Os11g0536800

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0536800| Description = Amidase family protein| Version = NM_001074559.1 GI:115485766 GeneID:4350655| Length = 4008 bp| Definition = Oryza ...")
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Gene Name

Os11g0536800

Description

Amidase family protein

Version

NM_001074559.1 GI:115485766 GeneID:4350655

Length

4008 bp

Definition

Oryza sativa Japonica Group Os11g0536800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21400290..21404297

Sequence Coding Region

21400456..21400554,21400660..21400893,21400985..21401209,21401295..21401465,21401550..21401686
,21401771..21401925,21402006..21402129,21402563..21402663,21402771..21402853
,21402939..21403163,21403250..21403365,21403447..21403540,21404044..21404289

Expression

GEO Profiles:Os11g0536800

Genome Context

<gbrowseImage1> name=NC_008404:21400290..21404297 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21400290..21404297 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaccctttcgtcttctccactctgctcttctcctcctgcaaccaaatccctcgttgtctccctccccgccttcccgccaggtgtcagccatgcgggagccacgtcgccctctcctccccctccccctcccccacctcctcctcgtctctctcctctcctcctctgccgccgcaccgggagcaggagcaggagcaccgccaagaaccggcggcggcggcgtcgcgaggagcatcgccgacatggcgtggccaacaaaatgcacatggttaccctggccaacctgtgggaagagccattcatatactcttgtttccaaataccacaagatctggaaggatacaaaggaggctgtttctgcaaaagatgtttccagaaaagaaccaattactggtgtgattgcattgaaggcttccatgaagtacttcgatgctgattttttcaacgattcaaaacttcgggagatggaagatggtgcaaaagaatttaatgtacctgcatttagagacaaccggaaattggtggcgttagagaatggtggattgcataacccgtctgcattggtctttaaatcatcatggagcgatgaaagcaaaatcagtgagaacaaaagctttcaatatccccatacatcttcagtacatcgccctagtaaagatgaagatattgcttttatgtcgataattgagctcggggagcttataaggacaaagcaagtcacatcgcgtgaacttactgctgtgttcttaaggagattaaagaggtatggtcctataatcgaatccgttattactatcactgatgatttagcatacaaacaagcgaaagaagctgatgacttgctggagcaaggaaaatatcttggtcccttacatggcattccgtatggccttaaggatataattgcagtaccagaatacaaaactacctggggctcaagaacttttgaaaaccaaattcttgatgtcgaagcctctgtctacaaaagattgaagtcaactggggcagtccttgtagcaaaacttgtaacaggctcgctcgcctatgatgatatatggtttggggggagaacaagaaacccctggaacattgaggagttttctactggttcatcagcagggccagcagctagcacctctgcaggaatggttccttttgcaataggttcagaaactgcaggttccataacatatcctgccgctagatgtggagtaactgctttgcgcacaacatttggaacagttgcacggacgggcgtcatgagcatttcagagagcttggataaacttggtcctttctgcagaagcgcgatagattgcgcagttgtacttgacgcaattcgcggcaaggatgccggcgatccatcatctcgtgaagttgctatcgaggatccctttcatgttgacatcagacaactcactgttggatatcttgacagtgctgagatggaggttgttcatgttctttccgctaagggtgttaagctagtgcctttcaagctgaactacaccgttcaatcggtccaatccatactgaacatcaccatggatgttgacatgcttgcgcatttcgacaactggcaacgcgagcgacacgacgacgactatgaagctcaggaccaatggccagtggagcttcgccgcgcacggttaatccccgcagtcgactatatacaggcacaacgagcacggggtaaactgatcagagaagtcagggagagcttcacggtcgatgcattcatcggcaatgtgaccgactgggagctcgtctgtcttggaaaccttgtggggatgccggtggctgtggtgccgacaggcttgaagagcatcaagaacccaccagaaggcggcacgcggagaagaaccaccgtgacgacgggcatatacgctcctcctgaccatgaccacgttgctctagctctggcaatggcgtaccagtctgtgactgaccaccacaaacaacgcccagcgatcgacgatctaggaccgggagatgacatacagcggtaa</cdnaseq>

