Os11g0582700

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Revision as of 09:14, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0582700| Description = Protein of unknown function DUF295 family protein| Version = NM_001074691.1 GI:115486030 GeneID:4350791| Length = 39...")
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Gene Name

Os11g0582700

Description

Protein of unknown function DUF295 family protein

Version

NM_001074691.1 GI:115486030 GeneID:4350791

Length

3989 bp

Definition

Oryza sativa Japonica Group Os11g0582700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23868300..23872288

Sequence Coding Region

23868779..23870257

Expression

GEO Profiles:Os11g0582700

Genome Context

<gbrowseImage1> name=NC_008404:23868300..23872288 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23868300..23872288 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccaactctgcaagtattcaagcaggcgacgaatttcaccttgcaagaggggctcgatctgctccaattatccaatggcgccctgtagtactatagccaggattatgaacttaggggatctagcgagatgtcccaagaatttgtgcaacctactcttcagagtagtacaatccaagctcctagcgccccttcacagtagtttactgaaggaagtgcaaaaagatgatggtgatcagccatcaatggcagagagtgttgtggcaaatttaccagagctgtctcaggacatcttaatggagatatttgccctcctggagatccctgacctcgtgcgtgcaggatcggtctgtaactcctggctctcggcctacaacgaattgcgcagcctaggtatctataaactgtcccagacgccgtgcctgctatacacctctgaatctgctggcgatagcgtcgtgtgtctctatagtcttgtcgagaagagggagtacaagattactctcccggagccacccatacgcagtaggtttctgattgggtcctcacttggttggttgattacagctgatgacttatccgagatgcacctggtcaatccgatcacaggggaacagatagctctcccttctgttaccacaatggagcatgtgaatcccatcttcaatgagtctggtgctctccacaagtatgagttctcactgcacactgcaacgagggttagttatgcagagccatcaatttttgcccttggcgagctgcgggattacatatatagtaaggcttttgtgtttactgatactttcacagggggatgcattgtggttctgatccacgagccagctggtcaaatttcatttgcaagggttggggatgataagtggacatggcatccatcacactctcactattctgactgcatctacattgatggtctactgtatgcactgactgcacagggagaaatccatacacttgatctcagtggccccacgatcacgatgaagatgataattggaagtttgtcttacagtaggtacattgtgcaagctccatggggtggtcttctgctagtttggaggtcagttgaggacattgaggaggattacgaggctgacttgcctgctgaccatgcaacatttgtgcggtatactagggaaattaaaatatatagtgttgatactatggggaaaaaacatgtagagatcaataacctggatggtcatgtgttgtttcttggtcataaccaatcactttgtctcagcacggaacaatatccacatctcaaggaaaattatacctattttactgatgatgacgaagcttggttatttggattcaagaataagcgtcgtgatattggattatttgatttgaaacataacagcagagaggaactcgtgtctcctcagctttggtccaactttcccgctcctgtttggattacacctagtttcacaaagttgaacttcgcctag</cdnaseq>

Protein Sequence

<aaseq>MFQLCKYSSRRRISPCKRGSICSNYPMAPCSTIARIMNLGDLAR CPKNLCNLLFRVVQSKLLAPLHSSLLKEVQKDDGDQPSMAESVVANLPELSQDILMEI FALLEIPDLVRAGSVCNSWLSAYNELRSLGIYKLSQTPCLLYTSESAGDSVVCLYSLV EKREYKITLPEPPIRSRFLIGSSLGWLITADDLSEMHLVNPITGEQIALPSVTTMEHV NPIFNESGALHKYEFSLHTATRVSYAEPSIFALGELRDYIYSKAFVFTDTFTGGCIVV LIHEPAGQISFARVGDDKWTWHPSHSHYSDCIYIDGLLYALTAQGEIHTLDLSGPTIT MKMIIGSLSYSRYIVQAPWGGLLLVWRSVEDIEEDYEADLPADHATFVRYTREIKIYS VDTMGKKHVEINNLDGHVLFLGHNQSLCLSTEQYPHLKENYTYFTDDDEAWLFGFKNK RRDIGLFDLKHNSREELVSPQLWSNFPAPVWITPSFTKLNFA</aaseq>

