Os11g0538400

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0538400| Description = Cyclin-like F-box domain containing protein| Version = NM_001189650.1 GI:297728430 GeneID:9272260| Length = 2741 bp|...")
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Gene Name

Os11g0538400

Description

Cyclin-like F-box domain containing protein

Version

NM_001189650.1 GI:297728430 GeneID:9272260

Length

2741 bp

Definition

Oryza sativa Japonica Group Os11g0538400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21463107..21465847

Sequence Coding Region

21463712..21465673

Expression

GEO Profiles:Os11g0538400

Genome Context

<gbrowseImage1> name=NC_008404:21463107..21465847 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21463107..21465847 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgcgctcatgctgcacctccccgtgctccacgagcgcgtcaccgtggagttcgacgaggtggacggggatgtggacgtgcctggcctgccgcgcctctgccgccagcgtccatgccgtgccgtgcccgatggtggacaagaagagccccaactacacgtggttcgtgcgcctcggcgaccgcttcatggacgccacgggcatcatcgcgaacaccgccgaggcgccgacgagctcgaaccggccgggtcccctcgccaccatcgcggacagtcggtgcgtgcaggggcgaaccgcatctccgatctccccgacgacctcatccagcgcatcctccacttcgcgccggcgagggaggccgcgtccaccggcctcctctcctcccgctggcgctcgctctggcgctccaccggcgccgtcaacctcgccgtcctcgtccgccgccgcgacgacttcttctccctccgcgacgcgttcgtccgctccgcccacgccgcgctcgccgccgccgccggcggccacgtcaggaggctcaccatgcacgtggagacggagcgcctccccgtgcagctgacggccgacgcgttcctgcaccgcgacgcggaggactgggggaggaggcacgacgtggtcgccggcgtcgtgtcccacccggcggcgcgccgcgtcgaggagctccgcgtcgccgccgtcaggtccgccgacgggccgtcgtccgacagggaggtcacggagatggaagaaggggagttccacctctccctcggcggcagcggcggcacccagccgtcgacggagacgctccgcgtgctcgacctcaccgggtgcggcggcgtctccctccccgccggcgcggcgctcccgcggctgacgacgctgcggctgcggctgtgcgtcgtgcaggtcgaggacctgcagggcgtcgtcgactccgcgccggcgctcgccaccgtgcacctcgagtccgtcttcctcgccgggacgaaagaagacggctgctgcgcccgcctccgcttccccgcggccaccgcgctcgtgctggccaagtgcaggggccacgggagccaccacaacggcgacgacgacgccagcgactgcgagggcgccatggagatcgacgcgccgaggctccgatcgttcaagtacacggggctgccccggcggttctcgctcatctcgccggcggcggacatggaacgcgcggacctgcacttcctccacgacgacgggcctcaccactaccgcgacaccaccgccgtgctccgcgcgcgcttctggcgcttcctccacaacttccgcggcgtcaagtccctcaagctgaaggtgacctacctcaaggcgatcgccgtcaccggcaacggcaaaggcatcctcctcccgccgctccatggcgtcgagcgcctcgacgtcgccgcgctgcacgacccggcgagcgagacgtccacggtggccatcgccaacctgctccgctgctgccccaacctccgcgacctcgtgctccgcctcagcacggtgccgccggattccaccaagaacggcggctactgccgcgacgtcctgcggaggcgctggcaggcggacctcgacgagtcggtccaccgcctcgcccgccggcgaggctggccgaagccgccgccgccgccgccgccgacaaagatctcctgcatgaaccaaagcctggacgatgccggcggtgacatccatggattgagcggccgatccttcgcctgcttgcgaagctcgttgacaagggttgggatccagttccggaacgacgagcgcagctggcttggcgtctcgctgatcaagttcttcgcggagaacgccatttgcctcgaggagatgcgcgtcgatggagggaacgagaggatgcgcgatcacatcaatcgtagggttgagagatggatcgttgagagtggcatgcgatgctttagagtgttaccgcttgagcggcgatga</cdnaseq>

Protein Sequence

<aaseq>MLALMLHLPVLHERVTVEFDEVDGDVDVPGLPRLCRQRPCRAVP DGGQEEPQLHVVRAPRRPLHGRHGHHREHRRGADELEPAGSPRHHRGQSVRAGANRIS DLPDDLIQRILHFAPAREAASTGLLSSRWRSLWRSTGAVNLAVLVRRRDDFFSLRDAF VRSAHAALAAAAGGHVRRLTMHVETERLPVQLTADAFLHRDAEDWGRRHDVVAGVVSH PAARRVEELRVAAVRSADGPSSDREVTEMEEGEFHLSLGGSGGTQPSTETLRVLDLTG CGGVSLPAGAALPRLTTLRLRLCVVQVEDLQGVVDSAPALATVHLESVFLAGTKEDGC CARLRFPAATALVLAKCRGHGSHHNGDDDASDCEGAMEIDAPRLRSFKYTGLPRRFSL ISPAADMERADLHFLHDDGPHHYRDTTAVLRARFWRFLHNFRGVKSLKLKVTYLKAIA VTGNGKGILLPPLHGVERLDVAALHDPASETSTVAIANLLRCCPNLRDLVLRLSTVPP DSTKNGGYCRDVLRRRWQADLDESVHRLARRRGWPKPPPPPPPTKISCMNQSLDDAGG DIHGLSGRSFACLRSSLTRVGIQFRNDERSWLGVSLIKFFAENAICLEEMRVDGGNER MRDHINRRVERWIVESGMRCFRVLPLERR</aaseq>

