Os11g0549605

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Revision as of 09:13, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0549605| Description = Conserved hypothetical protein| Version = NM_001189658.1 GI:297728446 GeneID:9266319| Length = 3787 bp| Definition ...")
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Gene Name

Os11g0549605

Description

Conserved hypothetical protein

Version

NM_001189658.1 GI:297728446 GeneID:9266319

Length

3787 bp

Definition

Oryza sativa Japonica Group Os11g0549605, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22164786..22168572

Sequence Coding Region

22164786..22165310,22165414..22165542,22165628..22165699,22165780..22165983,22166475..22166750
,22166842..22166950,22167537..22167670,22168266..22168352,22168447..22168572

Expression

GEO Profiles:Os11g0549605

Genome Context

<gbrowseImage1> name=NC_008404:22164786..22168572 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22164786..22168572 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcgggtcaggccggtgacaccattggtagtatccatgtgcgcgtgctgtgggatcagacagttgagttctgcgcacctcaaggaactgtatgaatttctccagaagcttacacctatccttgcagattatgtacatcagaaggctcagaatggtgaacaagagagccagcaggattcgcttgctgtgactacctggttgaaagagacaggcaccttgtcttttgattatgggaagattgtgtcaagaaacactgatggttctagcaacccagatgaaattgttgatggtctattccacgaatctttgcttgaggatcccttggtatcatggggtggtgtgtggcaaagatgtcttgatcttggacctgatatccttaacaagataagtgaagcattgaataaactgaaggttaactgcagctcatgtgaagaactaaaacaaaaactcggagatgtttatttccttcctgacgcaatctttgagactgatattgacgtcaagccttattttgatgatgggattggctctgtacaagttgaaatgctattaattgatgctgaggtagattaccagaagaaaatgcttttggaagcctgtaaagtggattatcttgcagccattttacctattgcaaaggcttgccttcgggccaaaatgaataataaccttcgtccaccaaatggtcttgaactacaagcacctttgaatattattctccggtctttgtggcacataaggcgattccatgatactctccagaagataccatctaaatgcactgatgttaaagatggaaactctcaaattgggaagacattgtgtaaaatctttgattcttgggataatgagaaagcgggcaaaccatgtgacccgtgtgattcaacaagatttgcagattttacaaattctctggtttataaaaaggatggacaaaggaaaactgcaattgacattgtgaaatttatctttcggaggctgcactcatcacaaactcctttgcattttgagtttaagggtgaaactttggaccatcaaacaccagtcgagccatccttcctgggttgtatatgcctagtgcatgatctttttgggttgcacatttatgaaaataaattcaactgtgtgaatgaggtgtacaccgaatatcagtatactacattcctccacagcattgatttgggtgctgttggaaaaactaaggtggaatctttcagtgaactcttgaaagctcggaagtccaggattgaaagttgtgggcatatggtttcccagtactctcttgaatgtccaccacgtttgttcatgaccgtttttgaatggaaggaagacaaggtgggccacattaacatgcatgaagtattgatgagcctagctgtagagttggacattagtcatttctatggagatctgcattcaggaagcaagtatactctggtttctgcggtctgctgtaatgatcaggggcaatacttttgctttgctcgcggcaacaacatatggctcatatatgacaacaacagaagacccatgtatgctgaatcctgggaagcatcaatccagcagtacagtcaggccaacctctgtcctgaaatcatcttctttgagcgtgtcgaggatccagaattgggcacccaccgcgaccagactgcgccttga</cdnaseq>

Protein Sequence

<aaseq>MRRVRPVTPLVVSMCACCGIRQLSSAHLKELYEFLQKLTPILAD YVHQKAQNGEQESQQDSLAVTTWLKETGTLSFDYGKIVSRNTDGSSNPDEIVDGLFHE SLLEDPLVSWGGVWQRCLDLGPDILNKISEALNKLKVNCSSCEELKQKLGDVYFLPDA IFETDIDVKPYFDDGIGSVQVEMLLIDAEVDYQKKMLLEACKVDYLAAILPIAKACLR AKMNNNLRPPNGLELQAPLNIILRSLWHIRRFHDTLQKIPSKCTDVKDGNSQIGKTLC KIFDSWDNEKAGKPCDPCDSTRFADFTNSLVYKKDGQRKTAIDIVKFIFRRLHSSQTP LHFEFKGETLDHQTPVEPSFLGCICLVHDLFGLHIYENKFNCVNEVYTEYQYTTFLHS IDLGAVGKTKVESFSELLKARKSRIESCGHMVSQYSLECPPRLFMTVFEWKEDKVGHI NMHEVLMSLAVELDISHFYGDLHSGSKYTLVSAVCCNDQGQYFCFARGNNIWLIYDNN RRPMYAESWEASIQQYSQANLCPEIIFFERVEDPELGTHRDQTAP</aaseq>

