Os11g0543300

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0543300| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001074575.1 GI:115485798 GeneID:4350673| Leng...")
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Gene Name

Os11g0543300

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001074575.1 GI:115485798 GeneID:4350673

Length

3429 bp

Definition

Oryza sativa Japonica Group Os11g0543300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21818613..21822041

Sequence Coding Region

21818613..21819311,21821232..21822041

Expression

GEO Profiles:Os11g0543300

Genome Context

<gbrowseImage1> name=NC_008404:21818613..21822041 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21818613..21822041 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatcacggtggccggcggcgccggcgacggcggcgagaggcggacgtgggtggtggaggtggagaggacgctgcacgacgcgcccgacgcggcggcggaggcgtcgcggtggcggccccactgcatctaccgcgtcccggcgtgcatcaaggacctcaagccgaaggcctaccagccgcaggtggtgtcgctcggccccttccaccacggcgaccccgggctggcccccatggaggagcacaagcgccgcgccctgcgccacctcctccgccgcgcggcgcgcccgctggccgacttcgtcgccgccgtcgaggccgtcgccgaccgcctcgaggccgcctacctcgacctcggcggcggctggcgcggcggcggcggcgacggcggcgaggcgagggagaggttcttggagatgatgatcgtggacgggtgcttccttctcgaggtgatgagggcggcggcggcggtgtcgccggcgacgccggcgccggcggctgcggggaagccgcacgcggcggcggaggaggactacgcggagaacgacccggtgttcagccgccatggcgtgctgtacatggtgccgtacatccgccgcgacatgctcatgctcgagaaccagctgccgctgctggtgctggagaggctcctgttcgtcgagaccgagagggctaatgtcgtccattcgcgagtttcgaacgaggaccacatcaaccggatggtgctgcgcttcctgtcgccgtcggcgcggacgccggcgctggggacgccgctgggtcaccacccgctggacgcgctccggcggagcatgctgcacggcgagtaccagtcgccgcgctgggggcacggcgcgggcgcccgcgcccaccaccgcgacatcatccgccccgccgcctacgccgacgacggcggcggcgacatcatccgctccgccgtggagctctacgaggccgggatccgcttccggcgcgcccgcaccgacagcctccacgacgtgcggttccgccacggcgtgctcgcgatgccgcccgtcgccgtcgacgactccaccgagtacatgctcctcaacatgatggcgttcgagcgcctccacccgggcgccggcaacgacgtcaccgcctacgtcttcttcatggacagcatcatcgactcggccaaggacgtcgcgctgctgtcgtccaaggggatcatccagaacgccgtgggcagcgacaaggcggtggcgaagctgttcaacagcatatccaaggacgtggtgctggagccggagagcgcgctcgacggcgtgcagcggcaggtgaacgcctactgccggcagccgtggaacatgtggagggcgaacctgatccacacgtacttcaggagcccctgggcgttcatgtcgctcgccgccgccatgttcctcctcgtcatgaccatcatgcagacggtctacaccgtgatgtcgttctaccagcaggcggaagggggcggcggcggcggatcggcggcgccgtctccgatgtga</cdnaseq>

Protein Sequence

<aaseq>MDITVAGGAGDGGERRTWVVEVERTLHDAPDAAAEASRWRPHCI YRVPACIKDLKPKAYQPQVVSLGPFHHGDPGLAPMEEHKRRALRHLLRRAARPLADFV AAVEAVADRLEAAYLDLGGGWRGGGGDGGEARERFLEMMIVDGCFLLEVMRAAAAVSP ATPAPAAAGKPHAAAEEDYAENDPVFSRHGVLYMVPYIRRDMLMLENQLPLLVLERLL FVETERANVVHSRVSNEDHINRMVLRFLSPSARTPALGTPLGHHPLDALRRSMLHGEY QSPRWGHGAGARAHHRDIIRPAAYADDGGGDIIRSAVELYEAGIRFRRARTDSLHDVR FRHGVLAMPPVAVDDSTEYMLLNMMAFERLHPGAGNDVTAYVFFMDSIIDSAKDVALL SSKGIIQNAVGSDKAVAKLFNSISKDVVLEPESALDGVQRQVNAYCRQPWNMWRANLI HTYFRSPWAFMSLAAAMFLLVMTIMQTVYTVMSFYQQAEGGGGGGSAAPSPM</aaseq>

