Os11g0545000

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Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0545000| Description = Conserved hypothetical protein| Version = NM_001074589.1 GI:115485826 GeneID:4350687| Length = 3928 bp| Definition ...")
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Gene Name

Os11g0545000

Description

Conserved hypothetical protein

Version

NM_001074589.1 GI:115485826 GeneID:4350687

Length

3928 bp

Definition

Oryza sativa Japonica Group Os11g0545000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21913705..21917632

Sequence Coding Region

21913998..21914210,21914297..21914491,21914783..21914959,21915376..21915543,21916404..21916445
,21916543..21916658,21917492..21917603

Expression

GEO Profiles:Os11g0545000

Genome Context

<gbrowseImage1> name=NC_008404:21913705..21917632 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21913705..21917632 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccaagcggcgtcgcggggttcgcccccctcctcccgatccttccccggctccggcgacaatcgactatagccttacttataaggagatagccgccagtggggctccaggtgctgtggactttgtgaagaatcatggcttgtacttgctgctgcttgagacaccctctggcttctcaattttctctctttgtggggtctacatccacttaccagatgcgatacaaaatatttgggcgatgttcggtacttacaggtcttcacatgacgttatctggctgaaggaatttcagaaatttgatgacaagtctagcgccattaatgttgatactggtgttaacaaacagcttactgagatgatcatgaagtggcgtcgccctaggcagaaattggttgttggaaagccggagtataaatcaatcattgaaaataccttaggaataccctgcctgtgtgatgaagttgtgatggacgtaatgtgggccatgaagcgtctcattcgctattttgtgcccactgaaacacccgagctggctgaagaggacagcctcactatgagtcaaggactacggatgtttttaagtcgttatggctttgaaatcaaaccagagatggtctacaacgatattgttcgtgctgcatccatcgtgtttaggtgtgatgctgttgaggacctttacgagcacttgcaacatcttggtcgccacctcaagaatgtgtctggcattgactatgagaattggggcactgtgaaactcgcgacagcttttaagatcatatgcagccgcaaaattgataaatctgatgagatgttttcagacgacgtgcgatcgaagttgctggatgatgcagataaatacaaagatcttgttttttcgacaggttgcattgcaaactataaaaaaattttaggtctcaatatactcaggaatgataaaatggatcaattggctgagttggttaaggtagctaggattaaagctgaacacgtgagggtgcctgagaatgtgcctgagaactaa</cdnaseq>

Protein Sequence

<aaseq>MPKRRRGVRPPPPDPSPAPATIDYSLTYKEIAASGAPGAVDFVK NHGLYLLLLETPSGFSIFSLCGVYIHLPDAIQNIWAMFGTYRSSHDVIWLKEFQKFDD KSSAINVDTGVNKQLTEMIMKWRRPRQKLVVGKPEYKSIIENTLGIPCLCDEVVMDVM WAMKRLIRYFVPTETPELAEEDSLTMSQGLRMFLSRYGFEIKPEMVYNDIVRAASIVF RCDAVEDLYEHLQHLGRHLKNVSGIDYENWGTVKLATAFKIICSRKIDKSDEMFSDDV RSKLLDDADKYKDLVFSTGCIANYKKILGLNILRNDKMDQLAELVKVARIKAEHVRVP ENVPEN</aaseq>