Gene Sequence

<dnaseqindica>1..525#629..757#843..914#995..1198#1690..1965#2057..2165#2752..2885#3481..3567#3662..3787#atgaggcgggtcaggccggtgacaccattggtagtatccatgtgcgcgtgctgtgggatcagacagttgagttctgcgcacctcaaggaactgtatgaatttctccagaagcttacacctatccttgcagattatgtacatcagaaggctcagaatggtgaacaagagagccagcaggattcgcttgctgtgactacctggttgaaagagacaggcaccttgtcttttgattatgggaagattgtgtcaagaaacactgatggttctagcaacccagatgaaattgttgatggtctattccacgaatctttgcttgaggatcccttggtatcatggggtggtgtgtggcaaagatgtcttgatcttggacctgatatccttaacaagataagtgaagcattgaataaactgaaggttaactgcagctcatgtgaagaactaaaacaaaaactcggagatgtttatttccttcctgacgcaatctttgagactgatattgacgtcaagccttattttgatgatggggtatcaccttcctttttactgcattctgtttgctctccagttctgttaaaatgcattttaaacttgttgatcaatgctgaaatcccacttgctgtatttgcagattggctctgtacaagttgaaatgctattaattgatgctgaggtagattaccagaagaaaatgcttttggaagcctgtaaagtggattatcttgcagccattttacctattgcaaaggcttgccttcgggttagtacagtacttctatcaccaactgaactcgtattcactttttccataactttttcttatgtatgatatttaatgttgacaggccaaaatgaataataaccttcgtccaccaaatggtcttgaactacaagcacctttgaatattattctccgggtaacttgtgtttgcctcgttcagttttttatatttagctattggtttacttttctctaattttctctgactatctgcagtctttgtggcacataaggcgattccatgatactctccagaagataccatctaaatgcactgatgttaaagatggaaactctcaaattgggaagacattgtgtaaaatctttgattcttgggataatgagaaagcgggcaaaccatgtgacccgtgtgattcaacaagatttgcagattttacaaattctctggtttataaaaaggtctgttgcgttcactatttgtcccacctatctaattgcaaatctgtggcctccagcaaacagtaacaacgttcttttgtaaccaaattgtaaccgtctccatgttgtctacactctactcttagatcttagttatatcagataagttgttaatataaataaagtggatgagcttctattccttatgcttgttctgactccattgtccccttgagcaactcttttggccattttgtgcacctcaatctgcagttctttggagtagattagattaaaatcctgtttttctggatagaatatgacagattaaattctgctgatgatcctgtcactaatttgatccatgaatcacctttatgttgtctctagactacagaccaagttctgttccacatgcatttctgagtgcatattgactgtaacatacatttttttgtgcctcttgctgtcataggctcgtagctaatcagtaaatcggttgttgtttgcaggatggacaaaggaaaactgcaattgacattgtgaaatttatctttcggaggctgcactcatcacaaactcctttgcattttgagtttaagggtgaaactttggaccatcaaacaccagtcgagccatccttcctgggttgtatatgcctagtgcatgatctttttgggttgcacatttatgaaaataaattcaactgtgtgaatgaggtgtacaccgaatatcagtatactacattcctccacagcattgatttgggtgctgttggaaaaactaaggtgcgcactgcacagtgtatccatttctcctttccctttttatgtatttggttcaattagttagtaaactaacatcttttcacttattcaggtggaatctttcagtgaactcttgaaagctcggaagtccaggattgaaagttgtgggcatatggtttcccagtactctcttgaatgtccaccacgtttgttcatgaccggtagggttgtcttttcgactaatattcagaatgtaattatgtatatatctttcctctatttaggagaaaaatgtaggtcaattaaaggaatcatgtgatcagtatgccatatgattttttattgctgaaaaccaaatcaactattgaatataaacataccatatgtgctagtgtaatgataatacaaagtaattaatgccatgacatactcctgagttaatttgaaatcagccttccgtacccagagacaattttattcatttcctacaatttagggagcacctaggatgaaataagtattgtttttattaatatgaagaaaggaactatggaggactcttaagctaagtaatggtgattttccatgtaccgatcagtacagcatctgcagctttcatgaactagtagaacagaaaatatctaggaggaactagatatattgtttcattgaggagaacacctcgatgaacttgatatctgggtttggatctcacatgtactgagcttagctctcctcctaagtcctaatgataagctttacacttaaaacttatttgctttcttttcttttgctgctttctcacagtttttgaatggaaggaagacaaggtgggccacattaacatgcatgaagtattgatgagcctagctgtagagttggacattagtcatttctatggagatctgcattcaggaagcaagtatactctggtttctgcggtatgtgctgagacaatcctttgctatctatgttcctgaggttaacatgtgctttgcttttcttctacgttttagcacatttagtgtgctatcaaccgaggcttggggtggggtgggtggggggggggcaatggggaattaattaacttggaaggtgttcaactgtcatgataattagaggtgtgaatcctctatgaccgctctgctaacaaatgttaagactggctgttattcttccctgggatacacacatgatcatttctactttttgtttactacagatccttaagtaagccccagatgagattttaatatggactgcaatttatacttgtcaaattagttgattgaaatcatgaaatgttccattgatttcatcttgagaaagtggcgcttctggtacatcattgtaaattttgtgatattttctttttcgactgctcagttgcttggcaatagatgctacactggttcattactgtcaggttatcccaaatgataatacttgccttaccagcgcggagttttatttctgttattcttgcaatacatcctgtctaatgcctaccttggtaattttcacactgtttgtcaggtctgctgtaatgatcaggggcaatacttttgctttgctcgcggcaacaacatatggctcatatatgacaacaacagaagacccatggtaattcccgatcaactttgcgtatttatgttttgactcacatttggtcgagcattactcgatatcattatttgtgtttgttttgtccttccagtatgctgaatcctgggaagcatcaatccagcagtacagtcaggccaacctctgtcctgaaatcatcttctttgagcgtgtcgaggatccagaattgggcacccaccgcgaccagactgcgccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0549605, RefSeq:Os11g0549605