Gene Sequence

<dnaseqindica>606..2567#aaagttagcctcatcaattagcagcgtgaggaggatacagatcaatacatggcggcgggagcagccgtgcacgtcgtcaggcggccgccgctacagatcagccggtggtgtacacggtgtggaagaggtccagcataggcttccagggcaccgatggcttctccgtctacgactccgccggcaagctcgcgttccgtgtcgacaaaactactaccaccgccgcaaagctttcgccggcgacctactgcttaaggatggccacggcccacggcacgcctcttctctccctcaagccacaggtcaatcatctttccattcacttcattaattcttttctagctactcgtatatcgctttagcagcagcctgtttactgatcgatcagatcatgagtttagtttactagtttggaatcatgtatcttaagatcagctcagcgtggaggagttcatcgcgcggtacatccagctagctgcacgcgccacacgtcagggacgccgtcgctgcactcgtgctcgacatgttcaccgcgcccatagtcgacgtggcgtgcgacctcggcgtgctgtcctacgtgttcatgtcgtccaccagcggccagcaccatgctcgcgctcatgctgcacctccccgtgctccacgagcgcgtcaccgtggagttcgacgaggtggacggggatgtggacgtgcctggcctgccgcgcctctgccgccagcgtccatgccgtgccgtgcccgatggtggacaagaagagccccaactacacgtggttcgtgcgcctcggcgaccgcttcatggacgccacgggcatcatcgcgaacaccgccgaggcgccgacgagctcgaaccggccgggtcccctcgccaccatcgcggacagtcggtgcgtgcaggggcgaaccgcatctccgatctccccgacgacctcatccagcgcatcctccacttcgcgccggcgagggaggccgcgtccaccggcctcctctcctcccgctggcgctcgctctggcgctccaccggcgccgtcaacctcgccgtcctcgtccgccgccgcgacgacttcttctccctccgcgacgcgttcgtccgctccgcccacgccgcgctcgccgccgccgccggcggccacgtcaggaggctcaccatgcacgtggagacggagcgcctccccgtgcagctgacggccgacgcgttcctgcaccgcgacgcggaggactgggggaggaggcacgacgtggtcgccggcgtcgtgtcccacccggcggcgcgccgcgtcgaggagctccgcgtcgccgccgtcaggtccgccgacgggccgtcgtccgacagggaggtcacggagatggaagaaggggagttccacctctccctcggcggcagcggcggcacccagccgtcgacggagacgctccgcgtgctcgacctcaccgggtgcggcggcgtctccctccccgccggcgcggcgctcccgcggctgacgacgctgcggctgcggctgtgcgtcgtgcaggtcgaggacctgcagggcgtcgtcgactccgcgccggcgctcgccaccgtgcacctcgagtccgtcttcctcgccgggacgaaagaagacggctgctgcgcccgcctccgcttccccgcggccaccgcgctcgtgctggccaagtgcaggggccacgggagccaccacaacggcgacgacgacgccagcgactgcgagggcgccatggagatcgacgcgccgaggctccgatcgttcaagtacacggggctgccccggcggttctcgctcatctcgccggcggcggacatggaacgcgcggacctgcacttcctccacgacgacgggcctcaccactaccgcgacaccaccgccgtgctccgcgcgcgcttctggcgcttcctccacaacttccgcggcgtcaagtccctcaagctgaaggtgacctacctcaaggcgatcgccgtcaccggcaacggcaaaggcatcctcctcccgccgctccatggcgtcgagcgcctcgacgtcgccgcgctgcacgacccggcgagcgagacgtccacggtggccatcgccaacctgctccgctgctgccccaacctccgcgacctcgtgctccgcctcagcacggtgccgccggattccaccaagaacggcggctactgccgcgacgtcctgcggaggcgctggcaggcggacctcgacgagtcggtccaccgcctcgcccgccggcgaggctggccgaagccgccgccgccgccgccgccgacaaagatctcctgcatgaaccaaagcctggacgatgccggcggtgacatccatggattgagcggccgatccttcgcctgcttgcgaagctcgttgacaagggttgggatccagttccggaacgacgagcgcagctggcttggcgtctcgctgatcaagttcttcgcggagaacgccatttgcctcgaggagatgcgcgtcgatggagggaacgagaggatgcgcgatcacatcaatcgtagggttgagagatggatcgttgagagtggcatgcgatgctttagagtgttaccgcttgagcggcgatgaaattaggagagatggattattgcaaacttgcaagtgactgaaattaatcaaggtcttgataagttgtgtgttgcaaataaaatgcgggttttttttttctagcttgttatcttcagtgataaaagaatgtcgttttaaattggtgtagtacaaaatatagattttggatatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0538400, RefSeq:Os11g0538400