Os11g0534300

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0534300| Description = Zinc finger, DHHC-type domain containing protein| Version = NM_001074555.2 GI:297611938 GeneID:4350651| Length = 257...")
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Gene Name

Os11g0534300

Description

Zinc finger, DHHC-type domain containing protein

Version

NM_001074555.2 GI:297611938 GeneID:4350651

Length

2577 bp

Definition

Oryza sativa Japonica Group Os11g0534300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21309452..21312028

Sequence Coding Region

21309807..21310344,21310760..21311019,21311095..21311382,21311467..21311649,21311738..21311884

Expression

GEO Profiles:Os11g0534300

Genome Context

<gbrowseImage1> name=NC_008404:21309452..21312028 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21309452..21312028 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgaaggtgaggtggttgccgttcaagaagacccatctcgcccgcagcaacgcctccgacgcgtcctcccccacctccgccgccgccgccaccgccaccgccgtcaccacccaccgcctctaccaagtctggaggggcaggaacagattcctgtgcggcgggcggctcatcttcggcccggacgccagctccatcgtgctcaccgtgtcgctcatcatgacgccgctcgcgctctttgtcgccttcgtctccttccacctcgccgccctcatcgggaagccgctcggccaggccgtcccggccgtcgccatcgccgtcggcgtattcgacgtgatcgtgctggtgatgacgtcggggcgggacccggggatcatcccgcggaacgtgcggccgccggagcccgaggacatcggcgtgtcgtcgccggcgttcggcggcggcgggtcgctcccgccgacgcgcgacgtgtacgtgaacggcgtggtggtgaaggtgaaatactgccacacctgcctcctctaccgcccccctcgctgctcccactgctccgtctgcaacaactgcgtcgatcgcttcgaccaccactgcccctgggtcggccagtgcatcggcaagaggaactacaggttcttcttcatgttcatctcgtcgacgacgttcctgtgcctgtacgtgttcgtcttctgctgggtgaacctggcgatgaccgcgaggcagttcggctgcagcatggggcgcgcggtggtggagtcgccggtgtcggggatcctcatcgtgtacacgttcgtgacggcgtggttcgtcggcggcctcaccgcgttccactcctacctcgtctgcaccaaccagaccacgtacgagaacttccgctacaggtacgagcggaaggcgaacccgcacaaccgcggcgtcgccaagaacgtcgccgagatcttcctctcgccgatcccgccgagccggaacgacttccggtcaagggtcgccgtcgagcactactacgccgccggcgccggggcggcgtcggggcagtacttctactcctactcgatcgggccgctctcgtcggagtccaaggcggccagcttcaacacgcgggggagcctcagcttcgacatggccacggcgagcttcgacctcggcggcgtcggcgtcggcggcggcgtcggaggatactccgccaagcgcaccagcgtcgacgtctgctccaactcctccgacttcggcgacatctacggcggcgagcagcagccgccgcggcactccatcttcggcggcgacggcggaggagggaggacgagcgtcaggaaggccgacgacgtcccgacggagttcgggcactacggcgccgccgctgccgccgccgccggcggcggcggcggccggcctcgcgggagggagttcgaggccgtgtga</cdnaseq>

Protein Sequence

<aaseq>MLKVRWLPFKKTHLARSNASDASSPTSAAAATATAVTTHRLYQV WRGRNRFLCGGRLIFGPDASSIVLTVSLIMTPLALFVAFVSFHLAALIGKPLGQAVPA VAIAVGVFDVIVLVMTSGRDPGIIPRNVRPPEPEDIGVSSPAFGGGGSLPPTRDVYVN GVVVKVKYCHTCLLYRPPRCSHCSVCNNCVDRFDHHCPWVGQCIGKRNYRFFFMFISS TTFLCLYVFVFCWVNLAMTARQFGCSMGRAVVESPVSGILIVYTFVTAWFVGGLTAFH SYLVCTNQTTYENFRYRYERKANPHNRGVAKNVAEIFLSPIPPSRNDFRSRVAVEHYY AAGAGAASGQYFYSYSIGPLSSESKAASFNTRGSLSFDMATASFDLGGVGVGGGVGGY SAKRTSVDVCSNSSDFGDIYGGEQQPPRHSIFGGDGGGGRTSVRKADDVPTEFGHYGA AAAAAAGGGGGRPRGREFEAV</aaseq>