Protein Sequence

<aaseq>MKPFRLLHSALLLLQPNPSLSPSPPSRQVSAMREPRRPLLPLPL PHLLLVSLLSSSAAAPGAGAGAPPRTGGGGVARSIADMAWPTKCTWLPWPTCGKSHSY TLVSKYHKIWKDTKEAVSAKDVSRKEPITGVIALKASMKYFDADFFNDSKLREMEDGA KEFNVPAFRDNRKLVALENGGLHNPSALVFKSSWSDESKISENKSFQYPHTSSVHRPS KDEDIAFMSIIELGELIRTKQVTSRELTAVFLRRLKRYGPIIESVITITDDLAYKQAK EADDLLEQGKYLGPLHGIPYGLKDIIAVPEYKTTWGSRTFENQILDVEASVYKRLKST GAVLVAKLVTGSLAYDDIWFGGRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSET AGSITYPAARCGVTALRTTFGTVARTGVMSISESLDKLGPFCRSAIDCAVVLDAIRGK DAGDPSSREVAIEDPFHVDIRQLTVGYLDSAEMEVVHVLSAKGVKLVPFKLNYTVQSV QSILNITMDVDMLAHFDNWQRERHDDDYEAQDQWPVELRRARLIPAVDYIQAQRARGK LIREVRESFTVDAFIGNVTDWELVCLGNLVGMPVAVVPTGLKSIKNPPEGGTRRRTTV TTGIYAPPDHDHVALALAMAYQSVTDHHKQRPAIDDLGPGDDIQR</aaseq>

