgaagataaatattgaaatattatgtgaattatgtggaatgatgatttaacatgctttcattttaaaagctctaaaatgtaatagattttaaattatagataatatagcatgtttgcatgatattaaatgtattgattgttagtggataatgatgtgtcaacttgttagtggataatgatgtggcatctttgcatgttaagctttaggagttagtgggttataactttatagtaagataggataccctcttcatttattcttttttctagcgttagagaagtactacatatgcctcagcctatagtgtgggctgagtgggcagtggggacgtggggtgtagaaaaatgaacagggcattttctactacatatgcctcagcctatagtgtattcttttgtccttggttttgtgtagtagaaaatgcccacttcatttttctattgcacaaaaccaaggagaaatgtacacatatactacctgtcctttcttgatgattccattttgacctacaaatcatgatatataatgacaaaatgttaatatcatgaaagcatttttgaaataaacctaatggcatcatttttataaaacattagttcaaacattaaatcagcaacaattctgggacttgaaaattttttaaaaagaaaaatagggtagcaagaaaataaatacaggtttccgtataaggtagatatgtatgtgtgcatatgaagtggcagatacagtcatcttggctgggccttccttgcaggtggagagcatgttatggttccatgcaatttctagtcttaccgattcattttagcaagagcaagatttgaccattggtaacattttggtgaaagttgtttgagttgttgccaattttctcttcaacattgtgtgggcttaaatttgtatatgaagctattagagggatgctaaataatttgactgccagtgtttcaccaaatgaaatatatgactttttattggaacttatttggcatggttgagtttagctacaaactaaacaagccttagggatgcctctacctatggatacttggggaatactcctcgtaactaatttaatcgctagcatgcacctaccgctatcattgtgatatatcagcccattttaagcctgtagtagtagtagtagtgtggagtcggtccaaggggccaataagtggtttttgtagttggtagtttaatttgtgctccaaccatattaccatgtgctaatccttttgcaggaagcaagtacgaatgtaagtggagtactatacgaaagtgagcgcgctcaacatgtagagcgggctaatgcagttcattcataaagcttagttgcatggttgcgtgtgcatacggccgggcctgccctgccctgtatccgggggagtttctaggcctatgtcgtttgtgtggtgagctgtcagagacgtcagcccataagaggggtaattataacacgcagcctgtttgtagcctgttttaagccttgatgtggtaccccgagttaaaaacgaggataaaagtgtaagcaaagttatgcgcatatgggcccattcaatgtgttgagcggactattgtgtttattggagggtgttacaaacatacctttggttatgtgtgatacttagagccccatcatgcatggctcctgtgtttctccgacaccgtagccattatcttggataccaaatataggagcagaattccaggaatcggtagaggtcaagagagaacgttggtgtggcctgtgccgaggttgccagtattataagtgcagttttttcttcttctgagttgtcaggattgcttttctttgagacataggctctttttaccattgacttgagcgcatgaaaatatagattgtcctttgacataggattttatgatccttaggaaggtactgtatctcgtagcattaatttgtggagaccatgaaaaaactcaaataaatggctacttttagcaaactaagattcattcttaaagtgcactttttgttgcttgcagttagtcgccgaactattccgtaccaatagtcaaatgggaacacaagctcagagtggtgcacttgcaatcacagtggaagcagaacacgatggagtgaaacaattcctaggtgataatgcccaaactagcagcctgaacagactggagcatgaggagcaatcaaactacacagaactgcagacaaccttactacacgtccttgcgtctacgactgaacatggaactgattgtttggcaaatgtgattcagaaaattgcacctggggacggtctcagcagatttgtggggatgctcaagtcgttggttgaaaagcacagcagagtcgttactgaagatggcctgataatcataaaggctaccgcctggctgatcatgtggatgttgaggagaagtgagttcgttcaggaaatcaggcaacagaagatcgtcgaggcactgcctgaggctacaaaaattgtttcccgtacatctctaacaaagaagaaacaacccgcatctgatctcgacatctggaagctcttgggttacaatatatattataaacggttcgcgagtaatatccggcttagcagtcgattgtctagtcttgtggaagatgcacaggacgaacttgttcgtcaacaagaagttaccgtacaagtggagtgatggacaggcggcatgcttatggattacgcgtgctagctgctagatcgattcatcttccgtttgccaaattaatcagcattgccgttgcattcgtggcgaacgcaccagcaaaccaacaacctagtagtattgttttcttttgtatatgttgaatcagagccatgccatgggcagccctgtagccgtccaaacagcccgagcaaacatattgttattttagtccctattgggatttgctatacatcaccagcgtgttcttttctgtaagtcggattgggatcaggtgcagtcactatagtgacttcaactttggatccaaccatctagctgataacgaacgtgcaggattcagttctgtattcttcttttcccctcaaaaaaattgtgtattcttctttagctgtttgaacatgaaatacttgcatgcttatttttcatttgagaagaagcttgatactactattt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0503400, RefSeq:Os11g0503400