Os11g0574200

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0574200| Description = Conserved hypothetical protein| Version = NM_001074665.2 GI:297612062 GeneID:4350764| Length = 3756 bp| Definition ...")
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Gene Name

Os11g0574200

Description

Conserved hypothetical protein

Version

NM_001074665.2 GI:297612062 GeneID:4350764

Length

3756 bp

Definition

Oryza sativa Japonica Group Os11g0574200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23409170..23412925

Sequence Coding Region

23409170..23410122,23410187..23410569,23410809..23410840,23410884..23411140,23411268..23411293
,23411463..23411650,23411871..23412164,23412283..23412321,23412396..23412513
,23412888..23412925

Expression

GEO Profiles:Os11g0574200

Genome Context

<gbrowseImage1> name=NC_008404:23409170..23412925 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23409170..23412925 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctaagagaacatgcatgttttactttggaaaaagaaatgatgaatgcccagcatgccgcacccttgcaagtagtcattcgttgaaggttgatcctaattttgacgctttaattttgacgttgtatccagatcttcacaaggacgaggaagaggaacttgctttcactgaagagaaaacttgtcgcaaaaagatccaagcatccaccgatgaggcacctcatagacgaaaagaagcacttgggaagaagcgctccgctgcaaaagcaataggttcttcaaggtctcaagggaatatgctggcaaggaagagaggacacattggttttcctgatattgtcccatctaaagttggtggtaaggatagggaagaaaatgacaacagtggctgcgatgagtggtctttatttgatgagtattcacaagatataaagaagaaaagagctcggaggtgtcttgtgccacgatcatcccctgctggacataaaatttccacaactttgaagaaggacgctcatgcaagaagttttgagtgtggacaaatttgggctttatatagtgaagttgataaattccccaagttatacggttggataagaaaagtcaagctacaaccattcacagtgcatttgacctggcttgagccttgtcctcaacaggagcaggagaagcggtgcaaagctacatgcgagttcaccatcgaggaaagaggtggtgagctttgtggcttcttagagcttgatcctggttctgttcctgacattttcctcaatagggaagaaaataacaatgatggttgcaaagggttgtcatcagttggtgatcattcagaaggtccaaagacaaaaaaagctcgcaagtttcatgtgtcacaatcatcccccgctggacataaagtcaccagcaaagtggacagccatgaggaaagaatggcaaatcgtgtagctattcggctaaagaacatcatgaagatctttctttgcaaaaaaagagctgacagacaatataatccacctcctatgacaagaaaagtagacattcaaggtaaaggaaaaacttcagacacagatgataaggacaatgccaatgctgaagctactaatactgttcgtcagaatgagcattcctgttctttagaacttccgtccccatatccagatttctatgattttgagaagctcagggatattaatatgttctcacttggtcagatatgggccctttacgacgaccttgatggcatgccaagattttatgctcgaattgaacattttgatgcatccagcttcaaagctcatctcacttggttggagtacaatgcagcaagtgaagaagagaagaaatgggctgatgaagaacaacctgttgcttgtggcaaaaagaggattgcctatgaagtatatcttaataagggtgagttatgggctctttataaggattggagcatgcagtggaattcagatgcagacagccatcggtcttatgattatgaagttgttgaaatattgtcaggtttctcagttaatgatggtatcactgttatcccattagtcaggattaaaggctttgtgagtttatttgcggcagctaaagacaaatctgcagttgtgatagcatcgagtgagttgcttcgattttctcataatatcccctgttacaggacaactggaaatgaaaaagtaggtgccccggcagggtttatggaacttgacacttcttgtctccccattgacatggatatgatatttccttctgtcaccctggactcttacatctcccttggcaagaaaaagggcagtacactcattgatttgacgactgacagtagaagtagtagaaaggatcctggaaatgaacaaacggagaatctttctgaagcacaaaaggagagtctttcttctgaaaaaaactcatccttgcccaaaaatggccacgttgccaatggttttggcaataattctgggccaggctgcccttccccaaccccaactattttttcatatcctgatccagaattccataacttcgaagatgaccgcacatgtgagaagtttgaacctgggcagatttgggctttatacagtgatgttgataaattccccaagttctatggttggataagcaaagtcgagcgacaaccgttcatagtgcatttgatctggcttgaggcttctcctgaatatgagcaggagaaacggtggttggagcaggacttaccagtctcttgtggtaaatttaaaatccgggactggaaaaccaagtatgagagaaattattctttctcatttagtacatacaggatagaatggctcaaaccggcagattga</cdnaseq>