Gene Sequence

<dnaseqindica>1685..2222#1010..1269#647..934#380..562#145..291#tttctcttcctccttccttccacctcaccccaaccccaaccccaaccctggccccgtcccgcgcgtacggaggaggggcccatgcatgcatgcgggtgaggtgacaaggacgcggccacggggatcaccggcgcaccgaccgggatgttgaaggtgaggtggttgccgttcaagaagacccatctcgcccgcagcaacgcctccgacgcgtcctcccccacctccgccgccgccgccaccgccaccgccgtcaccacccaccgcctctaccaagtctggaggggcaggaacgtacgttttcaaaaacgaattcggacaaaattcgtgcgtttccacattaaaaggagcccatatattttgttgttgttgttgtgtgtagagattcctgtgcggcgggcggctcatcttcggcccggacgccagctccatcgtgctcaccgtgtcgctcatcatgacgccgctcgcgctctttgtcgccttcgtctccttccacctcgccgccctcatcgggaagccgctcggccaggccgtcccggccgtcgccatcgccgtcggcgtattcgtaagcccggccaccaccatttctgcgtcgctcgagcaaaatgaagcaattgaccgatcactttgcgtgcatgcgtgcgtgaaggacgtgatcgtgctggtgatgacgtcggggcgggacccggggatcatcccgcggaacgtgcggccgccggagcccgaggacatcggcgtgtcgtcgccggcgttcggcggcggcgggtcgctcccgccgacgcgcgacgtgtacgtgaacggcgtggtggtgaaggtgaaatactgccacacctgcctcctctaccgcccccctcgctgctcccactgctccgtctgcaacaactgcgtcgatcgcttcgaccaccactgcccctgggtcggccagtgcatcggcaaggtaggccgtcttctccgtctccggcggcgaccatctccgacgtgctgaccaactgttcgatccattgcctcgcagaggaactacaggttcttcttcatgttcatctcgtcgacgacgttcctgtgcctgtacgtgttcgtcttctgctgggtgaacctggcgatgaccgcgaggcagttcggctgcagcatggggcgcgcggtggtggagtcgccggtgtcggggatcctcatcgtgtacacgttcgtgacggcgtggttcgtcggcggcctcaccgcgttccactcctacctcgtctgcaccaaccagaccacgtacgagaacttccgctacaggtaccaatgttttaaatagcgggctaaaacatttagcggttacttcttaaacagctatagcaggctaaattgagctatagcggctaatttgtactctctccgtattttaatgtatgatgccattgactttttgataaacgcttaatctttcgttttattaaaaaaaattatgtaattataatttattttattgtgacttaatttatcatcaaatattctttaagcataacataagtattttttatttgcataaaatttttgaataagttgagtggctaaacgttggttaaaaaatcaacggcgtcatatattaaaatatggagggagtacacgagagcaaatagctcgaatccttctcaaacagttatagcgggagataagcagcagtttagcgagagattttaaaccttgacaggtacgagcggaaggcgaacccgcacaaccgcggcgtcgccaagaacgtcgccgagatcttcctctcgccgatcccgccgagccggaacgacttccggtcaagggtcgccgtcgagcactactacgccgccggcgccggggcggcgtcggggcagtacttctactcctactcgatcgggccgctctcgtcggagtccaaggcggccagcttcaacacgcgggggagcctcagcttcgacatggccacggcgagcttcgacctcggcggcgtcggcgtcggcggcggcgtcggaggatactccgccaagcgcaccagcgtcgacgtctgctccaactcctccgacttcggcgacatctacggcggcgagcagcagccgccgcggcactccatcttcggcggcgacggcggaggagggaggacgagcgtcaggaaggccgacgacgtcccgacggagttcgggcactacggcgccgccgctgccgccgccgccggcggcggcggcggccggcctcgcgggagggagttcgaggccgtgtgacgtcgccgccgccgtcgtctccaagtgcgttggcgccattttcttgggagctcgacgatgcaacgcagctaattaatcgatcaattaatgtagcgaatttttctctgtttttttttggtgatcttgtgcttccgctgctcgtgtgttgtgtagtagctttggttgatcagcttcctcatgcttgctaatggagtagtggtttccatagcattctagtactacttgcttaacttgatttagtgaaggtgatgtatacacacacaaatgcacacacacatgggtttaattttgtgtaattaggactgtgcatatatataaacggtgttcatgagttatccaaacattatcttttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0534300, RefSeq:Os11g0534300