Os11g0601600

From RiceWiki
Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0601600| Description = Protein of unknown function DUF248, methyltransferase putative family protein| Version = NM_001074759.1 GI:115486166 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0601600

Description

Protein of unknown function DUF248, methyltransferase putative family protein

Version

NM_001074759.1 GI:115486166 GeneID:4350863

Length

4247 bp

Definition

Oryza sativa Japonica Group Os11g0601600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24971075..24975321

Sequence Coding Region

24971337..24971987,24972090..24972300,24973288..24973963,24974314..24974391,24974806..24975148

Expression

GEO Profiles:Os11g0601600

Genome Context

<gbrowseImage1> name=NC_008404:24971075..24975321 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24971075..24975321 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatcaagggcggcggcgggtcggcggagaacagggggcggagcccgctcgccatggtggtcgccgtcggcctctgctgcttcttctacctgctcggcgcgtggcagcgcagcggctacggcaagggcgacagcatcgccatggccgtgaaccggcagacggcggcctgcggcggcgtggggctgagcttcgagacgcaccacggcggcgccggcgtggagaacgagaccatggcggcgccggcgccggagttcgcggcgtgcgcggcggcgatggcggaccacacgccgtgccacgaccaggagcgcgcgatgaggttcccgagggagaacatggtgtaccgggagcggcactgccccggcgacggcgagcggctgcggtgcctggtgccggcgccgccggggtacgtgacgccgttcccgtggccgcggagccgcgactacgtgccgttcgcgaacgcgccgtacaagagcctcaccgtggagaaggcggtgcagaactgggtgcgacacgagggccgcctcctccgcttccccggcggcggcacccagttccccggcggcgccgacaagtacatcgaccagctcgccaccgtcgtccccttcgccgacggctccgtccgcaccgtcctcgacaccggctgcggcgtggcgagcctgggcgcgtacctggacgcgaggggggtgatcgccatgtcgttcgcgccgcgggactcgcacgaggcgcaggtgcagttcgcgctggagcgcggcgtcccggcgttcatcggcgtcctcggctccatcaagctccccttccctccccgctccttcgacatggcgcactgctcccgctgcctcatcccctggtccgccaacggtgggatgtacatgatggagatcgaccgggtgctccgggcggatggctactgggtgctctccggcccgccgatcaactggcggaccaaccacaaggcgtgggagcgcacggaggcggacctcgctgccgagcagcagctgatcgaggagtacgccgcgatgctgtgctgggagaaactcgccgagatgggcgaggccgccgtgtggcgcaagcgccccgacgccgctgttgtgtcttgccccacggccacgccggcgccgccgaggacgtgcgacgccgccgccgccagccccgacgacgtctggtacaagaagatggagccgtgcatcacgccgccccaagcggccggcgaggtgatgctgcggccgttcccggagaggctgacggcggtgccaccgagggtggccgccggcgaggtgccggggctcaccggcgagtcgtacgcggaggagaacgcgcggtgggagaggcatgtggcggcgtacaggaaggtgaactaccggctcgacgccggccggtaccggaacatcatggatatgaatgccggcgtcggcgggttcgccgccgccgtcttctcgcccaagtcgtgggtcatgaacgtcgtccccaccgccgccgagctctccacccttggcgtcgtctacgagaggggcctcatcggcatcttccatgactggtgtgaggcattctccacttacccaagaacatatgacctcatacatggcaatggtgtcttcactctctacaaggacaagtgcaagatggaggacatcctgctggagatggatcggatcctgcggccggagggcacggtgatcctccgggacgacattgaggtcctcctcaaggttcagaggatcgcgagcgggatgcggtggaagatgatcatggcgaaccacgaggacagcccccacataccggagaaggtgctctacgccgtcaagcggtactggaccgccgacgacaagagctcggagccggagccagagccggagaagatgaagaagaaggcggggagctcttcacaagagaggagctccgaggaggaggaggagagtacagcaagttcttcagaagagaagggttcagaggagtaa</cdnaseq>

