Os11g0579100

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0579100| Description = Conserved hypothetical protein| Version = NM_001074676.1 GI:115486000 GeneID:4350776| Length = 2780 bp| Definition ...")
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Gene Name

Os11g0579100

Description

Conserved hypothetical protein

Version

NM_001074676.1 GI:115486000 GeneID:4350776

Length

2780 bp

Definition

Oryza sativa Japonica Group Os11g0579100, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23703007..23705786

Sequence Coding Region

23703228..23705786

Expression

GEO Profiles:Os11g0579100

Genome Context

<gbrowseImage1> name=NC_008404:23703007..23705786 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23703007..23705786 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agcgatgacgagcagcagccacggcctcagttgaacagcgacggtggcaaggagcagcccctagcgccgcagtcggatggcagaaacaaggagcagctgccgcctccccaatccggaggcggcaatggcatcaagcagcagcagccactgcctccgcagtcagatggaggcgacaaggagcagccgcctccttcgctgtcggatggtggcgacaaggaccagccgcttcctcccgactgcggcgtcaagcggcagctgccgccccagtcggacggtgatgacaagcagcagccgccgccccagtcagacggcagcgatcagccgccgccgccgcagccggatggaggcgacacggagcagcagccgcctcagtcagacggcggcgacaagaagcagaagcatattagagtcgtcacaatcagtgtgcaagacggcacggatgaagctgttgctgcagaggccgtgatcgagcgtttcaagagccgctgggcacggcggggactctggtcgcagcagctctgcctccacgtttctgtccatcggcctccgattctctcggagattacaaaggtcatggttgaaaagctgaaagagaaggaggatgatgagaagaatgaggcggaagacagggagtggcttggccataaattgaaagatgaagatgtgctgcttgttctttccggttttaattacccagcgttatggaaccaggttctggatttgctgacctcgatgagctgctctgactgtgcagtagtactctgcacaaacgatagtaagatggcaaaatattgctgcagcaatgactctgccaacgatgggcctcagataatctactctctcgttgatatttacctcaacagagcgctcgccctgctttcccacagctacggatacgaggaaggacacttgaaagaaattctgcgcaacatcctcgccaagtgttgccttgatgtcttctgcatgaagatgctcctccatgccctctactacaatcctgacatgacgaaacaccaactgcagttcctgaatataagccttggtaaagaatttacagatcatgggagacaggaccgaataatggccttctgctaccaagcactgccaaatagttacaagaactgcttatggtattcaaccattttcgcccgtggaagcggcgtccgaagggcaagtttaataagacgatggattgcccaaggcttgatagcccaagtgaaccagtcaagtgcagaggacgaagccgggcactgtttcgaagccatgcacagccagaagcttattgtttcttctggtcttagtggtacacgcaaggtaaagagctgcaccgtgcatccagtagtttctggcttgatcagcagggagtcttcgacagttgaggacctattgctcaacaaccagctgccacttgacttggatctcctctactcaatccggcacggcatgcaactccatccggcaaactctaatatcaaaaagttcttgaactcactttccagcagttcaaggttgctgctgacagtacttgatttggaaggtcgcaagggcctcaaggcaggcgacctccataccgtatgcaagattcataaactcaagtatctaagtctccggaacacagatattgcccaactgcccaaggaaataggtcagctcaagctcttagagacacttgacatccgaggaacaagggtacaagtgttccacacggcgctaccaatgctaaagcacctgcttgctggttgcattattgactacccaaaggaagacatcatcaagtccaaggaatcattctccacggtttccatgcctcgtgctgttgcaactatggaaaagatggagatattgtcccgtgtcaaggtttcgaacagtgctaaagaactgaacaacattggtgacaagctcgagcacctaaagaagttgggtgtggttctatctggcaagaaagctagcttgatagatttgttccttcaggttgacaaactccacagatgtcttcggtccttatcaatccgaatggatccaccaggtaactgggattctattgatgttattttattgagacctccaaagcttctggagagcctacacatctgcagcatcagaagcgggttgcctcccaggatcaaggagctccatcagcttgccaagataactctacgtgacacctttttgaatcagggtgccctcgatatacttagcatgctcaaaggcctacgctatctcaggctttgctaccattcattcgcagaaggcgctctgagcttcgtgaagtttgtggaacttgtggatcttgtcattgaagatgatattgttaacagtgtcgccttgggtaataatacttatggtggagaccctgataaacttgaaaagatagtttggtccttcactcacatggaggagctttcaggggtcagtacgctgcagagtctgacacacatcgaactcaatgggagaacatggcacctacagaatctggaaaaactgaaaagagaagtagatgaatgtgggattactttcacgctcaatccacctgagaatggccaaggatcaaggctgtag</cdnaseq>