Protein Sequence

<aaseq>MSKRTCMFYFGKRNDECPACRTLASSHSLKVDPNFDALILTLYP DLHKDEEEELAFTEEKTCRKKIQASTDEAPHRRKEALGKKRSAAKAIGSSRSQGNMLA RKRGHIGFPDIVPSKVGGKDREENDNSGCDEWSLFDEYSQDIKKKRARRCLVPRSSPA GHKISTTLKKDAHARSFECGQIWALYSEVDKFPKLYGWIRKVKLQPFTVHLTWLEPCP QQEQEKRCKATCEFTIEERGGELCGFLELDPGSVPDIFLNREENNNDGCKGLSSVGDH SEGPKTKKARKFHVSQSSPAGHKVTSKVDSHEERMANRVAIRLKNIMKIFLCKKRADR QYNPPPMTRKVDIQGKGKTSDTDDKDNANAEATNTVRQNEHSCSLELPSPYPDFYDFE KLRDINMFSLGQIWALYDDLDGMPRFYARIEHFDASSFKAHLTWLEYNAASEEEKKWA DEEQPVACGKKRIAYEVYLNKGELWALYKDWSMQWNSDADSHRSYDYEVVEILSGFSV NDGITVIPLVRIKGFVSLFAAAKDKSAVVIASSELLRFSHNIPCYRTTGNEKVGAPAG FMELDTSCLPIDMDMIFPSVTLDSYISLGKKKGSTLIDLTTDSRSSRKDPGNEQTENL SEAQKESLSSEKNSSLPKNGHVANGFGNNSGPGCPSPTPTIFSYPDPEFHNFEDDRTC EKFEPGQIWALYSDVDKFPKFYGWISKVERQPFIVHLIWLEASPEYEQEKRWLEQDLP VSCGKFKIRDWKTKYERNYSFSFSTYRIEWLKPAD</aaseq>

