Os11g0572500

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0572500| Description = Similar to RING-H2 finger protein RHF1a (Fragment)| Version = NM_001189688.1 GI:297728506 GeneID:9270248| Length = 4...")
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Gene Name

Os11g0572500

Description

Similar to RING-H2 finger protein RHF1a (Fragment)

Version

NM_001189688.1 GI:297728506 GeneID:9270248

Length

4906 bp

Definition

Oryza sativa Japonica Group Os11g0572500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23322757..23327662

Sequence Coding Region

23324586..23324621,23324724..23324790,23325944..23325990,23326075..23326215

Expression

GEO Profiles:Os11g0572500

Genome Context

<gbrowseImage1> name=NC_008404:23322757..23327662 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23322757..23327662 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatctggaactgatgagaaagccaagatggagggtttgacatcagctgcagcctttgttgagggtgggattcaggatgcatgtgatgatgcatgtagtatctgccttgaggcgttctgtgagagtgacccttccacattgactggttgcaaacacgagttccacctccaatgcattcttgaatggtgtcagagaagttctcagtgtcctatgtgttggcagcctatcagtttgaaggatcctaccaggcaaagctgctcgaggcagtggagcgtgaaaggaatgtaa</cdnaseq>

Protein Sequence

<aaseq>MASGTDEKAKMEGLTSAAAFVEGGIQDACDDACSICLEAFCESD PSTLTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTRQSCSRQWSVKGM</aaseq>

Gene Sequence

<dnaseqindica>3042..3077#2873..2939#1673..1719#1448..1588#gatacctttcttctcctttccccatcgcctcctcacccagagagaagaggaggttggaggaggaggcgaagaggctagctagctagctagggtttcgtgctccccatcgcctcgcgcgcgcagccggatccgatcgggcgtcctcgtcggcgtcggcggcggtgcccctggtaaggccggatcccgatccttcccgttcggttgcggtggtgggtggtgtggggggcgtcggcgatctgggggcggttgggcgagctgggtccaattttggtggggggcgcggggttggattcctcgggttgtggggtggggtttggatgggggggaattggagacgatgtggtgtgggttgctgggcttgggtctaagtagggatgtgtttgttcgggtttggggtttgatgtggtgagaattgggggggtgttcgtgttgtgcgattaggggaattcgcggtatgctgcgtgcttttgttgaattgtgtgagaattttggattttaggtagttctattgtggggtggggggttaattgatttgggcgtgactttggatcgtgattccgggggacctgagccgtgccgtgtgaaatcgcgctgattggaagggtactcgttagaccaaattgttctgttctggggtttatgtttgatttggtcggcgtttgctatggtttggaggtattaattggagagaatttgagctggttgaggctctaccgagtaaaaatgggtcttgtgctggaactatgactatgattacatagcattacctgatagaatcattatggggcttctggaattctgatatggggaatataactttcttatttttcccatgtttggcttgatgagttttgacataactggtagtttttgttggctaatatgttcatttgctcggagtatatatcctatgaaaattggcataaatcttgcaaatctagttttcattagggatagaagttcttgaaaaaaaatgaactattgaaagggattagggaggatttgcactacagttttacaatatctcaagatcattttcaactaactcccccaagtgcaaaagatcatacttggtgactagcgagcagtgaattcgtatgcactatacagcaaatgaaaatgagtttaacaatgcattttacttggctacacaacttatctgtggtagttttttttttttggcaacttcggaaagctatactttgttaaaactgaatttgaacacctgtgccattgtttacaggctctttttttcaacaatataacatgtttgtttaagtgtatactatatttgttttcatgggatcattttggcctcagctgtgaataactgatgtgtttgctttccatcgtgaagccattttgagactttggtcaattgaagtgtttatattctaagcccttcttttctccatattctagatatcagtgttgtgattccgttgcaatggcatctggaactgatgagaaagccaagatggagggtttgacatcagctgcagcctttgttgagggtgggattcaggatgcatgtgatgatgcatgtagtatctgccttgaggcgttctgtgagagtgacccttccacagtaagatgccttatcttcaattgtatgttttttctcatatatgacattcttttaaccattttactgtgtttctttgttatgtagttgactggttgcaaacacgagttccacctccaatgcattcttgaatggtataatattgaccccagtttatgcatatcattggtgaaaaattcttatatttctgctgtgcgctgtactttgtctgtctgaatttatttgagttgttcctggatcaactgcaagcatgttgacattatatatcaatatcaaactatttgggtcagttttgatttcatgtggtcagctttgcatgcttgaggttttgggtagactatcaactgttctttttctattgaggagttgttataaaattcagtgaaggaatgaaccagacttctagtacataatatcctgctctctctagggtgctaatcccatatatttgtgcattgatgaccatgatacacctactgtcaactttttacacttcttccagtttgcattaaacgtcagtgtgaccagacaatatacctaaatactttcaactatcaaagtatctacctattagtatagtttccatgtgctaatttcagtatttccatacattcctatggatgcatgcatatcatgattgtttaattttattgagattaaatttctgaaagccctactacctttggtaaaaccatcacaaaatcacattttcaagtgattgtttcacaacatttgatctttcgaaacatttgacaaaactgaactttagttatttccatcatactcaatgtacttggccccgcttgatagttactagcatatatgttccattgtgaatttggctaggtttgtgagactaacagctggtgtcgatagaatacaatgataatgcttaaaatgtaattttgtgaatcctttttttaataaataaatgaggcctgttatgaatttttttctcaagattgcagtttgcgatagctttagcaaatgtagtgctgttttatgaaaatgtactcctttattaattgaaggggtgctgtattatagaattattcatagttttgttcatattacagtataggtaaataagatttgctatatatttatatagatccttcttatatatagtggaattgtgaaacttcagtggtagttaactagctgtaacttgtaaggggatttctccagagattatgaatgagacttcacatggcaaattccattatcagttcttttttctgtgtaaaaagatttttcatattgatgatcggtggtccttttgcataggtgtcagagaagttctcagtgtcctatgtgttggcagcctatcagtttgaaggatcctaccaggcaagtcgtcaaaatactttatgttttctttgcctatacagatatcaggcagaattttaacatgtaaaagggtactaacctctgtcctactaatatgtcagtcaagagctgctcgaggcagtggagcgtgaaaggaatgtaaggaccaatcaaactcgaaatacaactatatttcatcatcctgctcttggagattttgaggttcagcatgtatgtgttatgaaactaacttgagttttgatatattcctcctgatttgactagtgaagcattttctagtgttaacctaattagcaagatgaacttttgcagttacctgttgttggtaatgatgctgaacttgaagagcgtatattacagcacctagcagcagccgctgcaatgggaaggtcacaccaccttggtagaagagaaggacacaggggtcgttccggctctcatggtcgtccacagttcttagttttttcttcgcatccaaacatgccttctgctggttcagtttcttcatcgtccgttcaaggggaagtggataatgaatcaagtcctgtccacacaactggtgaattatcactgcatgctaacacccatgaagaagcaggcaatcaaagtcctgggatgcttacctacgatgctgatcaagatgctgttgtttcatctggaaatagtacccctgtatctagccctaggtttttcaacaggtaaattgagtcacctatatgcatgcactatgtccttatgttttttttttatgataaccaatatgatgatcctggtgtatcaggaggcattccactgggcaatcaactccagtaaacaacgacagagctgggccttcagatcttcagtctttctcagactctctgaagtctcgcttaaatgctgtctctatgaagtatggagttttattttcttaagttgcttcgaaagttgtctatcaacttttatgttaaatctgtttctccttttgtccgattcaggtacaaggaatctattacaaaaagtactcgaggatggaaggagagacttttttcgcgtcattcatctgtggcagatcttggttctgaagtaagaagagaagttaatgctggaattgcatccgtatcaaggatgatggagcgtctggaaactagaggtagtaatggtagaacaagtgatggcccagcaatatccacttctgaagttattcccagtacagaatcaagcaatgagagagttacagaaaacaatccaactactgcagcgacaagtagtggcaacacttctgcgtcttctgccccttgtgttacaacaaccggttcaaattagcatgttataggttccgaaagaaggcctgcacattcccattcttctccatcaaaggtactacattttcaactgaaagataattattgcgatatatgtagttttagtatgcattgcttctagacggaaggataatttatgcactcaaccgtggctgtcttaccttgtaatttagtcatttagttctagttaggttaagggttagttattggttgactctcacatttgagaaaatgccatttatgtagaaacgggaatttcattttttttttacatccaagcaagagacgctgccaacaattatgtttagttaaacaaatatggatatgggttacgtccatttattagctccaaatgattatcttagttcaactgtctgtttgctcacaactgattcatgttacacggattacaggattgccattgccaggcatgggcaggtgaccaaaagcaacgtcatgttgtcatcctcagcattgcataaatcacctccagaaaatcggaatgacaaatttgatgtattggtttgataaaagggctcagcccgaggtattaccttaggatgccgatttgttctgcttcatctatgtaaaaagggaaaaaaatcagggacaagtttttaccggtataaataatggatttggtgacataatagcaatcataatcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0572500, RefSeq:Os11g0572500