Os11g0544800

From RiceWiki
Revision as of 09:12, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0544800| Description = Similar to Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.-) (Fragment)| Version = NM_001074588.1 GI:1154858...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0544800

Description

Similar to Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.-) (Fragment)

Version

NM_001074588.1 GI:115485824 GeneID:4350686

Length

4575 bp

Definition

Oryza sativa Japonica Group Os11g0544800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21898748..21903322

Sequence Coding Region

21898837..21898917,21899003..21899119,21899506..21899574,21899793..21899990,21900259..21900462
,21900559..21900699,21901287..21901496,21902201..21902815

Expression

GEO Profiles:Os11g0544800

Genome Context

<gbrowseImage1> name=NC_008404:21898748..21903322 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21898748..21903322 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcactgacccttctcagagggatgcgaacgccggttgtagctagaaggaatgctggcttgttcttcaccacattgcagtctccgttgttgtcccgcttcacgatgagagcggagagcgcgcgggccgcagcgcccaagtcgattcagctggcgaccaaggaggcggcggagcagaaggcgcagggcttcgaggcggtcatcgggatcgagacccatgtccagctctcgacggtcacaaaggcgttctgctcgtgcccgtacagctacgggtcgcagccgaacagcaccgtctgccccacctgcatggggcaccccggaacgctgcccgttcttaacgcaaaggttgtcgaatgcgccgtgaggttgggcctcgctctcaattgcgagatcgcgatgacgtccaagtttgatcggaagcagtacttctacccggacctgcccaaggggtatcagatttcgcagtttgacattcccattgccaaggagggttaccttgatttggatcttccggtggagttcggcggtgggcataggagatttggggtcacaagggtgcatatggaagaagatgctggcaagctgcttcactctgaatccgggagttactctcaggttgacttaaatagggctggcgttcctttacttgaaattgtctcagagccagatatgagaacagggatagaggctgccgagtatggtgctgagctacagaggcttgttaggtacctgggcgtgagtaatggtaacatgcaggaaggttcccttcgctgtgatgtgaatgtttctgttcggccaattggacaatcaaattttggtacaaaggttgaaataaagaatatgaattcattttctgcaataagtagggcaatagattatgagatctcccggcagattcttcttcataaagaaggtcaggctgatcaaattgtacaagaaacccggctgtgggatgaatcttctcagaaaacttttacaatgcgaaaaaaggagggacttgctgattatagatattttcctgagcctgatcttcctgaagttgttcttactagtgagtacattgatgaaattcaaaactcaatgccagagcttcctgaagcaaagcgtaggcgcttcgagaatatgggactcagcatgcaagatgttcttttccttgctaatgacgataatgttgctcggttcttcgattctacccttgagcacggcgcggatgcaaagctggctgccaactggatcatgggtgacattgctgcttatttgaaaaatgaaaaactttccattgatgaaattaaattaacacctctggagctttctgaattgattgcatctataaggaatggaactatcagtgggaagattggaaaggagattctgattgaactcattgcgaaaggtggaactgtcaagtctgtgatagaggagaaagatttggttcagatagcagatcctgcagcaattgaggcaatggtagatcaagtattagctgataatccaaagcaacttgagcagtatcggtccgggaaaactaaattgcaaggattttttgctggccaggtgatgaaagcatcaaagggtaaagctaatcctgttttgttgaacaaaatcctcggggagaaattgaaggccaatagttga</cdnaseq>

