Os11g0598300

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Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0598300| Description = NB-ARC domain containing protein| Version = NM_001074747.1 GI:115486142 GeneID:4350850| Length = 4269 bp| Definitio...")
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Gene Name

Os11g0598300

Description

NB-ARC domain containing protein

Version

NM_001074747.1 GI:115486142 GeneID:4350850

Length

4269 bp

Definition

Oryza sativa Japonica Group Os11g0598300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24665823..24670091

Sequence Coding Region

24665823..24670091

Expression

GEO Profiles:Os11g0598300

Genome Context

<gbrowseImage1> name=NC_008404:24665823..24670091 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24665823..24670091 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccgagctcgcggctggcgccgtgagctcactgctggtggtcatccgcaacgaggctgtgctgcttggcggcgtccgggacgatgtgcagttcatcaaggaggagatggagagcatgaacagcttcctggggcacctagccaggagcgcgccgcagggtggagagcacgacgagcaggtgcgcacctggatgaaccaggtgcgcctgctcgcgcaggactgcaacaactgcatcgacctctacctctacagcgggaacccggagatccaccgtaccaaaggtagactccggcgacacctctggtgggtctactggtccctgcgcaagatggtcgcgcagcaccgagcggccatccaactccgccagctcaaggaccgggcgcgggacgtcggcaagcgacgactgaggtatggcgttgagatcccagccacgacgaaggcggccgcacctgatgcaacaggtggctatgttgctgaggacgatgaagaagaagatgaagatgaccgcgaaggacaatttgctgtggcaacaccaacgttggcccatcattctgctcgatggcccgtctttgagcccccttctctggacgactacgtggaggcgaagttattggagtggattgggggagttcctggaaacgccatcgtgacgttgtccatcgccattgtagcaccagatgcagataataaggaagtccttgctattgcacatgaaactttggttgctccaaactactactaccgtcgcagtatcatggtcaacgtcccggcggtgcaccttgatgttttaccgcttcgacccaaggaggtcctctactacatcttgcgggagctcgagcgggaagaagcggccggatcgcagaagcagcccacagatcaaggtgaatgggaggaggaggatcctgacccttggcaagattactacaaaaaatgtggcatttaccgtagcaaaaaaagtgtgctcggtaaaatcaaaaggaatataaaaaagatgaatatttacgaaaagcttgataagatcaagagcgacattcgagaaggacaacacaagagcaacaagctgttgctgcttcagctacaaaagaaaggtgcggatcaggtggacctacatgtactccttcagctgttggtgctccagtctcagcaagaccaagcgaagaacaaagcagtagacacccataaattaccagagtggaacgacaacctcatagaaaaattagccatgaggctgaaggatcatatggaagcagatgaaaagaccaagaagcttaatgagcaaactggagtagaagaagaaacagcagtcagacaaggcggaggaggagagagggaggaggatgagaaagacgaaagaggagacggagaagaagaggggaaggaggagaggagggacatggagaaaggaggagaagagaggaaggagcagcagcaggaggagcaggagaaagaagggaggaaggaggaacagaacgaggtaagaaaggagacagaaggaagaaaagaacaagtagcaggagaggaggaagaaaaagaagaccatgatgctgataatgatgaagacagcaatgatgatgatgatgatgaggaggaggaggaggaggacgacgacgatgatgaagaagaaccaattcatcttcatgaagatcaatatgaacaaatcctacgagaagtgttcacaaagaacgccagcagcaaggcccaggagcaagataaattggtggccgagcaagctacaaagactgcagccactacattggatgaggaacgaatcaaacaaatgatcaacgaagcaaaacaagatgtcttaagggagctgcggggacgcgaaactgataagaatcaagcaacaggtgaacctgatgttccacctgataagaatcaagcaacaggtcaacatgcagttgttctggatcaaaacgaagaggcttattttgaagaagtagagcagaagattgaagaaatcaagcaggaacttaaagagcagctgaagatcaaatggatcgtggacaagattaaacatcacttacaggatcagtgccccctcattatcctaaaatttgatcagatgatggatggatcccgatgggaggagatcagaaaggctctgagcctgttagaattgagtgccgatgcattgatcttcaccacagggagcacagaacaggctaaaggatattgctatccaccacgagaacctatagatcactgttctcttgttggtctctactattatacggtgctcaagcttactagcaagcacaagaatgaagacaacgataacgcacagatttttcgtggcatcttggaggagtgtgaggggcatgaattctgcatgaagatcttcactcatgctgtgtatgctaatcccaagaggagcaatgaagagttaaggaagctacacagcaccctgcagtctccaaaaaaatcattcgacaccatagctaagaagatgttcatgtactcttacaatgatctacctaaagaatacaagtcatgcttgctgtacctagctatcttccccaagggacagaagattaggcggtcaaccttgattgcaaggtgggttgcagaagggttgacattcaaggaagattggcccagctctgtgtatcaagcaaatcgatgttttgatgccctcatccgtcggtggcttgtttatcctgatgatattagtgccacaggaaagatcaagagctgtgtggtaggcgatccagttcatgggttcattaccgcaattgccagaaaacaacatattgtggagacacgcctatctcatcacttggctcgccacttctccattttcaatgatcttcgactccgcagctctgatagaattggcacgttcttccaaggcctctcacgatcatctcgagtatccctactcaaggtgctagatctagaaggttgtcagtgctttgctagtaagaatcagcggtacctcaaggacatctgcaacaagatgttactgctcaaatatctgagcctaaagggaacagatattacccagctgcccaaggaaatcaactgcctccgcgagctagaggtattggatatccgagaaaccaaggtgcctgcaaatgcaacagtacatgtcctgctcttgaagctgaagcgtctacttgctggtgctagtcagattgatccaactccaagaaattttgtcactaacgtccggattccttccaggatagacaagatgataaacatagaggtactatctaatgtcaaggcccagcaacatgataatttggaagatattgggaagctatgccagttgaggaagctaggtgtggttattgatggtaagaaaagtcaccttgggagtttgcttaaagcgatcagtgacctacatgcaagcctccgttctctgtcaatcactattcccacaaccacactcgaggttactccttcaagcccagagttacaagatattgcatctcgcctaaaagaccatcctgagtttcttgagagtctaagcatcagtggagccaagcatctttttccattgttgaccaaaggtggtaataagaaacttgccaaggtaactctaagcaacaccccactgaaccaagatgatctgaagttctttgcccagctgcccatgttacagtgtgttaggctccgacacatttcatgcaccgagagtgtgctcaacttcaagaaagatgatttcaaatgcctcaagtaccttcttattgagggctcaaacttgactaatattacttttgaggatgaggcagcctgtgagctcgagaagatggttttatcttccacttgcatagagtctatttctggagttcatgggcttccaaaattcgaagagcttgagttgaacagcagcagctgcggaaggttgctatcatcatgtttttacaatgttgaacgaatagccaagctgactcttcgtggtacattgctgaagcaaggtgatctacgaatcatcgccagggaactaaatatatgctgcctagtgctcttggaaaactcttttgacataagccagaaccagattaccttcgaaaaagaagagttcatatggctcaaacttcttagtgttgattgctctaccatcaccaagattaacttcatcactggatcagctcctaggctcaagaagatcgtctggtcatctttcacctctctctctggcatcaataaccttcctaggttgaaggagctcgagttcaatggatactcagtcccaaatgatgtggaagaagccattaaaaacaataaaagcataaatcttaaacataataaaccataa</cdnaseq>