Gene Sequence

<dnaseqindica>2804..3756#2357..2739#2086..2117#1786..2042#1633..1658#1276..1463#762..1055#605..643#413..530#1..38#atgtctaagagaacatgcatgttttactttggaaaaaggtacatcactaagctcatgttctacatattttagagaagcacaactagacagagtttattacactaggttgagtaagcttctcatctgtggaattttaaatagcatctctgcacaaactgtgcatagctgatcatctgaatgccttatggccctattgcaggcattatccagaaggcaaggataattacggagtgtttgcaccggttctgtagggactgcatagaaaaatccatgtggcttgggtatggtccctaacattattcacctaaaattctgtcaatgccatttcgaaagaatggacctgactggggttttgaaatagaatgtggtacttactttttatgttaaactgagtgatacattgtttttatagaaatgatgaatgcccagcatgccgcacccttgcaagtagtcattcgttgaaggttgatcctaattttgacgctttaattttgacgttgtatccagatcttcacaaggacgaggaagaggtgatgcataagttttctggttgttgcacttagctatttcatttagtttcactacactttgcttgaccacacaggaacttgctttcactgaagagaaaacttgtcgcaaaaaggtgggtttatctgactgtgtcatagtatatttaatgtagggaaattattttccctgcccatttggaatttgtcttctgtttattgttactgaaattagcttttgtttatcaatggaagatccaagcatccaccgatgaggcacctcatagacgaaaagaagcacttgggaagaagcgctccgctgcaaaagcaataggttcttcaaggtctcaagggaatatgctggcaaggaagagaggacacattggttttcctgatattgtcccatctaaagttggtggtaaggatagggaagaaaatgacaacagtggctgcgatgagtggtctttatttgatgagtattcacaagatataaagaagaaaagagctcggaggtgtcttgtgccacgatcatcccctgctggacataaagtacccagcaaagtggaccaccatgaggaaggaaatgcaacacataaagcagaatcactctaagacacatatttgctgcccgctgtctacagaagatcagatggatctttcttctaaacaagacacattcacgacaaaaactgttataatgccaatggttttaacaatttctctgtgccaaggtattcctcctccagttattttgccattcctaattcagatttccacaactttgaagaaggacgctcatgcaagaagttttgagtgtggacaaatttgggctttatatagtgaagttgataaattccccaagttatacggttggataagaaaagtcaagctacaaccattcacagtgcatttgacctggcttgagccttgtcctcaacaggagcaggagaagcggtggtaaatttaaaattcggaactggaaaaccaagtatcacggaaatgatgttttctctcatttagtaaatacgggacatattgactcaaattggcagattgaaatccttccgtaagtaggtgaaatttggtccatctacatgaactggacatttgactggactccttccagcaaagctacatgcgagttcaccatcggtgagatcgttgagcgcacggaagcaactataaaagtttccttctgaccagcgtaggggagttctgaagatacctataaaagatcgtttgaggttttctcatcaaatactctccttccgtttgacagaggaaagaggtggtgagctttgtggcttcttagagcttgatcctggttctgttcctgacattttcctcaatagggaagaaaataacaatgatggttgcaaagggttgtcatcagttggtgatcattcagaaggtccaaagacaaaaaaagctcgcaagtttcatgtgtcacaatcatcccccgctggacataaagtcaccagcaaagtggacagccatgaggaaagaatggcaaatcgtgtagctattcggctaaaggtgaatcagtctgaagcacatgtttgtcgcctgctgtctgcagaacatcatgaagatctttctttgcaaaaaaaggtaacctttcagaagaatagtgatagttccaacaggtttggtgattcctctcagccaatctgtctctcccacagtatatatgcggcctcctctggtgtctccagaccagctaacagaaagaaagatgttgatggcaacagtagactgaactccaatggtaaaaggaagtaaaagaagaatgatcttccattttctgttcacttgaatcgtaagaaaacgttcggtgatactgcccatagagctgacagacaatataatccacctcctatgacaagaaaagtagacattcaaggtaaaggaaaaacttcagacacagatgataaggacaatgccaatgctgaagctactaatactgttcgtcagaatgagcattcctgttctttagaacttccgtccccatatccagatttctatgattttgagaagctcagggatattaatatgttctcacttggtcagatatgggccctttacgacgaccttgatggcatgccaagattttatgctcgaattgaacattttgatgcatccagcttcaaagctcatctcacttggttggagtacaatgcagcaagtgaagaagagaagaaatgggctgatgaagaacaacctgttgcttgtggtaagttttgcttagggtcaacatgacagactcatgttctctcacattgtttcatggacaaaaggcaaaaagaggattgcctatgaagtatatcttaataagggtgagttatgggctctttataaggattggagcatgcagtggaattcagatgcagacagccatcggtcttatgattatgaagttgttgaaatattgtcaggtttctcagttaatgatggtatcactgttatcccattagtcaggattaaaggctttgtgagtttatttgcggcagctaaagacaaatctgcagttgtgatagcatcgagtgagttgcttcgattttctcataatatcccctgttacaggacaactggaaatgaaaaagtaggtgccccggcagggtttatggaacttgacacttcttgtctccccattgacatggatatgatatttccttctgtcaccctggactcttacatctcccttggcaagaaaaagggcagtacactcattgatttgacgactgacagtagaagtagtagaaaggatcctggaaatgaacaaacggagaatctttctgaagcacaaaaggagagtctttcttctgaaaaaaactcatccttgcccaaaaatggccacgttgccaatggttttggcaataattctgggccaggctgcccttccccaaccccaactattttttcatatcctgatccagaattccataacttcgaagatgaccgcacatgtgagaagtttgaacctgggcagatttgggctttatacagtgatgttgataaattccccaagttctatggttggataagcaaagtcgagcgacaaccgttcatagtgcatttgatctggcttgaggcttctcctgaatatgagcaggagaaacggtggttggagcaggacttaccagtctcttgtggtaaatttaaaatccgggactggaaaaccaagtatgagagaaattattctttctcatttagtacatacaggatagaatggctcaaaccggcagattga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0574200, RefSeq:Os11g0574200