Protein Sequence

<aaseq>MAIKGGGGSAENRGRSPLAMVVAVGLCCFFYLLGAWQRSGYGKG DSIAMAVNRQTAACGGVGLSFETHHGGAGVENETMAAPAPEFAACAAAMADHTPCHDQ ERAMRFPRENMVYRERHCPGDGERLRCLVPAPPGYVTPFPWPRSRDYVPFANAPYKSL TVEKAVQNWVRHEGRLLRFPGGGTQFPGGADKYIDQLATVVPFADGSVRTVLDTGCGV ASLGAYLDARGVIAMSFAPRDSHEAQVQFALERGVPAFIGVLGSIKLPFPPRSFDMAH CSRCLIPWSANGGMYMMEIDRVLRADGYWVLSGPPINWRTNHKAWERTEADLAAEQQL IEEYAAMLCWEKLAEMGEAAVWRKRPDAAVVSCPTATPAPPRTCDAAAASPDDVWYKK MEPCITPPQAAGEVMLRPFPERLTAVPPRVAAGEVPGLTGESYAEENARWERHVAAYR KVNYRLDAGRYRNIMDMNAGVGGFAAAVFSPKSWVMNVVPTAAELSTLGVVYERGLIG IFHDWCEAFSTYPRTYDLIHGNGVFTLYKDKCKMEDILLEMDRILRPEGTVILRDDIE VLLKVQRIASGMRWKMIMANHEDSPHIPEKVLYAVKRYWTADDKSSEPEPEPEKMKKK AGSSSQERSSEEEEESTASSSEEKGSEE</aaseq>

