Os11g0546900

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0546900| Description = Similar to TaWIN1| Version = NM_001074599.2 GI:297611973 GeneID:4350697| Length = 3005 bp| Definition = Oryza sativ...")
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Gene Name

Os11g0546900

Description

Similar to TaWIN1

Version

NM_001074599.2 GI:297611973 GeneID:4350697

Length

3005 bp

Definition

Oryza sativa Japonica Group Os11g0546900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22047164..22050168

Sequence Coding Region

22047266..22047684,22048192..22048270,22048376..22048498,22049466..22049582,22049665..22049724

Expression

GEO Profiles:Os11g0546900

Genome Context

<gbrowseImage1> name=NC_008404:22047164..22050168 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22047164..22050168 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgccggcggagccgacgagggaggagagcgtgtacaaggcgaagctggcggagcaggcggagcggtacgaggagatggtggagtacatggagcgcgtggcgcgcgcggcggggggcgcctccggcggggaggagctcacggtggaggagcggaacctgctgtccgtggcgtacaagaacgtcatcggcgcccgccgcgcgtcgtggcggatcatctcgtcgatcgagcagaaggaggagggccgcgggaacgacgcccacgccgccaccatccgctcctacaggggcaagatcgaggccgagctcgcccgcatctgcgacggcatcctggccctgctcgactcccacctcgtcccctccgccggcgccgccgagtccaaggtcttctacctcaagatgaagggcgactaccacaggtaccttgcggagtttaagtctggcgacgagaggaagcaggctgcggagagcaccatgaatgcatacaaggctgctcaggacattgctctcgcagatttggctccgacccaccccataaggcttgggcttgcactcaacttttcagtgttctactatgagatcttgaactcccctgaccgtgcctgcaacctcgcgaagcaggcgtttgatgaggccatatcagaactggacagccttggtgaagaatcctacaaggacagcactttgatcatgcagctcctgcgtgacaacttgactctgtggacttcagatgccaatgatgatggtggtgacgaaatcaaggaagccgcagctccaaaagagcctggggatcagtga</cdnaseq>

Protein Sequence

<aaseq>MSPAEPTREESVYKAKLAEQAERYEEMVEYMERVARAAGGASGG EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAE LARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMN AYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDS LGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIKEAAAPKEPGDQ</aaseq>

Gene Sequence

<dnaseqindica>103..521#1029..1107#1213..1335#2303..2419#2502..2561#gcgttcgcatccgccgccgcagccgcagccgccgccgccgacgccgacgaggagaggaggagagggaaggcgagagggaggtaggtaggtaggcagttagccatgtcgccggcggagccgacgagggaggagagcgtgtacaaggcgaagctggcggagcaggcggagcggtacgaggagatggtggagtacatggagcgcgtggcgcgcgcggcggggggcgcctccggcggggaggagctcacggtggaggagcggaacctgctgtccgtggcgtacaagaacgtcatcggcgcccgccgcgcgtcgtggcggatcatctcgtcgatcgagcagaaggaggagggccgcgggaacgacgcccacgccgccaccatccgctcctacaggggcaagatcgaggccgagctcgcccgcatctgcgacggcatcctggccctgctcgactcccacctcgtcccctccgccggcgccgccgagtccaaggtcttctacctcaagatgaagggcgactaccacaggtaagattcgatggccttgatctagtatgtgcgcgcggcgaatcgaccaagaattcgagataggaggatttgttaggtcggtgaaggtaacatgtagggagttattgggggtgtgattaacttctaggatattcttttttcctttgtttattatatgattggtctctgggttaattaaggttgtacggtaggatttgatttgagttgtgcaggtccaaatttaagatctaatggtagttttttttatgggttgataggtgtatgagatcccttgttactgtacaggtctatgtttaagtcgtggtctttatatatgatgttaacatttcctcttggcggtgaaaaagtcagaattagatgtgatgtctgttaatggagcggttgaatgctagttttcttcatattcttggggatcttggcgctgcctaggagtttggtaccgattaaaggtgtgaaaatttttcatcttgatggatgtatgatttctcttggtgacgatttgtgaaggtaccttgcggagtttaagtctggcgacgagaggaagcaggctgcggagagcaccatgaatgcatacaaggctgctcaggttggatttgtgataatatgttttttttttgtacatgtggatgcaatggttaattggttagtcttgtggtttgaatttagttttttgttttgcgtgtgttggcaggacattgctctcgcagatttggctccgacccaccccataaggcttgggcttgcactcaacttttcagtgttctactatgagatcttgaactcccctgaccgtgcctgcaacctcgcgaagcaggtctgcttactctacttctacatccacttccattttcccctttaattttctattctgttagttgcatcatgcatcttcaatgtacatttctttgtatgatatattttcatgccaagtatttatccactattgattttgtaccattaaggacctgctttctactggaatactggttatactggagatatcatggtggatgaatggagctttttttctttgcttttgataagcatgaaagctgactttttctagtggaagttgtacttgcatttctttttatcgaaaaggcatccatgttgctcattctgaagatatatgctactttgtgagtgcatgaatgataaattaatttatactagaaacttaagctgcaatcaggttgtttctgtagctgaaatcccaaaacgtactattcaaatcccttggcacctgttggatgcattttttggctgattttcatgacgagatacagtttatgaatgatgtataacttatatgttacattttgactgtaaactttcaaggtgatgttgatcaaatggttgatatttttattttcttgattctcctgatgttccttcttgtaatttgtgtctatataattttcatttgccatatacccatgttataattttgacagaaatttcgcatgttccatttagactttgcatcatgttgaaccttcacaatcttaaaccaaatggttaaagtagtgtacctttgttttggagcttggaacggtaaagaagtgagaattatgccatttctgtgtgctgatagaattcttgtgactaactcgttctaagtgctgatacatttctagttgcttcaaataagtagaattagctatataagatgcgaaggttgtttctgttcttaagtaatagtgtgatcatattttatttgacattcacttaaaaatcagaacacggaacatatgatttgaatgaatccatgtttcttgtaggcgtttgatgaggccatatcagaactggacagccttggtgaagaatcctacaaggacagcactttgatcatgcagctcctgcgtgacaacttgactctgtggacttcagatgccaatgtgagtttcctgagccatttgatcgtttctgtcctatcttcgtggttctgatatcagtttttttgttttctcttttctgcaggatgatggtggtgacgaaatcaaggaagccgcagctccaaaagagcctggggatcagtgagatgaattcggacgccagtctgatgcaccatctgttgttgttggggcaatggacattgatgtcttcggctttcagtagctatcttctagtacacgaactgtcgtcgcaccatcgcggaggagacgatgatgttcttaaattacttaagtagttctgggtcacgcttttgttcagttgataaatgatggctggatcctggttttcttgttccacgatgccagccacaggaaaaaccctactattctgcactgttagaatgctgttatattaaccatgtttgacaagacattttcagtatgtttgtatgaccgtcttggaagtgtttggttgaacctgtctcagggtctttggtccaagacattattcacctggcttgcttaactcgttttagagaacaaaaaaatattgtctgtatggtgacatgcttgagttcaccgtaatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0546900, RefSeq:Os11g0546900