Protein Sequence

<aaseq>MALTLLRGMRTPVVARRNAGLFFTTLQSPLLSRFTMRAESARAA APKSIQLATKEAAEQKAQGFEAVIGIETHVQLSTVTKAFCSCPYSYGSQPNSTVCPTC MGHPGTLPVLNAKVVECAVRLGLALNCEIAMTSKFDRKQYFYPDLPKGYQISQFDIPI AKEGYLDLDLPVEFGGGHRRFGVTRVHMEEDAGKLLHSESGSYSQVDLNRAGVPLLEI VSEPDMRTGIEAAEYGAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSNFGTKV EIKNMNSFSAISRAIDYEISRQILLHKEGQADQIVQETRLWDESSQKTFTMRKKEGLA DYRYFPEPDLPEVVLTSEYIDEIQNSMPELPEAKRRRFENMGLSMQDVLFLANDDNVA RFFDSTLEHGADAKLAANWIMGDIAAYLKNEKLSIDEIKLTPLELSELIASIRNGTIS GKIGKEILIELIAKGGTVKSVIEEKDLVQIADPAAIEAMVDQVLADNPKQLEQYRSGK TKLQGFFAGQVMKASKGKANPVLLNKILGEKLKANS</aaseq>

Gene Sequence

<dnaseqindica>4406..4486#4204..4320#3749..3817#3333..3530#2861..3064#2624..2764#1827..2036#508..1122#tttttcccactcccctctatccactgtttccgccgccgccgccgccgccgccgccgcccgccgcgccggcgttctccccccgccgacgaagcacggcgtggagtgtagacgcagcctcctcgctctctctcacgccggcgagcagggtctggagccaggagcgacgcggcggccggggccggggcctccatctcggttcgaaccgcactgaaggtatccccttcttctcctggcgcgccacttctcgagccggcgtagattggtggatgttcatccgccggggtggggttggacgggattagccccccccccccccccctctaattaattagattattattcttccccaatttcctttctctgatgatgatgcgtgcttgatagtacatttactaataaatagcagtttgtttccaagcaaatttgatgatgatgcgtgcttgatagtacatttactaataaatagcagtttggtaaatcaggtccctccctgcattagggcgcacaatggcactgacccttctcagagggatgcgaacgccggttgtagctagaaggaatgctggcttgttcttcaccacattgcagtctccgttgttgtcccgcttcacgatgagagcggagagcgcgcgggccgcagcgcccaagtcgattcagctggcgaccaaggaggcggcggagcagaaggcgcagggcttcgaggcggtcatcgggatcgagacccatgtccagctctcgacggtcacaaaggcgttctgctcgtgcccgtacagctacgggtcgcagccgaacagcaccgtctgccccacctgcatggggcaccccggaacgctgcccgttcttaacgcaaaggttgtcgaatgcgccgtgaggttgggcctcgctctcaattgcgagatcgcgatgacgtccaagtttgatcggaagcagtacttctacccggacctgcccaaggggtatcagatttcgcagtttgacattcccattgccaaggagggttaccttgatttggatcttccggtggagttcggcggtgggcataggagatttggggtcacaagggtgcatatggaagaagatgctggcaagctgcttcactctgaatccgggagttactctcaggttttccttgctgtccctgtcttgaataatatctatggaatctgtactctgttaagttgtcatgctattctgatgtgctgcataacatgactctgaaccacagaaacaattttggcatttacaacaatgtaatactccctccaggttgataatacttgtcgttttggacaagggcacggtctccaaaaaacaactttgaccattatttttcattataatatgtgtaaaattgttagcaaatatatgatcttattaaagtactttttaagactaatctatacatgtagtcaccatatttgaaagacaaatattttaaaaatgattcataatcaaagattctaaagtttgacttcacccttgtccaaaacgacaagtattatcagcccggagggagtagtagattttctaaaacaacccatccataaatgaaagatgggaaaccagggaagcaacttcctcaggagaagaattgtctcaaacctctgtctaggagtcaaaatatctactgatacaagggatttgatttcttataaatgtgagacaagaatgaacatattgataattgtgaagtctttcgcctgtcttcacacaaaactcaagaaaatgaagcacatttgtcctgaaaacagtaatgtaatagtttacagaagcagttattacacatataaactgattgatcagcgttttctattctgtttatctaggttgacttaaatagggctggcgttcctttacttgaaattgtctcagagccagatatgagaacagggatagaggctgccgagtatggtgctgagctacagaggcttgttaggtacctgggcgtgagtaatggtaacatgcaggaaggttcccttcgctgtgatgtgaatgtttctgttcggccaattggacaatcaaattttggtacaaaggtaatcatgagagctttagaacttccctagctgactgctatgctatgttcacatgttgctatcgatttcataattttatcatccaccagtgcaaaaacttatgtaaagagcatgttgtaagcccaaggttagacctgcaatctatcagtttcaaatgatgatatcactttatgtcaaaaaaatatatggattatcatgagtttttttccagccttgcatacagaattgacaagatatgctaattatgttgggacaatacatgatacattttagccatttggtgcaattcctgaaatgttcttccacttcggacatttgcttctctgaagggttggtcaggcatcctttgtgtatgtttgtcaattctctttgtgaaaattatagatttttcttttacttctaaatagcatgtcctaaagagaagtggtcatgggaaagattcagtgacataggacccggagactttaagcaaacatgaaggctacaatggaactgttttcaaagcgcaccattagttgtttgtcttattatgtgtattattattcactacttttatttcatcacatgcttctttcaatggctgccaggttgaaataaagaatatgaattcattttctgcaataagtagggcaatagattatgagatctcccggcagattcttcttcataaagaaggtcaggctgatcaaattgtacaagaaacccggctgtgggatgaatcttctcaggttactatgtctcactttgttaacttgtgtttccgcccattgtccttttgctaccatttctaaactctgctatttattgtttatttgcatcctcagaaaacttttacaatgcgaaaaaaggagggacttgctgattatagatattttcctgagcctgatcttcctgaagttgttcttactagtgagtacattgatgaaattcaaaactcaatgccagagcttcctgaagcaaagcgtaggcgcttcgagaatatgggactcagcatgcaagatgttcttttccttgctaatgacgataatgtaataatcttctgtattgttttcctttccccttgcgatggatgtggatatttactgcagttgattagatatctctgcattttaaaccaggaggaactcatcttgaactggttatttatttaaatgttttatttctcaggcttgcatgatcacgtagtgctttgttttttcattgaaaagtccctccagtttcttcttttcttggacaactcaatttctgcattgttcgcacagctttaacgaccttatctatgtatgttcctcccaggttgctcggttcttcgattctacccttgagcacggcgcggatgcaaagctggctgccaactggatcatgggtgacattgctgcttatttgaaaaatgaaaaactttccattgatgaaattaaattaacacctctggagctttctgaattgattgcatctataaggaatggaactatcagtgggaagattggaaaggaggtagatttgcctctatttcttctgactgttgtttctgtactgaatatgatggccaggactgagttttgactgttcttattatttctatctggagataggcacaaaaattaatttttgttctatcgttagtgctgcatgcctttcctgctattatctgtttctggtttaatcaccattagttagttttggataatgcatccttaaatctgtccttgcagattctgattgaactcattgcgaaaggtggaactgtcaagtctgtgatagaggagaaagatttggttcaggtaactgtagtcacctttcttaatttccagaaccatagtatataaatatgagtcatcctagtagttttctctcttttcctctttgcccttgctatatgaatattaccatgatggataaaagactatattattactcaatgtgagtatgaatgaatgaagggcatcacagtcatttagctactttctttttgtgcactagtctaaaactatttaggggtagtagggactagggaactagcaaataatgcatatgactgcctaagacattaaatgctggaaagcctgataatttttttgtgccatgtttgtctgcttttagttgatacaatttcaatgtgttggtttctggctgggctttttttgaggtggaaatttgttgtgctcagatagcagatcctgcagcaattgaggcaatggtagatcaagtattagctgataatccaaagcaacttgagcagtatcggtccgggaaaactaaattgcaaggattttttgctggccaggtttgtctattctgatttctctgttccccatggtagcgtttgtcttacatcaacagtttaatcaaattatttcaattgtttccaggtgatgaaagcatcaaagggtaaagctaatcctgttttgttgaacaaaatcctcggggagaaattgaaggccaatagttgagggggtttgtcgacaaacggagactcatgttgtagtccacgagtggacaatcgaactaaaccctgcaatttggggtctatttttcaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0544800, RefSeq:Os11g0544800