Os11g0529900

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0529900| Description = Type III polyketide synthase family protein| Version = NM_001074540.1 GI:115485728 GeneID:4350635| Length = 1589 bp|...")
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Gene Name

Os11g0529900

Description

Type III polyketide synthase family protein

Version

NM_001074540.1 GI:115485728 GeneID:4350635

Length

1589 bp

Definition

Oryza sativa Japonica Group Os11g0529900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21071052..21072640

Sequence Coding Region

21071052..21072061,21072427..21072640

Expression

GEO Profiles:Os11g0529900

Genome Context

<gbrowseImage1> name=NC_008404:21071052..21072640 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21071052..21072640 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctactcctactgcagcaagccgccgtccggccgtcacgtcgccctgcggcggcggcggcgacggccatggccatcgccacgccgccgtgctcgccatcgggacggcgaacccggcgagctgggtgacacaggaggagtacgtcgactggtacttccgggtcaccaacagcgagcacctcgctgatctcaaggctaaaatgaagaggatatgtgacaaatccggcatcaagaagcgccatttccacctcaccgaggagctgctcgccgaccacccggacttcgccgaccgcgcgcagccgtcgctggacgcgcgcctcgacgtcgccgccgccgccgtcccggagctcgcggcggcggcggcggcgaggaaggccatcgcggagtggggccgcccggccggcgacatcacccatctggtcgtcaccaccaactccggcggccacgtggtcggcgccgacgtccgcctggcgagggtcctcggcctccgccccaccgtgcgccgcacgctgctgtacctcggcggctgctccgccggctccggcgcgctccgcctggccaaggacctcgccgagaacacccccggcgcgcgcgtcctggtggcctgcgccgagctcaacctcatcgcgttccgcggcccggaggatggctgcctcgacacgctcatcctgcaagggatcttcggcgacggcgccggcgccgccgtcgtcggcgccgacccggtcgtccccgtcgagcgccccatcttctacatggcgtccgcgtcccagaccaccatcccgggcaccgagcacgccatcaccgggcagctcaggaagggcggcctcgactaccacatcgcccacgagatgccgtccctcgtcggcgagcacatcgcccactgcgtcgccgacgcgctcgccccgctcggcatcggcatcgacgtcgacgtcgacggcggcggcggctggaacgggctgttctgggcggtgcaccccggcgggcgcgcgatcctggacagcgtggaggcgcggctggcgctggcgcccgggaagctggcggcgaaccgccgcgtgctgggcgagttcgggaacatggccggggcgacggtgttcttcgtgctcgacgagctgcggcgcgcgcgcggcgagggggagcagcgcggctgcgagtggggcgtcgccgtggcgttcgggccgggcgtcaccgtcgagacgatggtgctgcgcgccgtgcacttctga</cdnaseq>

Protein Sequence

<aaseq>MATPTAASRRPAVTSPCGGGGDGHGHRHAAVLAIGTANPASWVT QEEYVDWYFRVTNSEHLADLKAKMKRICDKSGIKKRHFHLTEELLADHPDFADRAQPS LDARLDVAAAAVPELAAAAAARKAIAEWGRPAGDITHLVVTTNSGGHVVGADVRLARV LGLRPTVRRTLLYLGGCSAGSGALRLAKDLAENTPGARVLVACAELNLIAFRGPEDGC LDTLILQGIFGDGAGAAVVGADPVVPVERPIFYMASASQTTIPGTEHAITGQLRKGGL DYHIAHEMPSLVGEHIAHCVADALAPLGIGIDVDVDGGGGWNGLFWAVHPGGRAILDS VEARLALAPGKLAANRRVLGEFGNMAGATVFFVLDELRRARGEGEQRGCEWGVAVAFG PGVTVETMVLRAVHF</aaseq>

Gene Sequence

<dnaseqindica>580..1589#1..214#atggctactcctactgcagcaagccgccgtccggccgtcacgtcgccctgcggcggcggcggcgacggccatggccatcgccacgccgccgtgctcgccatcgggacggcgaacccggcgagctgggtgacacaggaggagtacgtcgactggtacttccgggtcaccaacagcgagcacctcgctgatctcaaggctaaaatgaagaggatatgtaagtattttgtacattcttatgtcaaaacagagggatgtatcataacaacattcaaatttgacgtgtgctaggaatatgagtgaattttgcccctgatcttttacatcagtctaagatttctatgttgaactagccggtatacatacaactttataatgaagggtagcattagattagctcatgtaaatctgattttgttagtcaattaatatgctagaattattgagtaaagttgatacattattggctactgaaaaagtgaaattacctttgttttttttataatagaaatattttacatctccagcttttgccatgagacgaaattgcccttgtttgcatggcttaattccttcttgcaggtgacaaatccggcatcaagaagcgccatttccacctcaccgaggagctgctcgccgaccacccggacttcgccgaccgcgcgcagccgtcgctggacgcgcgcctcgacgtcgccgccgccgccgtcccggagctcgcggcggcggcggcggcgaggaaggccatcgcggagtggggccgcccggccggcgacatcacccatctggtcgtcaccaccaactccggcggccacgtggtcggcgccgacgtccgcctggcgagggtcctcggcctccgccccaccgtgcgccgcacgctgctgtacctcggcggctgctccgccggctccggcgcgctccgcctggccaaggacctcgccgagaacacccccggcgcgcgcgtcctggtggcctgcgccgagctcaacctcatcgcgttccgcggcccggaggatggctgcctcgacacgctcatcctgcaagggatcttcggcgacggcgccggcgccgccgtcgtcggcgccgacccggtcgtccccgtcgagcgccccatcttctacatggcgtccgcgtcccagaccaccatcccgggcaccgagcacgccatcaccgggcagctcaggaagggcggcctcgactaccacatcgcccacgagatgccgtccctcgtcggcgagcacatcgcccactgcgtcgccgacgcgctcgccccgctcggcatcggcatcgacgtcgacgtcgacggcggcggcggctggaacgggctgttctgggcggtgcaccccggcgggcgcgcgatcctggacagcgtggaggcgcggctggcgctggcgcccgggaagctggcggcgaaccgccgcgtgctgggcgagttcgggaacatggccggggcgacggtgttcttcgtgctcgacgagctgcggcgcgcgcgcggcgagggggagcagcgcggctgcgagtggggcgtcgccgtggcgttcgggccgggcgtcaccgtcgagacgatggtgctgcgcgccgtgcacttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0529900, RefSeq:Os11g0529900