Gene Sequence

<dnaseqindica>3423..3635#3142..3336#2674..2850#2090..2257#1188..1229#975..1090#30..141#aagacgcgcgtccgccgccgcaactagcaatgcccaagcggcgtcgcggggttcgcccccctcctcccgatccttccccggctccggcgacaatcgactatagccttacttataaggagatagccgccagtggggctccaggtgagcccgtcccgtcgatatatctatctatttgtcatccgctctcgatctctcaatttcacacgcctttaggtaggagcgatgacaatggaacttgaaaccctacactacaccagatgcacacacatacatacatacatacatgccgtgggggaacacactgtgactgtagatcttggcgaggcgaattgatttcatttccaccttacaagtgttagggttcgtggattcgatttgggggtgcagggtggtgtgtgcacatgtgtgggttagaatattgttatgtttgtggtggttttcgcggatctggactggagaaggggagggcctttatttcgattttgctatatctcactcgaaagattttttttgttatctctcacacgattctcactcaaatttacagggtattttcttgtaagttacagtgtaatttatgaaatttacattgtaacttttgtaagttacagtgtaatttttgaatctttgtatgtaagttttgaaatttatattggatttggtttttttttaagatatggcaatttagtgtccattatggtgtttttagttgctttttaccttttactgtgtctattctgtgtgatatgatcataaaaatctttcgaaagatgcatatttactcccccgtacttttcccttggtaatccagtttgcttactcaattttgctccacttctgtgtcgttcacagtgtctattctgtgtgatatgatcataaaaatcttcgaaagatgcatatttactccctcgtacttttcccttggtaatccagcttgcttactcaattttgctccacttctgtgtcgttcacaggtgctgtggactttgtgaagaatcatggcttgtacttgctgctgcttgagacaccctctggcttctcaattttctctctttgtggggtctacatccacttaccagatgcgatacaagtaggagtacttctatcttccttctttcctttttggttaaataatataatatatgtgctagcttactcctgtcgttgtgttcctttatattatccagaatatttgggcgatgttcggtacttacaggtcttcacatgacgtgagtggcccttctttcgtttccttcccattgttttgttgccaaatcaattagtagcaatgttgcatcatttgtgattgatgcattctttttcttttttctgtttgtgtcgagggagcgtaaacacaatcttctggtttattatcatgctcaaaaacatttccaaactccccccccccccaaatttctccatgtaaatcatatgccctaaaattgcttacctgctactctctctgtttcatattgtaagtcgttttgactttttttcctagttaatattttaagtttgaccaagtttttagacatataataacattttcaacacaaaacaaacatattataaaaatatattcaacgatacatttaatggaactaatttagtgtagtagatattgctattttttcttataaacttggtcaaacgtaaaaaagtttgatttaaaataaagtcaaaatgacttgtaatatgagacggagtgagtaattgctagtagcttggaatgattgagaaagtcactgtattcgagcgagtgaggcaacacaacatgagatggataacacgtgattaagggagaatatcacaaggaaattggcaagataaaaggaaaagatgataaaaaggcccactaggcatcaacatcagcttaacaaccattctgtgttttattttcaaatacacgttgtcaccttagcatatgaaacttttctgaattacactgtaaagatgtgataaacaagggcttgaatgagggtattttagatgtacctgctgaactgagactgattgagacatttcatgataattggttaattatttctttctgcctctcaacgtgctcatctttgtctttctttaccaggttatctggctgaaggaatttcagaaatttgatgacaagtctagcgccattaatgttgatactggtgttaacaaacagcttactgagatgatcatgaagtggcgtcgccctaggcagaaattggttgttggaaagccggagtataaatcaatcattgaaaataccttagtgagtaaatataagaccctcttttagatgggacgaaaactttcaagtccctatcacatcagatgtttggatactaattataaatattaaacgtagactattaataaaatccatccgtaatcttggactaattcgccagacgaatctattgagtctaattaatccatgattagcctatgtgatgctacagtaatcattctctaattatagattaattagtcttaaaaaatttgtctcgcaaattagcttttatttatgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaatacagagactaaagttaaatccctggatccaaacaccacctaagctccttgtttgcctatatatgcgaacaactttgagcttcatttcttattgtttcttttttcagggaataccctgcctgtgtgatgaagttgtgatggacgtaatgtgggccatgaagcgtctcattcgctattttgtgcccactgaaacacccgagctggctgaagaggacagcctcactatgagtcaaggactacggatgtttttaagtcgttatggctttgaaatcaaaccagagatggtgagtttacatgctctgatttatatagatcccctatcatttagtttctgtttggttggtagccattgaatgccacagcaacagtgtttttgccacagcacagtgatttctaaggcgggaaaaggtccgccataggtctgtggcgagccgcgctgtggcgtggcaatgtttggctgtgatccaaacagagccttagtgttacattttataatggcttgtgagcacacttggaatccttcattttttcttttagtgatgaagcaacgctcttaattgatttgtatccaacaggtctacaacgatattgttcgtgctgcatccatcgtgtttaggtgtgatgctgttgaggacctttacgagcacttgcaacatcttggtcgccacctcaagaatgtgtctggcattgactatgagaattggggcactgtgaaactcgcgacagcttttaagatcatatgcagccgcaaaattgataaatctgatgaggtaaagccatatatactgaccatgtaaatgttatactgaccaggtaaagcctatctgatgaggtttgtgccttgtctctcttgcagatgttttcagacgacgtgcgatcgaagttgctggatgatgcagataaatacaaagatcttgttttttcgacaggttgcattgcaaactataaaaaaattttaggtctcaatatactcaggaatgataaaatggatcaattggctgagttggttaaggtagctaggattaaagctgaacacgtgagggtgcctgagaatgtgcctgagaactaagatcactacaagcttgctcaatatctcgctgaacctcttgcaggctaaataatttggtttgccagttaggaagcgtttggtatgcatgtggcttaatccagattcttctgagtgtcgaggttgtgatctcggttggcttaaacattattgtgcatcttttgtaaatctagtctggtatttgagaagctaaggtccgtgctatccaaaactttgcatcgtttagctgtcaaacaaatgaccgtgctcagtggtgattaacgtgctctgtgatgaatgacgatcttgatttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0545000, RefSeq:Os11g0545000