Gene Sequence

<dnaseqindica>1..699#2620..3429#atggacatcacggtggccggcggcgccggcgacggcggcgagaggcggacgtgggtggtggaggtggagaggacgctgcacgacgcgcccgacgcggcggcggaggcgtcgcggtggcggccccactgcatctaccgcgtcccggcgtgcatcaaggacctcaagccgaaggcctaccagccgcaggtggtgtcgctcggccccttccaccacggcgaccccgggctggcccccatggaggagcacaagcgccgcgccctgcgccacctcctccgccgcgcggcgcgcccgctggccgacttcgtcgccgccgtcgaggccgtcgccgaccgcctcgaggccgcctacctcgacctcggcggcggctggcgcggcggcggcggcgacggcggcgaggcgagggagaggttcttggagatgatgatcgtggacgggtgcttccttctcgaggtgatgagggcggcggcggcggtgtcgccggcgacgccggcgccggcggctgcggggaagccgcacgcggcggcggaggaggactacgcggagaacgacccggtgttcagccgccatggcgtgctgtacatggtgccgtacatccgccgcgacatgctcatgctcgagaaccagctgccgctgctggtgctggagaggctcctgttcgtcgagaccgagagggctaatgtcgtccattcgcgagtttcggtaatttctacacggtttcgctatttcacttgcataattttattttgtgtgtttttggatttttcgtccatacgttcttacatcaagattcgtgttcttgtacatttaacttaggttcttacatcaatttctacacttaggctgtgttcgggagtgagggtttcccgacacgcaaaacgaagccacgtttaacgtgcgattaattaagttttagctaattttttttcaaaaaaatagatcaatatgatttttttaaataactttcatgtagaaactttttgtaaaaaatgcaccgtttaacagtttgaaagacgtgcgcgtgaaaaataagagggaggggttgagaacccctgcaaatgcagccttttgtagagcactcatgttcgttgagaccgagaggtccagtgtacgagtttcggtaaactctacgtcatccaaaatataccaactgcatcgattgcagcttaccagttaaagctaaaatttaaaatttaaaacttaatttaataaattaacttgaggcaaagagaaaaagtttcatgctacaatctagctaggagtataataatctagcataataatctacttgtttgtttcagcttacttctaataatccagattataataatcctaagctgaatcaaacaggttctaagttaagttcagcctaggtttgaaaacgagaattgaatgtaacgaaatcatgacacaacatataattagcgaaaaatgtgtttcattttcgatataagtgtgttcaaaatgagagtttaaagtaacgagacgagatcgcaagtggatctagtgggtggtgcatgaaaaaaaatcctaacctaatgcatatatactcgtttttaatatagtatgatgtatatttgatccgtttatacttttaactttgttatattctttagggtattttaaaacaattatataagttgaatcatcaatataaaaattctagatatgtcactagatgagatgactaataactggcgaaattgtgtgctaatttagtgtagagcacactgtacatgaattgcattaggcagcttgtcacgttatctaggtacgttcacctcatgagagatttgctttctcattgcaccgtgatgcaaagcaaaaggctaattaagttgcatataaagtagtatatctgaaaattctttccttgttgacatcacatcacaactatcaaagggcactctttatctttagtgcaacattgtttgactaaagcataattaactactcgatgtggtagataattaaaactaaaccatatataaatatcagcagacacaacatcagaactaatcatgaccatgtcagggtttactatttcactatgcacaaatccgcaggggatcggaaatttcaaaatatttttgtcaaaatagaatttgaataaatcttgaacaaatttaaatagttttcgctaaattcaaaaaaaattcgggcggaatagtttcaaaattcccagaattttaaaaattttcgtactgaaattgcaaaccatggcgatgggattggaccgatatttccgaaattcctgaaaatacggaaatttcattacagaagtatcaaaccattgtgtaggttggaccgttttcccgaaattgcaggtttaccggttgctctgacaattgcagtttgatgttcaaagcttaccattcgaaatttccaaattttgtttcggtctccctggatacattccgaaatattgaatcctgatgaatgatgatgcatgcatacgcaacatttcggagtgtacctaccagttgctctgaccatttcgcttgtttagtctagcaaaaacttatcaaatttaaagaaatttgtttgaagtccaaaattgaccgttcaaaatttccaaatattatttcgaaatctttttgattgatccttgcacatggccagaacgaggaccacatcaaccggatggtgctgcgcttcctgtcgccgtcggcgcggacgccggcgctggggacgccgctgggtcaccacccgctggacgcgctccggcggagcatgctgcacggcgagtaccagtcgccgcgctgggggcacggcgcgggcgcccgcgcccaccaccgcgacatcatccgccccgccgcctacgccgacgacggcggcggcgacatcatccgctccgccgtggagctctacgaggccgggatccgcttccggcgcgcccgcaccgacagcctccacgacgtgcggttccgccacggcgtgctcgcgatgccgcccgtcgccgtcgacgactccaccgagtacatgctcctcaacatgatggcgttcgagcgcctccacccgggcgccggcaacgacgtcaccgcctacgtcttcttcatggacagcatcatcgactcggccaaggacgtcgcgctgctgtcgtccaaggggatcatccagaacgccgtgggcagcgacaaggcggtggcgaagctgttcaacagcatatccaaggacgtggtgctggagccggagagcgcgctcgacggcgtgcagcggcaggtgaacgcctactgccggcagccgtggaacatgtggagggcgaacctgatccacacgtacttcaggagcccctgggcgttcatgtcgctcgccgccgccatgttcctcctcgtcatgaccatcatgcagacggtctacaccgtgatgtcgttctaccagcaggcggaagggggcggcggcggcggatcggcggcgccgtctccgatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0543300, RefSeq:Os11g0543300