Os11g0577800

From RiceWiki
Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0577800| Description = Glycoside hydrolase, family 17 protein| Version = NM_001074672.2 GI:297612072 GeneID:4350771| Length = 1479 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0577800

Description

Glycoside hydrolase, family 17 protein

Version

NM_001074672.2 GI:297612072 GeneID:4350771

Length

1479 bp

Definition

Oryza sativa Japonica Group Os11g0577800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23632641..23634119

Sequence Coding Region

23632641..23634119

Expression

GEO Profiles:Os11g0577800

Genome Context

<gbrowseImage1> name=NC_008404:23632641..23634119 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23632641..23634119 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgacggtgtggcgttgcgcggtggtggtcggagtggtgatcatggcggcggcggcggtggtggatgggctcggggtgaactggggcacaatggcgacgcaccggctgccgcccaaggtgatggcgcggctgctcaaggacaacgggttcaagaaggtgaagatcttcgacgccgacgcgacgaccatgtcggggctcgccggcaccggcatcgaggcgatgatcgccgtccccaacgacatgctcgccgccgtcggcgactacggccgcgccagggagtgggtgaaggagaacgtcacgaggtacagcttcgacggcggcgtcgacatcaggtacgtcgccgtcggcaacgagccgttcctcaaggcgtacaacggccagttcgaccgcgccaccgtgccggcgctgaggaacatccagcgcgcgctcgacgaggccgggtacgggaagcggatcaaggcgacggtgccggtgaacgccgacgtgtacgactcgccggcgagcaacccggtgccgtcggcggggaggttccgcgacgacgtcgccggcaccatggccgacatggtcaggttcctcaaccgcagcggcgcgccgctcacagtcaacatctaccccttcctcagcctctacggcaacgacgacttcccgctcgactacgccttcttcgacggcgggccgccgccgcggccggtggtggacaacggcatcaactacaccaacgtgttcgacgccaacttcgacacgctggtgtcggcgctgaagaggatcgggttcgggagcctcccgatcgtgatcggcgaggtcgggtggccgacggacggcgacaagcacgccaccgtgccgtacgcgcagcggttctactccggcctgctcaagcggctggcggcgcggcgcggcacgccgctccggccgcgcgcgcgcatcgaggtgtacctgttcgggctgatggacgaggacaccaagagcgtggcgccgggcaacttcgagcgccactggggcatcttcacgttcgacggccggcccaagttcccgctcgacctccgcggcgccgggcggccggcgatgccggtgccggcgaagggcgtcaagtacctgccacggcggtggtgcgtgctgaacccgaacgtgacggacgacgacgccggccggctcgccgacaacgtcgggtacgcgtgctcgcactccgactgcacggcgctcggctacgggtgcagctgcggcgcgctcgacgcgcgtgggaacgcgtcgtacgcgttcaacgtgtactaccaggcgcaggggcaggccgacgcggcgtgcgacttccaggggctcgccgtcgtcaccgaagacgacagggacgtggcgcagggcgcctgcaacttcagcgtgcaggtcgccgccgcggcattggtgggcgccgccgttgccgccgccgcggcggtggcgtgcgcggcggccgtggtggccgcgctccttgcgttggtctga</cdnaseq>

Protein Sequence

<aaseq>MAAATVWRCAVVVGVVIMAAAAVVDGLGVNWGTMATHRLPPKVM ARLLKDNGFKKVKIFDADATTMSGLAGTGIEAMIAVPNDMLAAVGDYGRAREWVKENV TRYSFDGGVDIRYVAVGNEPFLKAYNGQFDRATVPALRNIQRALDEAGYGKRIKATVP VNADVYDSPASNPVPSAGRFRDDVAGTMADMVRFLNRSGAPLTVNIYPFLSLYGNDDF PLDYAFFDGGPPPRPVVDNGINYTNVFDANFDTLVSALKRIGFGSLPIVIGEVGWPTD GDKHATVPYAQRFYSGLLKRLAARRGTPLRPRARIEVYLFGLMDEDTKSVAPGNFERH WGIFTFDGRPKFPLDLRGAGRPAMPVPAKGVKYLPRRWCVLNPNVTDDDAGRLADNVG YACSHSDCTALGYGCSCGALDARGNASYAFNVYYQAQGQADAACDFQGLAVVTEDDRD VAQGACNFSVQVAAAALVGAAVAAAAAVACAAAVVAALLALV</aaseq>

Gene Sequence

<dnaseqindica>1..1479#atggcggcggcgacggtgtggcgttgcgcggtggtggtcggagtggtgatcatggcggcggcggcggtggtggatgggctcggggtgaactggggcacaatggcgacgcaccggctgccgcccaaggtgatggcgcggctgctcaaggacaacgggttcaagaaggtgaagatcttcgacgccgacgcgacgaccatgtcggggctcgccggcaccggcatcgaggcgatgatcgccgtccccaacgacatgctcgccgccgtcggcgactacggccgcgccagggagtgggtgaaggagaacgtcacgaggtacagcttcgacggcggcgtcgacatcaggtacgtcgccgtcggcaacgagccgttcctcaaggcgtacaacggccagttcgaccgcgccaccgtgccggcgctgaggaacatccagcgcgcgctcgacgaggccgggtacgggaagcggatcaaggcgacggtgccggtgaacgccgacgtgtacgactcgccggcgagcaacccggtgccgtcggcggggaggttccgcgacgacgtcgccggcaccatggccgacatggtcaggttcctcaaccgcagcggcgcgccgctcacagtcaacatctaccccttcctcagcctctacggcaacgacgacttcccgctcgactacgccttcttcgacggcgggccgccgccgcggccggtggtggacaacggcatcaactacaccaacgtgttcgacgccaacttcgacacgctggtgtcggcgctgaagaggatcgggttcgggagcctcccgatcgtgatcggcgaggtcgggtggccgacggacggcgacaagcacgccaccgtgccgtacgcgcagcggttctactccggcctgctcaagcggctggcggcgcggcgcggcacgccgctccggccgcgcgcgcgcatcgaggtgtacctgttcgggctgatggacgaggacaccaagagcgtggcgccgggcaacttcgagcgccactggggcatcttcacgttcgacggccggcccaagttcccgctcgacctccgcggcgccgggcggccggcgatgccggtgccggcgaagggcgtcaagtacctgccacggcggtggtgcgtgctgaacccgaacgtgacggacgacgacgccggccggctcgccgacaacgtcgggtacgcgtgctcgcactccgactgcacggcgctcggctacgggtgcagctgcggcgcgctcgacgcgcgtgggaacgcgtcgtacgcgttcaacgtgtactaccaggcgcaggggcaggccgacgcggcgtgcgacttccaggggctcgccgtcgtcaccgaagacgacagggacgtggcgcagggcgcctgcaacttcagcgtgcaggtcgccgccgcggcattggtgggcgccgccgttgccgccgccgcggcggtggcgtgcgcggcggccgtggtggccgcgctccttgcgttggtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0577800, RefSeq:Os11g0577800