Gene Sequence

<dnaseqindica>3744..3842#3405..3638#3089..3313#2833..3003#2612..2748#2373..2527#2169..2292#1635..1735#1445..1527#1135..1359#933..1048#758..851#9..254#atgaagtcatgaaaccctttcgtcttctccactctgctcttctcctcctgcaaccaaatccctcgttgtctccctccccgccttcccgccaggtgtcagccatgcgggagccacgtcgccctctcctccccctccccctcccccacctcctcctcgtctctctcctctcctcctctgccgccgcaccgggagcaggagcaggagcaccgccaagaaccggcggcggcggcgtcgcgaggagcatcgccgacatggtacgcgctcgtataccgtatcgcctccccctcttcttggattcctctagctagctttgcatccccaccacctgaggatcggtattcagtgttcttctctgaacttttggctgtcctagttttgggtttacctctatgatcctgtcggtcaaagaaaacggtgggctgtgaggacagtgataatctgactaagataggtggctttacctaccaagtagattaattatttaatttcacttgtgtgctggaatttctgactaggtgtgtgatctttcgagactattgtttgactaatggcatagaggtgttcaggaatggcctttggccagaagcccagaactagttattcatattcatatgaactcctgattttttttcttaactctgcatcttttcctgttacttagttcttaagggattcactttgccaaatgtcaattgtatagattattaggttgcaaattattactatggttatttatttgcttttgttttaaacacaggcgtggccaacaaaatgcacatggttaccctggccaacctgtgggaagagccattcatatactcttgtttccaaataccacaagatctggaaggcaagattgctctccttttaatattcagtttattttcattgcgacaattttttttttagcaatttgtctgttcattttcaggatacaaaggaggctgtttctgcaaaagatgtttccagaaaagaaccaattactggtgtgattgcattgaaggcttccatgaagtacttcgatgctgattttttcaacgattcaaaagtactatcaaaatgttatttgaagttttcacaaccaagtagttgcattaatatcttttttatctacacttctatctgttctgttagcttcgggagatggaagatggtgcaaaagaatttaatgtacctgcatttagagacaaccggaaattggtggcgttagagaatggtggattgcataacccgtctgcattggtctttaaatcatcatggagcgatgaaagcaaaatcagtgagaacaaaagctttcaatatccccatacatcttcagtacatcgccctagtaaagatgaagatattgcttttatgtcggtcagtttattttttaacaattgttattatacattggttacaaacttcatatatatttatttcaaacttctgatcttcatatcagataattgagctcggggagcttataaggacaaagcaagtcacatcgcgtgaacttactgctgtgttcttaaggagattaaagaggttagacccctttttctgtcttcctcatttgtttcagtctttcagatggacttatgagaggctcagaagtattgtttttaatcatgtaactccttgtatgtttataggtatggtcctataatcgaatccgttattactatcactgatgatttagcatacaaacaagcgaaagaagctgatgacttgctggagcaaggaaaatatcttggtatgcagtaaatcttcttgaaatgctcagtgatatatctgttactgcaatacaatctagtcttgatcttgtttctctccttttgttggtaatatattatggccatagcagcttcctgtcataattgatgctcgtggaaattaccctacatttttttattattatgcaccattgaagcttcatattttgcgatgcaatcacttttattagcctgagaacctgtggaacgaaatgttaaacaactggtatttttttagttgaatccatgtgtgtgttacaaagggggagttctctcctttgtttgcctttaaaaaatctctcagttataccattagtagggtactctttaggtgagtcgtactagaagaaaatgtgttacatataaaacattatgctcaaaagtaaagattgcattgacaaatattgatattaggtcccttacatggcattccgtatggccttaaggatataattgcagtaccagaatacaaaactacctggggctcaagaacttttgaaaaccaaattcttgatgtcgaagcctctgtctacaaaaggtttgtttcttctcagttatgtgtgagtcatgtgatcaattctaattacgtctccttatgtgtatgccgtcctccttcagattgaagtcaactggggcagtccttgtagcaaaacttgtaacaggctcgctcgcctatgatgatatatggtttggggggagaacaagaaacccctggaacattgaggagttttctactggttcatcagcagggccagcagctagcacctctgcaggttaatttatacaacatgtttacatgtgtaaggagatgaagtatatatggtcaagtactcagcgaagttttttcattgcactaggaatggttccttttgcaataggttcagaaactgcaggttccataacatatcctgccgctagatgtggagtaactgctttgcgcacaacatttggaacagttgcacggacgggcgtcatgagcatttcagagagcttggtatttccattcaaaagtcttacgctttcccagtcatatccaaatcaatcttttaaacaattagtatcttggtctaaatggcaggataaacttggtcctttctgcagaagcgcgatagattgcgcagttgtacttgacgcaattcgcggcaaggatgccggcgatccatcatctcgtgaagttgctatcgaggatccctttcatgttgacatcagacaactcactgttggatatcttgacagtgctgagatggaggtaattgagagcttttttacgtgcatcagcctggttatctgttacccattcctgatctgatccttcgatttgatcattgctacaggttgttcatgttctttccgctaagggtgttaagctagtgcctttcaagctgaactacaccgttcaatcggtccaatccatactgaacatcaccatggatgttgacatgcttgcgcatttcgacaactggcaacgcgagcgacacgacgacgactatgaagctcaggaccaatggccagtggagcttcgccgcgcacggttaatccccgcagtcgactatatacaggtgctctactaaccatatctgaaggagtgtacctgtctataggatcgcgagtcaccataacttatattcttgttctttgatcgatgaacaggcacaacgagcacggggtaaactgatcagagaagtcagggagagcttcacggtcgatgcattcatcggcaatgtgaccgactgggagctcgtctgtcttggaaaccttgtggggatgccggtggctgtggtgccgacaggcttgaagagcatcaagaacccaccagaaggcggcacgcggagaagaaccaccgtgacgacgggcatatacgctcctcctgaccatgaccacgttgtaagttctttctcgtctcaggacataaacattttatgtgttgacatgaagaacagtgatgatgagttgatgacctgtcattttgatccgtgcattggggagcaggctctagctctggcaatggcgtaccagtctgtgactgaccaccacaaacaacgcccagcgatcgacgatctaggaccgggagatgacatacagcggtaagcagtggctggatgacgatgatggtgtattttcatgaaagctgaagttccagatgattgaccactgtgttaatttccttgagaaacatgagatgtaatatatatgaacttacagaatttgtctcagttgcgagtcatttgagaaagtaacaggactcatcagatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0536800, RefSeq:Os11g0536800