Os11g0519100

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Revision as of 09:11, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0519100| Description = Conserved hypothetical protein| Version = NM_001074511.1 GI:115485670 GeneID:4350600| Length = 2127 bp| Definition ...")
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Gene Name

Os11g0519100

Description

Conserved hypothetical protein

Version

NM_001074511.1 GI:115485670 GeneID:4350600

Length

2127 bp

Definition

Oryza sativa Japonica Group Os11g0519100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:20483761..20485887

Sequence Coding Region

20483761..20483845,20483898..20483990,20484145..20484398,20484520..20484732,20484818..20484910
,20485354..20485458,20485543..20485887

Expression

GEO Profiles:Os11g0519100

Genome Context

<gbrowseImage1> name=NC_008404:20483761..20485887 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:20483761..20485887 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccaccgggtctgatgctatcgaccaacataatcagcacaaccatatggacaatggaggtgatgaattcttactgtcgttatatggcttcacccagcatgatgacaacacccttgtggctgatgtagttgatggcattactcaacacggtgaccacaaccagattaccaacgaagggggagtggagagaagggaccggggaaataatatgggacgtggtctccaaaggttaaaccgagcgtgccgtggcaagctacaagttgtcataactgaagggaatataaggccagtggttcctcttgttgctgcaaagtttgcaactgaatgcaacatcatagttaggaaccatgtgcctatactcccgcattggaagctatacaaggaaaaacctgcatctgcgtacgttaatctgttcttaggaaaactaaaggccaagtttgacataaacatagaggatgatacagttaaaatggcttgtactgagatgatgaagtccgcagttcgccaacaaagatacaggctgaagcaaaaatattttgatccttttccactacatttggttacaaaaacttctcctgtcaaattcatgagtaatgaacagtggactcaactcctagaatcatggaagagtccccaaaagatggagatgtgtcaaaagaacaaagaaaaccgagggaatgttaagtaccatcacacaaccggatctcgtgcctacatggttcatgttgaaaatttggatgacaaatacaatgatgaagaacctaatgcatttgatttgttcaaggagttccactacagcaagaaaaaaaaatgctacacccctgttgtacaggaggctattactcggatggaaaacaagctatctacaacaacagaaggtgaagaacttaagtcagtggctcaagttgttgctgatgtgcttgctgagaacaccaagaagaatcggttcttaaagaatgtggggttccataatgcccagcctagattcagtgagcagagcactgagacagaactagaagcggagaaaaggaccaatgctgagcttcgtgcacaggtggctgatttgtcaaacaaagtgcaagaatctgagcaggcaaggattaaagaccgagaggagatgaagaggagtcaatctgagatggaagcaaaacttaatcttttgctcagtcaaattcgaccaagttaa</cdnaseq>

Protein Sequence

<aaseq>MTTGSDAIDQHNQHNHMDNGGDEFLLSLYGFTQHDDNTLVADVV DGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACRGKLQVVITEGNIRPVVPLV AAKFATECNIIVRNHVPILPHWKLYKEKPASAYVNLFLGKLKAKFDINIEDDTVKMAC TEMMKSAVRQQRYRLKQKYFDPFPLHLVTKTSPVKFMSNEQWTQLLESWKSPQKMEMC QKNKENRGNVKYHHTTGSRAYMVHVENLDDKYNDEEPNAFDLFKEFHYSKKKKCYTPV VQEAITRMENKLSTTTEGEELKSVAQVVADVLAENTKKNRFLKNVGFHNAQPRFSEQS TETELEAEKRTNAELRAQVADLSNKVQESEQARIKDREEMKRSQSEMEAKLNLLLSQI RPS</aaseq>

Gene Sequence

<dnaseqindica>1..85#138..230#385..638#760..972#1058..1150#1594..1698#1783..2127#atgaccaccgggtctgatgctatcgaccaacataatcagcacaaccatatggacaatggaggtgatgaattcttactgtcgttatgtaagttttgtttgtatgatgaatgcttttcttacttgctgcccttttttagatggcttcacccagcatgatgacaacacccttgtggctgatgtagttgatggcattactcaacacggtgaccacaaccagattaccaacgaaggtgagtttgttcatctattttccatatttcatattgtctcagttgatcaatatttgtatgcaaagctttcaattcatgatcatcttggatcaatgtttgcttcacctcaataattttagttttaatttcaactgcaatgtacatttacaactagggggagtggagagaagggaccggggaaataatatgggacgtggtctccaaaggttaaaccgagcgtgccgtggcaagctacaagttgtcataactgaagggaatataaggccagtggttcctcttgttgctgcaaagtttgcaactgaatgcaacatcatagttaggaaccatgtgcctatactcccgcattggaagctatacaaggaaaaacctgcatctgcgtacgttaatctgttcttaggaaaactaaaggtacatgcattctctggtcctttccacatttagtctcaatagaagatccattgtttgttattttaagccataaattactgaattgatattcttttctataaatgttcttccattcgattaggccaagtttgacataaacatagaggatgatacagttaaaatggcttgtactgagatgatgaagtccgcagttcgccaacaaagatacaggctgaagcaaaaatattttgatccttttccactacatttggttacaaaaacttctcctgtcaaattcatgagtaatgaacagtggactcaactcctagaatcatggaagagtccccaaaagatggtatgttctctctgcaaaaccagattgatgccttgtgcatgctaatctatcaccaaccttacatgtattgttgtctttaatgtaggagatgtgtcaaaagaacaaagaaaaccgagggaatgttaagtaccatcacacaaccggatctcgtgcctacatggttcatgttgaaaatttggtaagtgggccattttaagcaccatataattttttgtatgaacaagctactgcttaaatacgtctgcctcagcctaaacaagatgatgtccatgctcatgttgttatgttcatgagagtccattagtttgtggaatgttcaaggacactatatctgatccgatgccaatacattgtgtgaaaggtgacgagttaggtttccatctatgtctaagttgagtgtgttaatagattaaaagttattgtttttatgtctgtgtatgcagtgaaagacctctgttgcagttgtttgtctaagtggaaaacatagtgtgactgtgtgcaacaaatgaggctagaaattagttgaacatgttcttttagattctcaattgaacagtagctgcccagattttcgtaacatcttaattcatgctggacctaatgcatatatgttgttctcaggatgacaaatacaatgatgaagaacctaatgcatttgatttgttcaaggagttccactacagcaagaaaaaaaaatgctacacccctgttgtacaggaggctattgtaagataattttcagactttgatctttgtagtgcttatttttaattctctcaacatcaaccatgtttgctactttcttgctagactcggatggaaaacaagctatctacaacaacagaaggtgaagaacttaagtcagtggctcaagttgttgctgatgtgcttgctgagaacaccaagaagaatcggttcttaaagaatgtggggttccataatgcccagcctagattcagtgagcagagcactgagacagaactagaagcggagaaaaggaccaatgctgagcttcgtgcacaggtggctgatttgtcaaacaaagtgcaagaatctgagcaggcaaggattaaagaccgagaggagatgaagaggagtcaatctgagatggaagcaaaacttaatcttttgctcagtcaaattcgaccaagttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0519100, RefSeq:Os11g0519100