Gene Sequence

<dnaseqindica>263..913#1016..1226#2214..2889#3240..3317#3732..4074#tgaatccaagatccgcttctttctcctgcggttgctctgcgctctcagcaccaaccaaatccccctccaattcctcatctttcttgaccaattcttgaaatcaatcagacgcaataatcaaccactattcttattatagttggatcataattaatcaaggttccgtgcgtcgccactgtgatttgtgcacttgcatttgatcgaattcgttgccgttgattgcgtttcttgatgttgtgtgttgcaggtttgaggtggatccatggcgatcaagggcggcggcgggtcggcggagaacagggggcggagcccgctcgccatggtggtcgccgtcggcctctgctgcttcttctacctgctcggcgcgtggcagcgcagcggctacggcaagggcgacagcatcgccatggccgtgaaccggcagacggcggcctgcggcggcgtggggctgagcttcgagacgcaccacggcggcgccggcgtggagaacgagaccatggcggcgccggcgccggagttcgcggcgtgcgcggcggcgatggcggaccacacgccgtgccacgaccaggagcgcgcgatgaggttcccgagggagaacatggtgtaccgggagcggcactgccccggcgacggcgagcggctgcggtgcctggtgccggcgccgccggggtacgtgacgccgttcccgtggccgcggagccgcgactacgtgccgttcgcgaacgcgccgtacaagagcctcaccgtggagaaggcggtgcagaactgggtgcgacacgagggccgcctcctccgcttccccggcggcggcacccagttccccggcggcgccgacaagtacatcgaccagctcgccaccgtcgtccccttcgccgacggctccgtccgcaccgtcctcgacaccggctgcggcgtaagcgacatcatcgccgaccacgcgcgccgccattgattcattccaccatagctcgctcgctcgctcatggaggtgttcgtccgtgcgtggcgtgttcaggtggcgagcctgggcgcgtacctggacgcgaggggggtgatcgccatgtcgttcgcgccgcgggactcgcacgaggcgcaggtgcagttcgcgctggagcgcggcgtcccggcgttcatcggcgtcctcggctccatcaagctccccttccctccccgctccttcgacatggcgcactgctcccgctgcctcatcccctggtccgccaacggtaagccctaccctcaccgccaccgccgccgaacacgactcccaatgcacacatatactacctctgggggcaactccaaaatttaagattagggggtgtggggtggggaagaggccataagaccgaataaccaatatcgatagcaaatgatgtcaaatagtcaccgttaataacaatcaatgtgtaaaatagttctttaaaaaaaacttaaattttagctttttaataatatcattaaaagtttggaactagactttattactaaatccttttaatgtaaactaatgaataatctcacaaataagaatcttctattttactttaaaaagatgagaaatcacaaagtaattttgtagatcatgtttcttgctaatgtttttagactttctaactaactaaattgataataattgtaagctacacaaataaactagataaatacatatcttagttagcctcaatatagagtaaaaacaggaggcgtgatggtggcggtgttcgtataggggggtgttgacctcctctggcacccccatagttgcgccactgactacctcaatttcaaaatgtgagacaccattaacttttcatatgatgttcgatcattcgacgaatttaaaaatttagtatatatatgcacaagtataagttaagactatagtttctttagtggtaaaacaagtcagaacaaaataaattaaattatagttatatttttttaataagacgaatagtcaaacgttatatgaaaactaaatggtgaatcgtcatacatttttaaatggacggagtatatgctgctccctccgtcccataaaaaccaatgtgacacattctagtactatgaatctagacatatccatgtccagatttgtagtactaaaatatgtcacatccagtcctagatttttttttttttgagatggagggagtatgtagcaagcgagcatgaactttgatgcacatgtcgccggctcgcgcgcgcaggtgggatgtacatgatggagatcgaccgggtgctccgggcggatggctactgggtgctctccggcccgccgatcaactggcggaccaaccacaaggcgtgggagcgcacggaggcggacctcgctgccgagcagcagctgatcgaggagtacgccgcgatgctgtgctgggagaaactcgccgagatgggcgaggccgccgtgtggcgcaagcgccccgacgccgctgttgtgtcttgccccacggccacgccggcgccgccgaggacgtgcgacgccgccgccgccagccccgacgacgtctggtacaagaagatggagccgtgcatcacgccgccccaagcggccggcgaggtgatgctgcggccgttcccggagaggctgacggcggtgccaccgagggtggccgccggcgaggtgccggggctcaccggcgagtcgtacgcggaggagaacgcgcggtgggagaggcatgtggcggcgtacaggaaggtgaactaccggctcgacgccggccggtaccggaacatcatggatatgaatgccggcgtcggcgggttcgccgccgccgtcttctcgcccaagtcgtgggtcatgaacgtcgtccccaccgccgccgagctctccacccttggcgtcgtctacgagaggggcctcatcggcatcttccatgactggtaaattcaacctgcatttccatttattgctttccatgacctgaatattactacctcttgtttctctctgtataacgttgattacttttcacgtaacgtttgatcatttatcttattaaaaaatagtataaatatataaaagtataagttaagattacatatagtttctttgattataaaagacatgtcacaagaaaataaataacatttatattgtttttttataagatgaatggtcaatcgtcatatcaaaagtcaattgtgacatacattaaaaaaacaaagggtgtattatccaagaatatgtaaatatttttctattgattatttttcaccttcttctccttcaggtgtgaggcattctccacttacccaagaacatatgacctcatacatggcaatggtgtcttcactctctacaaggacaagtgagtctcactcacattctgttcatatctgtttcttgattgcttcctcagtaagaaataagtaaggttttgaaatacatgtagtcaatgcatttaaactttgactatcaatatctctttgaaatttttttggttcagttctgaaaatgctatgattgtatttttctacaaaattactttcaaaataatataaccttcatacatttttatgataataattaacaattcaactagtgtcttgtaaccatgttaatgtccaaaatgatatacttatttatcactggaggaagtatatgctaatcatgctgctatgctctgttgagtgatctctgaagtgatgagaaattatgaattcttgctgtttgatgatgttctgtgcctaaacaatttgttggttttaatgtgtgagagaaggtgcaagatggaggacatcctgctggagatggatcggatcctgcggccggagggcacggtgatcctccgggacgacattgaggtcctcctcaaggttcagaggatcgcgagcgggatgcggtggaagatgatcatggcgaaccacgaggacagcccccacataccggagaaggtgctctacgccgtcaagcggtactggaccgccgacgacaagagctcggagccggagccagagccggagaagatgaagaagaaggcggggagctcttcacaagagaggagctccgaggaggaggaggagagtacagcaagttcttcagaagagaagggttcagaggagtaagaggtgctgatcatgtgtgattattttcagttgttggggagttcaattcttttcagtgtgataggggagatcaggagttgtgttctttcgatttgatgattgtcttaggatgaacaatatgatgttcggtagcaggacttagcatttccatagattcaagaagcatatacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0601600, RefSeq:Os11g0601600