Protein Sequence

<aaseq>SDDEQQPRPQLNSDGGKEQPLAPQSDGRNKEQLPPPQSGGGNGI KQQQPLPPQSDGGDKEQPPPSLSDGGDKDQPLPPDCGVKRQLPPQSDGDDKQQPPPQS DGSDQPPPPQPDGGDTEQQPPQSDGGDKKQKHIRVVTISVQDGTDEAVAAEAVIERFK SRWARRGLWSQQLCLHVSVHRPPILSEITKVMVEKLKEKEDDEKNEAEDREWLGHKLK DEDVLLVLSGFNYPALWNQVLDLLTSMSCSDCAVVLCTNDSKMAKYCCSNDSANDGPQ IIYSLVDIYLNRALALLSHSYGYEEGHLKEILRNILAKCCLDVFCMKMLLHALYYNPD MTKHQLQFLNISLGKEFTDHGRQDRIMAFCYQALPNSYKNCLWYSTIFARGSGVRRAS LIRRWIAQGLIAQVNQSSAEDEAGHCFEAMHSQKLIVSSGLSGTRKVKSCTVHPVVSG LISRESSTVEDLLLNNQLPLDLDLLYSIRHGMQLHPANSNIKKFLNSLSSSSRLLLTV LDLEGRKGLKAGDLHTVCKIHKLKYLSLRNTDIAQLPKEIGQLKLLETLDIRGTRVQV FHTALPMLKHLLAGCIIDYPKEDIIKSKESFSTVSMPRAVATMEKMEILSRVKVSNSA KELNNIGDKLEHLKKLGVVLSGKKASLIDLFLQVDKLHRCLRSLSIRMDPPGNWDSID VILLRPPKLLESLHICSIRSGLPPRIKELHQLAKITLRDTFLNQGALDILSMLKGLRY LRLCYHSFAEGALSFVKFVELVDLVIEDDIVNSVALGNNTYGGDPDKLEKIVWSFTHM EELSGVSTLQSLTHIELNGRTWHLQNLEKLKREVDECGITFTLNPPENGQGSRL</aaseq>

Gene Sequence

<dnaseqindica>1..2559#agcgatgacgagcagcagccacggcctcagttgaacagcgacggtggcaaggagcagcccctagcgccgcagtcggatggcagaaacaaggagcagctgccgcctccccaatccggaggcggcaatggcatcaagcagcagcagccactgcctccgcagtcagatggaggcgacaaggagcagccgcctccttcgctgtcggatggtggcgacaaggaccagccgcttcctcccgactgcggcgtcaagcggcagctgccgccccagtcggacggtgatgacaagcagcagccgccgccccagtcagacggcagcgatcagccgccgccgccgcagccggatggaggcgacacggagcagcagccgcctcagtcagacggcggcgacaagaagcagaagcatattagagtcgtcacaatcagtgtgcaagacggcacggatgaagctgttgctgcagaggccgtgatcgagcgtttcaagagccgctgggcacggcggggactctggtcgcagcagctctgcctccacgtttctgtccatcggcctccgattctctcggagattacaaaggtcatggttgaaaagctgaaagagaaggaggatgatgagaagaatgaggcggaagacagggagtggcttggccataaattgaaagatgaagatgtgctgcttgttctttccggttttaattacccagcgttatggaaccaggttctggatttgctgacctcgatgagctgctctgactgtgcagtagtactctgcacaaacgatagtaagatggcaaaatattgctgcagcaatgactctgccaacgatgggcctcagataatctactctctcgttgatatttacctcaacagagcgctcgccctgctttcccacagctacggatacgaggaaggacacttgaaagaaattctgcgcaacatcctcgccaagtgttgccttgatgtcttctgcatgaagatgctcctccatgccctctactacaatcctgacatgacgaaacaccaactgcagttcctgaatataagccttggtaaagaatttacagatcatgggagacaggaccgaataatggccttctgctaccaagcactgccaaatagttacaagaactgcttatggtattcaaccattttcgcccgtggaagcggcgtccgaagggcaagtttaataagacgatggattgcccaaggcttgatagcccaagtgaaccagtcaagtgcagaggacgaagccgggcactgtttcgaagccatgcacagccagaagcttattgtttcttctggtcttagtggtacacgcaaggtaaagagctgcaccgtgcatccagtagtttctggcttgatcagcagggagtcttcgacagttgaggacctattgctcaacaaccagctgccacttgacttggatctcctctactcaatccggcacggcatgcaactccatccggcaaactctaatatcaaaaagttcttgaactcactttccagcagttcaaggttgctgctgacagtacttgatttggaaggtcgcaagggcctcaaggcaggcgacctccataccgtatgcaagattcataaactcaagtatctaagtctccggaacacagatattgcccaactgcccaaggaaataggtcagctcaagctcttagagacacttgacatccgaggaacaagggtacaagtgttccacacggcgctaccaatgctaaagcacctgcttgctggttgcattattgactacccaaaggaagacatcatcaagtccaaggaatcattctccacggtttccatgcctcgtgctgttgcaactatggaaaagatggagatattgtcccgtgtcaaggtttcgaacagtgctaaagaactgaacaacattggtgacaagctcgagcacctaaagaagttgggtgtggttctatctggcaagaaagctagcttgatagatttgttccttcaggttgacaaactccacagatgtcttcggtccttatcaatccgaatggatccaccaggtaactgggattctattgatgttattttattgagacctccaaagcttctggagagcctacacatctgcagcatcagaagcgggttgcctcccaggatcaaggagctccatcagcttgccaagataactctacgtgacacctttttgaatcagggtgccctcgatatacttagcatgctcaaaggcctacgctatctcaggctttgctaccattcattcgcagaaggcgctctgagcttcgtgaagtttgtggaacttgtggatcttgtcattgaagatgatattgttaacagtgtcgccttgggtaataatacttatggtggagaccctgataaacttgaaaagatagtttggtccttcactcacatggaggagctttcaggggtcagtacgctgcagagtctgacacacatcgaactcaatgggagaacatggcacctacagaatctggaaaaactgaaaagagaagtagatgaatgtgggattactttcacgctcaatccacctgagaatggccaaggatcaaggctgtaggtgctatcgtaccccataatcatcaatgctgagaaagatggaactccgtaatcctggggagtatttctaaattctactacggctgcttctactatggaataaagatgtttttcctcttccatctgtcatgttggactggtattgcacctttatgtttcgagtgttaatggcaatctcatattgtaatattgtttccattgctttcagtttggtttagttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0579100, RefSeq:Os11g0579100

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