Protein Sequence

<aaseq>MTELAAGAVSSLLVVIRNEAVLLGGVRDDVQFIKEEMESMNSFL GHLARSAPQGGEHDEQVRTWMNQVRLLAQDCNNCIDLYLYSGNPEIHRTKGRLRRHLW WVYWSLRKMVAQHRAAIQLRQLKDRARDVGKRRLRYGVEIPATTKAAAPDATGGYVAE DDEEEDEDDREGQFAVATPTLAHHSARWPVFEPPSLDDYVEAKLLEWIGGVPGNAIVT LSIAIVAPDADNKEVLAIAHETLVAPNYYYRRSIMVNVPAVHLDVLPLRPKEVLYYIL RELEREEAAGSQKQPTDQGEWEEEDPDPWQDYYKKCGIYRSKKSVLGKIKRNIKKMNI YEKLDKIKSDIREGQHKSNKLLLLQLQKKGADQVDLHVLLQLLVLQSQQDQAKNKAVD THKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAVRQGGGGEREEDEKD ERGDGEEEGKEERRDMEKGGEERKEQQQEEQEKEGRKEEQNEVRKETEGRKEQVAGEE EEKEDHDADNDEDSNDDDDDEEEEEEDDDDDEEEPIHLHEDQYEQILREVFTKNASSK AQEQDKLVAEQATKTAATTLDEERIKQMINEAKQDVLRELRGRETDKNQATGEPDVPP DKNQATGQHAVVLDQNEEAYFEEVEQKIEEIKQELKEQLKIKWIVDKIKHHLQDQCPL IILKFDQMMDGSRWEEIRKALSLLELSADALIFTTGSTEQAKGYCYPPREPIDHCSLV GLYYYTVLKLTSKHKNEDNDNAQIFRGILEECEGHEFCMKIFTHAVYANPKRSNEELR KLHSTLQSPKKSFDTIAKKMFMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIARWV AEGLTFKEDWPSSVYQANRCFDALIRRWLVYPDDISATGKIKSCVVGDPVHGFITAIA RKQHIVETRLSHHLARHFSIFNDLRLRSSDRIGTFFQGLSRSSRVSLLKVLDLEGCQC FASKNQRYLKDICNKMLLLKYLSLKGTDITQLPKEINCLRELEVLDIRETKVPANATV HVLLLKLKRLLAGASQIDPTPRNFVTNVRIPSRIDKMINIEVLSNVKAQQHDNLEDIG KLCQLRKLGVVIDGKKSHLGSLLKAISDLHASLRSLSITIPTTTLEVTPSSPELQDIA SRLKDHPEFLESLSISGAKHLFPLLTKGGNKKLAKVTLSNTPLNQDDLKFFAQLPMLQ CVRLRHISCTESVLNFKKDDFKCLKYLLIEGSNLTNITFEDEAACELEKMVLSSTCIE SISGVHGLPKFEELELNSSSCGRLLSSCFYNVERIAKLTLRGTLLKQGDLRIIARELN ICCLVLLENSFDISQNQITFEKEEFIWLKLLSVDCSTITKINFITGSAPRLKKIVWSS FTSLSGINNLPRLKELEFNGYSVPNDVEEAIKNNKSINLKHNKP</aaseq>

