Os11g0530600

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0530600| Description = Similar to Chalcone synthase C2 (EC 2.3.1.74) (Naringenin-chalcone synthase C2)| Version = NM_001074541.1 GI:11548573...")
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Gene Name

Os11g0530600

Description

Similar to Chalcone synthase C2 (EC 2.3.1.74) (Naringenin-chalcone synthase C2)

Version

NM_001074541.1 GI:115485730 GeneID:4350636

Length

3419 bp

Definition

Oryza sativa Japonica Group Os11g0530600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21105397..21108815

Sequence Coding Region

21105786..21106795,21108451..21108637

Expression

GEO Profiles:Os11g0530600

Genome Context

<gbrowseImage1> name=NC_008404:21105397..21108815 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21105397..21108815 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggtgacggtggaggaggtgaggagggcgcagagggcggaggggccggcgacggtgctggcgatcgggacggcgacgccggcgaactgcgtgtaccaggccgactacccggactactacttcaggatcaccaagagcgagcacatggtcgagctcaaggagaagttcaagaggatgtgtgacaagtcgcagatcaggaagaggtacatgcacctgacggaggagatcctgcaggagaaccccaacatgtgcgcgtacatggcgccgtcgctggacgcgcggcaggacatcgtcgtcgtcgaggtccccaagctggggaaggcggcggcgcagaaggcgatcaaggagtgggggcagccgcgctcccgcatcacccacctcgtcttctgcaccacctccggcgtcgacatgcccggcgccgactaccagctcgccaagatgctcggcctgaggcccaacgtgaaccgcctcatgatgtaccagcaggggtgcttcgccggcggcacggtgctccgcgtcgccaaggacctcgccgagaacaaccgcggcgcgcgcgtcctcgccgtgtgctccgagatcacggcggtgacgttccgggggccctccgagtcccacctcgactccatggtcgggcaggcgctgttcggcgacggcgcggcggcggtgatcgtcggctccgaccccgacgaggccgtcgagcggccgctgttccagatggtgtcggcgagccagaccatcctcccggacagcgagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggacgtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcaccgccggcgccgccgcctga</cdnaseq>

Protein Sequence

<aaseq>MAAAVTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYF RITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVV VEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRL MMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEITAVTFRGPSESHLDSMVGQALF GDGAAAVIVGSDPDEAVERPLFQMVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPG LISKNIERALGDAFTPLGISDWNSIFWVAHPGGPAILDQVEAKVGLDKERMRATRHVL SEYGNMSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPI TAGAAA</aaseq>

Gene Sequence

<dnaseqindica>2021..3030#179..365#gccaacccagcagcagcaagcagcgcacaagccccagcaccagcaagctgctactcatcatcagcgagagctagctagctgtgtgtgccacttacactgctgctgctgctggttctagctaagctcaccgatcgtcgtcttcgtcatcgccggtgacctggtgaattagtcgagagagatggcggcggcggtgacggtggaggaggtgaggagggcgcagagggcggaggggccggcgacggtgctggcgatcgggacggcgacgccggcgaactgcgtgtaccaggccgactacccggactactacttcaggatcaccaagagcgagcacatggtcgagctcaaggagaagttcaagaggatgtgtaagcatcccatctcacatctctctgcttcttcttcttctacctcattaatatattttgatcaatccggccatatgcatttttatatatatgcattatgcattcatgcatggatatatatatgatgatctccatgaaattttacgtgatggctgtatgcatatgtatatatgcaagctttggtttgttctctttggttaattttgttaattaattacctcatgcgtacgtatggagctacatgatggatgccggccatctagttataaaaaaaacagagagaagtgaaaaaaaaaggggattataattagctaaaagctatatgtattatatttttttctataaaggaaaaaaatcaaagcttacattctctgaagtaatatacactagctagcagttatatatgacaaaatctagcacctagctaggtgtatccatggacatggacaatcacaagctagtatatagctgcacagatgtttacaagggaacagtgtacataatactatatatgtttcttcttgtagcatgctaagagtacttttgtcttgagataattagttagggagtttgttagttatccttaagcatggtcatccatacacacacaagaacacacaagaagcatggccatggaaagaggacaacggtttgacctgatatagctaactcatacaagctagttaggttgtgtaggagtagtaggttcaggtgtctcacttactgacatgtcaagagtataagggaccccatagaggcaacttgatttctttaaaaattgaccaagcaaccagatatgaagtgctgatgttttcttcagcctgtgctttacaatttttctaatatatgattagttgaccatgcatcttcttgattaatcaaggagatcagatggaagatctactgcagcttttggagaaaaagaaagaaagcaaattaaagtaccaaattaatttgcatgcataaaagcaggcggatttggacgtttcacgggtcgtttatgggttgacggttgaagttcatagattttctaaatataaaaaaaataagcaaattgatagatcgatttttaattacccgagttcactttttcttatctttttttgcaaggagtaattaatctgaattactttgttgcgcacgaaaaccatttcttcaaccttaaaaaaaagaaaaaacttttttcccaactacaagtccatgatatcgtactatacctaccccttataaagacccagggcccacacgccatatagcaacaagacacagcagcagtggccactctcacttcgatcatgactcgactggagagctaattagttaattaccctgattaattcttccacacttaactacacatatatacaagagttacttaattaattaatttcatttttcccgcccaaaatagatactgtgagaaaaaaagaaattagggaaacgatgctgacgtcatcggaggatcaggaaatggaattgtgggagaaaaaaaagaaaataaaaagaaaaaagattaattcttccacacctaactatacatatatacaagagtttctttaattaattaatttcattttcccgccaaaacatggatactgtgagaagaaataattaattatgggaaattaaggatgctgctgacgtcatggatgcaggtgacaagtcgcagatcaggaagaggtacatgcacctgacggaggagatcctgcaggagaaccccaacatgtgcgcgtacatggcgccgtcgctggacgcgcggcaggacatcgtcgtcgtcgaggtccccaagctggggaaggcggcggcgcagaaggcgatcaaggagtgggggcagccgcgctcccgcatcacccacctcgtcttctgcaccacctccggcgtcgacatgcccggcgccgactaccagctcgccaagatgctcggcctgaggcccaacgtgaaccgcctcatgatgtaccagcaggggtgcttcgccggcggcacggtgctccgcgtcgccaaggacctcgccgagaacaaccgcggcgcgcgcgtcctcgccgtgtgctccgagatcacggcggtgacgttccgggggccctccgagtcccacctcgactccatggtcgggcaggcgctgttcggcgacggcgcggcggcggtgatcgtcggctccgaccccgacgaggccgtcgagcggccgctgttccagatggtgtcggcgagccagaccatcctcccggacagcgagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggacgtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcaccgccggcgccgccgcctgagcgctccgccctggtcgccgccggccggcctacgtacgccacacgtcatcttttatcatcgatcataaaaaaaaattatatatatatcgatatcgatatatatatatttcctaataataactactactacaataacaacgttatcgaattaaaaagttattcccttttgccgtgtgttggtagggataaaaagtgaaaaaaaaaattattactttgttttgcatgtgtcatgtatgggtggtttggttggtagtagcatatatatgtatactgaaaagagaaagggaggtcaattaagtgtcatggatggtgaggtttattgtaaacctgtgtaagagatgcttggctgttactattcaatttgaaaacttaattaattttgtgtacct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0530600, RefSeq:Os11g0530600