Gene Sequence

<dnaseqindica>480..1958#actcgcgtggctgcccacccgccgccgtcgccgacaacggcggcgcgaagccgcatcctctccgccgacgagcacgctggcccggagtcgtcgccgcttcaaccgccggccgtcctgtcctcggagatacggcagcgcgtggcggcccccggtggctgtgctacggcggccaaaatcgaccgccggatttcctgtgctccaccgcacggcggcctgacggtggctgcttctcctccgcgcacaaatccactcccgccccccaccatgcacggcggcagcgcttgacggtgagttctccacatgttttccttgctgacctcgattcggaatatggatccgtgtgagccagtatgattcagagtggattcccgggaacaagtctgatccggagtcggatttctcttttgaggacaacaaattccgtttcagttttccttgggtaacttcaggtatataccttgcgtctcttgcttcatcacatgttccaactctgcaagtattcaagcaggcgacgaatttcaccttgcaagaggggctcgatctgctccaattatccaatggcgccctgtagtactatagccaggattatgaacttaggggatctagcgagatgtcccaagaatttgtgcaacctactcttcagagtagtacaatccaagctcctagcgccccttcacagtagtttactgaaggaagtgcaaaaagatgatggtgatcagccatcaatggcagagagtgttgtggcaaatttaccagagctgtctcaggacatcttaatggagatatttgccctcctggagatccctgacctcgtgcgtgcaggatcggtctgtaactcctggctctcggcctacaacgaattgcgcagcctaggtatctataaactgtcccagacgccgtgcctgctatacacctctgaatctgctggcgatagcgtcgtgtgtctctatagtcttgtcgagaagagggagtacaagattactctcccggagccacccatacgcagtaggtttctgattgggtcctcacttggttggttgattacagctgatgacttatccgagatgcacctggtcaatccgatcacaggggaacagatagctctcccttctgttaccacaatggagcatgtgaatcccatcttcaatgagtctggtgctctccacaagtatgagttctcactgcacactgcaacgagggttagttatgcagagccatcaatttttgcccttggcgagctgcgggattacatatatagtaaggcttttgtgtttactgatactttcacagggggatgcattgtggttctgatccacgagccagctggtcaaatttcatttgcaagggttggggatgataagtggacatggcatccatcacactctcactattctgactgcatctacattgatggtctactgtatgcactgactgcacagggagaaatccatacacttgatctcagtggccccacgatcacgatgaagatgataattggaagtttgtcttacagtaggtacattgtgcaagctccatggggtggtcttctgctagtttggaggtcagttgaggacattgaggaggattacgaggctgacttgcctgctgaccatgcaacatttgtgcggtatactagggaaattaaaatatatagtgttgatactatggggaaaaaacatgtagagatcaataacctggatggtcatgtgttgtttcttggtcataaccaatcactttgtctcagcacggaacaatatccacatctcaaggaaaattatacctattttactgatgatgacgaagcttggttatttggattcaagaataagcgtcgtgatattggattatttgatttgaaacataacagcagagaggaactcgtgtctcctcagctttggtccaactttcccgctcctgtttggattacacctagtttcacaaagttgaacttcgcctagaagaagcacttttaagttttcttgtttatggatataatagttgtgtatatttcttcttgttctgtacaatttatatgtaaaattatgattggagaactgaaaggtgaatgagaaggttaggttgctccatatttgtttatttgtaccgacctttcttatgtttatttaaatttctaccgtcttaagggcaaacagcaggtcttgtgtgatagccactttctagggaattagtggaatatacaaggctaatgtgaccaatgttattagaaaatggcaaagctgtaagtgcttcttagagtctaaaataacttaactctgagactctgactgcaatcggcaggatgcctgggctaatttggagaagccttgtggaagcatgttttttagtatcttgaaggacaccatgtacttcatattttacaactacagggatagaagattgagaggtatggactgtgttctagctgccatctatttttattttgaattatgagagaccaagccttctgttccaacgtacttaattcattctagataacaatcgcagggtctgtctaggaaggattatgagaaggaattggagcttgcggacagtgagaaaacaaaaaagcttgaacagaagttgtttcgtggtctttaagattcactagtcctcaaggaggtaggttctcatagtctttccacgtcaagatccagtttgtgttcttttcaccatttgatcttgactaaattacgttttaactttacatgctgctaacgggcaaaaatctgtaatggggctagttttgattcctagcactaatacacttccgatttacttgcaatgatgttcaggtgcaaacactaactcatctcatgtacacatatgcaatcgatgtattagtttagtgctacgcatcatatctgcttgtgctagtgtgtgcccttgctaactgtagatggacccattccttaactgagaattagggcctgcataagatattatccattggctaaaccttatgctcaagcttcagttttcataggtaattttctaaacttctaaacaagttttatgcacattacactgtattggctaaaatcgaaccagcaacagcttataacttcagttattgtgcacccattgttccatgtttatcagtttaaataacacatcccagattattctcctgttctctgagcgaaagtccttttttgcagaaaggagttaaggatggaccatcttagcttgtttcatcaagcatgattttgctcttgtttcatcgtggcagagcgcatgtgctcttatcaaatatggcaactagaattatgttaaggtcttaaggaggtgaggagagtaatgtaagtccaggggacgttgaaggagaaaggatgcagttggatggagctgaatggcagtgttcaccattttgcagctggagctggaaaacattcaggaaatgatagcatccttctgaagcttgatgagataattgcaaaaataaaggtgtttgactatgctcctaaggttaccaatgcttcggctgatttgttttgtgtaaggaaaatatcagagaagctgtctggcgtctgctgttcattgggaagcttgcccctttcatttagactggtcagttgagaaagttttgcttcaactgcaaagactagaagggtgtttgagggctgagattcttccgtgaagtctatggaatttgtacaaaatacaggttaattgccttgccaattgaaacccaccatgctgaaaaatgatcaacacagtcgattcatgacgagtgctacttgcgtgcatttgatgcgatggtcgtccaaaagaaaaaagatcttgtgtgccagggcagaacagaacaagctgggcgggtgtgccctatcatctccaactccaaaattctgaacaagcagaacaagcagggcgtggcgggggtactcaaactcaaataaattctgatggtgtgtaatatacacattgtgtatattctatattctgttctgtgacttccattcagccatgttgctacaatcttggttgttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0582700, RefSeq:Os11g0582700