Gene Sequence

<dnaseqindica>1..4269#atgaccgagctcgcggctggcgccgtgagctcactgctggtggtcatccgcaacgaggctgtgctgcttggcggcgtccgggacgatgtgcagttcatcaaggaggagatggagagcatgaacagcttcctggggcacctagccaggagcgcgccgcagggtggagagcacgacgagcaggtgcgcacctggatgaaccaggtgcgcctgctcgcgcaggactgcaacaactgcatcgacctctacctctacagcgggaacccggagatccaccgtaccaaaggtagactccggcgacacctctggtgggtctactggtccctgcgcaagatggtcgcgcagcaccgagcggccatccaactccgccagctcaaggaccgggcgcgggacgtcggcaagcgacgactgaggtatggcgttgagatcccagccacgacgaaggcggccgcacctgatgcaacaggtggctatgttgctgaggacgatgaagaagaagatgaagatgaccgcgaaggacaatttgctgtggcaacaccaacgttggcccatcattctgctcgatggcccgtctttgagcccccttctctggacgactacgtggaggcgaagttattggagtggattgggggagttcctggaaacgccatcgtgacgttgtccatcgccattgtagcaccagatgcagataataaggaagtccttgctattgcacatgaaactttggttgctccaaactactactaccgtcgcagtatcatggtcaacgtcccggcggtgcaccttgatgttttaccgcttcgacccaaggaggtcctctactacatcttgcgggagctcgagcgggaagaagcggccggatcgcagaagcagcccacagatcaaggtgaatgggaggaggaggatcctgacccttggcaagattactacaaaaaatgtggcatttaccgtagcaaaaaaagtgtgctcggtaaaatcaaaaggaatataaaaaagatgaatatttacgaaaagcttgataagatcaagagcgacattcgagaaggacaacacaagagcaacaagctgttgctgcttcagctacaaaagaaaggtgcggatcaggtggacctacatgtactccttcagctgttggtgctccagtctcagcaagaccaagcgaagaacaaagcagtagacacccataaattaccagagtggaacgacaacctcatagaaaaattagccatgaggctgaaggatcatatggaagcagatgaaaagaccaagaagcttaatgagcaaactggagtagaagaagaaacagcagtcagacaaggcggaggaggagagagggaggaggatgagaaagacgaaagaggagacggagaagaagaggggaaggaggagaggagggacatggagaaaggaggagaagagaggaaggagcagcagcaggaggagcaggagaaagaagggaggaaggaggaacagaacgaggtaagaaaggagacagaaggaagaaaagaacaagtagcaggagaggaggaagaaaaagaagaccatgatgctgataatgatgaagacagcaatgatgatgatgatgatgaggaggaggaggaggaggacgacgacgatgatgaagaagaaccaattcatcttcatgaagatcaatatgaacaaatcctacgagaagtgttcacaaagaacgccagcagcaaggcccaggagcaagataaattggtggccgagcaagctacaaagactgcagccactacattggatgaggaacgaatcaaacaaatgatcaacgaagcaaaacaagatgtcttaagggagctgcggggacgcgaaactgataagaatcaagcaacaggtgaacctgatgttccacctgataagaatcaagcaacaggtcaacatgcagttgttctggatcaaaacgaagaggcttattttgaagaagtagagcagaagattgaagaaatcaagcaggaacttaaagagcagctgaagatcaaatggatcgtggacaagattaaacatcacttacaggatcagtgccccctcattatcctaaaatttgatcagatgatggatggatcccgatgggaggagatcagaaaggctctgagcctgttagaattgagtgccgatgcattgatcttcaccacagggagcacagaacaggctaaaggatattgctatccaccacgagaacctatagatcactgttctcttgttggtctctactattatacggtgctcaagcttactagcaagcacaagaatgaagacaacgataacgcacagatttttcgtggcatcttggaggagtgtgaggggcatgaattctgcatgaagatcttcactcatgctgtgtatgctaatcccaagaggagcaatgaagagttaaggaagctacacagcaccctgcagtctccaaaaaaatcattcgacaccatagctaagaagatgttcatgtactcttacaatgatctacctaaagaatacaagtcatgcttgctgtacctagctatcttccccaagggacagaagattaggcggtcaaccttgattgcaaggtgggttgcagaagggttgacattcaaggaagattggcccagctctgtgtatcaagcaaatcgatgttttgatgccctcatccgtcggtggcttgtttatcctgatgatattagtgccacaggaaagatcaagagctgtgtggtaggcgatccagttcatgggttcattaccgcaattgccagaaaacaacatattgtggagacacgcctatctcatcacttggctcgccacttctccattttcaatgatcttcgactccgcagctctgatagaattggcacgttcttccaaggcctctcacgatcatctcgagtatccctactcaaggtgctagatctagaaggttgtcagtgctttgctagtaagaatcagcggtacctcaaggacatctgcaacaagatgttactgctcaaatatctgagcctaaagggaacagatattacccagctgcccaaggaaatcaactgcctccgcgagctagaggtattggatatccgagaaaccaaggtgcctgcaaatgcaacagtacatgtcctgctcttgaagctgaagcgtctacttgctggtgctagtcagattgatccaactccaagaaattttgtcactaacgtccggattccttccaggatagacaagatgataaacatagaggtactatctaatgtcaaggcccagcaacatgataatttggaagatattgggaagctatgccagttgaggaagctaggtgtggttattgatggtaagaaaagtcaccttgggagtttgcttaaagcgatcagtgacctacatgcaagcctccgttctctgtcaatcactattcccacaaccacactcgaggttactccttcaagcccagagttacaagatattgcatctcgcctaaaagaccatcctgagtttcttgagagtctaagcatcagtggagccaagcatctttttccattgttgaccaaaggtggtaataagaaacttgccaaggtaactctaagcaacaccccactgaaccaagatgatctgaagttctttgcccagctgcccatgttacagtgtgttaggctccgacacatttcatgcaccgagagtgtgctcaacttcaagaaagatgatttcaaatgcctcaagtaccttcttattgagggctcaaacttgactaatattacttttgaggatgaggcagcctgtgagctcgagaagatggttttatcttccacttgcatagagtctatttctggagttcatgggcttccaaaattcgaagagcttgagttgaacagcagcagctgcggaaggttgctatcatcatgtttttacaatgttgaacgaatagccaagctgactcttcgtggtacattgctgaagcaaggtgatctacgaatcatcgccagggaactaaatatatgctgcctagtgctcttggaaaactcttttgacataagccagaaccagattaccttcgaaaaagaagagttcatatggctcaaacttcttagtgttgattgctctaccatcaccaagattaacttcatcactggatcagctcctaggctcaagaagatcgtctggtcatctttcacctctctctctggcatcaataaccttcctaggttgaaggagctcgagttcaatggatactcagtcccaaatgatgtggaagaagccattaaaaacaataaaagcataaatcttaaacataataaaccataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0598300, RefSeq:Os11g0598300