Os11g0615700

From RiceWiki
Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0615700| Description = Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5)| Vers...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0615700

Description

Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5)

Version

NM_001074810.1 GI:115486268 GeneID:4350922

Length

4304 bp

Definition

Oryza sativa Japonica Group Os11g0615700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25780779..25785082

Sequence Coding Region

25781060..25781152,25781252..25781317,25781709..25781811,25782470..25782528,25782993..25783094
,25783176..25783289,25784241..25784321,25784648..25784729,25784877..25784890

Expression

GEO Profiles:Os11g0615700

Genome Context

<gbrowseImage1> name=NC_008404:25780779..25785082 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25780779..25785082 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcctcacgaggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtcgagtacgccattgaggccatcaagttggggtcaactgcgatcgggttgaagaccaaggatggtgttgtccttgctgtagagaaacgtgtgacctcgccactgctggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagtggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccagaatcataggttctcatatggggagccaatgacagtagaatctactacacaagctatctgtgacttagctctgcgttttggtgaaggtgatgaagagtcgatgtcacgaccatttggtgtctctctccttattgctggtcatgatgagaatggacccagcttgtactacactgacccatcaggaaccttttggcagtgcaatgccaaggcaattggatcaggttctgaaggagctgatagctcattacaggagcagtacaataaggagttgacccttcaggaggctgagaccatagccctgtctatcttgaagcaggttatggaagaaaaggttactccaaacaacgtcgatatcgcaaaggtttctcccaactaccacctctacacccctgcagaggttgaagctgtcattgcacggttgtga</cdnaseq>

Protein Sequence

<aaseq>MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKD GVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFS YGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTF WQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKV SPNYHLYTPAEVEAVIARL</aaseq>

Gene Sequence

<dnaseqindica>3931..4023#3766..3831#3272..3374#2555..2613#1989..2090#1794..1907#762..842#354..435#193..206#gcatgtaagtggcacgccgcatcgtccctctcgtctcggcttggtccgcaagaagaacaacaccgcgagagtaaaagcaccccctcctcttcgtctcggctttcggagctctcgatactttagccgcgattcggagggaaaccctagctagctcccgctctcgatcccgcgcccgccaccgcactcggcaagatgttcctcacgaggtaatcagatcgtgtctctctcgggaaggcttttcgattttgttgcgggaactcgattcgattcgatctgtgggcgagttggggacgatggagatgttgattttgttgggattttgtgggtgattggtttgtgttgggtggatgcaggacggagtacgaccgcggggtgaacaccttctccccggaggggcggttgttccaggtcgagtacgccattgaggccatcaaggtgagccgtcttcccttctgtttttgtttgctgtatctgagggagaagatgtgatggtagattgtgtgagaattaggggtttctctctaagggtaggttctagatttgcaggatgagttgggcgtaaatctcaagtgtgaggtttttggtggcgaaatttcaactatagatctataaattttggatggggttcctcgagaggtttttggcctgtatatagctagctctagcgagatgtgatgtgcgacttgctgtagcgagatgcgtgctgtcttttcatgtgtaactggtgttaatgatgctgatcctgctgctatgtactgtagttggggtcaactgcgatcgggttgaagaccaaggatggtgttgtccttgctgtagagaaacgtgtgacctcgccactgctggtaattgcatcttatcctatttcttctatcaggctggtgcaattgttcaatagcacctatgattgctcactgcattttgacaatttagttcaagatttgactgaatttatctagctaatgtttgaattatcgatttcttaccagttcaggcaagataaatcttatccttaggtagacctgtattcttacatgattccatcaggatgatcctgtaaaacatggatgttgctggtgttgttcctcatgatcttgctgctttcatttttcacaactacatgctttttgtaatctccaacaaacaaaaagatgtagattagataatgctgtttagagtaattctgatggagtctcaatcttgttgaattttatgatttaataatatgatcagtttttctggcatgtgttatttttatttatgcaaatgccaacaaaacaaggacattcagtcaaacaaacacagaaatccaagtatttcacatgtcaaagcctggaacctaatggttcatggatatttttatttaaaaataaacaaggaatatattgcaactgaactctgaagtgctcatataggagttctttttcggttaatgcataaacaattcttttctttcagcaaatagcccagtttgtttttcttgtacgtcagctttatgggttgtgacaatctgacaatttattatatcttactctctgcgtactgtagtactttgtatgtcagtgctgttgttttttttgtttaaatgatatcatgtagaagtttttttacaccctataggcctattgcccatatatgtgttatgttaattaagaagttacgtaatacctctgcataatttgtaaaagttaactacttgattctgacagaacttgatgttagactcccatttcactcccaagtttctagtttttgtgtgtgatgccactcaagttatcttttctatgattatgcaggaaccaagcagtgtggagaaaatcatggaaattgacgagcacataggctgtgccatgagtggccttattgctgatgctagaacattggttgagcatgctcgtgttgaaacccaggtacgttcttatgcaattttctacatgttttacatattatggtcattgtatgttaatttcacctaatgtgtttataatcagaatcataggttctcatatggggagccaatgacagtagaatctactacacaagctatctgtgacttagctctgcgttttggtgaaggtgatgaagagtcgatggtgagtctcatttgcatgaaaacaaatattttgtgaaggatcaagattcaaaaattaattagcaggggagcccttttttcacttttgcattttgataaataggattaacaccataactttgcatcagtgtgttatctttggaggaaactacgcatctagaaattttgggtgtttcaaataatcccatgatggccactaatactgaaaattatgaatagataggctgtaaattaatcattttttctgcattttgttttgtcttttattatgtgactattgtcttattaaggcttagtggacatatgaattagttttctaaggagtaattgctaaaatacctgactataacaattttgcttcaccccactgggccactgcaagttactttgctgcattcttttcacccttttgtcgacatttcttgttgccaagcttaaactaatatacttgtttgttttgtgcagtcacgaccatttggtgtctctctccttattgctggtcatgatgagaatggacccagcttgtaagtatttatccctttttaccaaaggaatttccatacattagcgatatctagatacctcttctgtggttctgccctatgcgaccatttgttcccacttcccagatcgcatgaactaacctttatcgctccaagttattttgagtatttgtcgaggaaataactctataacaaaatggtcaggacaatagccattttcattcatcttgttttgttccattgctcttaaattaagttgatgtgagtatcatcaaatttaactttgatggtttctagaatagctagttatttttcgcttgaagattcaacaagtttttcaaaactcagccacagtcggcatttgaaaacctggtatatcaaagaagagttgtccaaatgttgcccatatgaggttctatagactatatacattgatacttttatttccagtttcttcataaggagcagtgtcatgtcatttttttcctgaatccagataagtgataggtattatgtatttcattgtagctgaggttctttattagtggtaagtagtggtaatgctgccatcatggcatctctatccagagacaggctcatttttcccgtcatgattgctttacaaggccaactagactctccttgtaccaatctgtggatgaattcctatgttttgcaggtactacactgacccatcaggaaccttttggcagtgcaatgccaaggcaattggatcaggttctgaaggagctgatagctcattacaggagcagtacaataaggtactatccattaagctaatgctaatcacacagttttgaagaacaataacagataggaaattataaggagatgcaaatatgcaagacacttttgtttgagtgccaaatcaatatgaaaaaaaaatctgagtatcttggagaaaatatgttgtgtatgagccgtagtaatagaactatgcagcaaggtttgatccaaatttgaagtcccaatcttttattacagttgaaatacttctcagaagccagtttcacactttacctatccacttagcattactaaatttgctgccattatttagcaggattcatgccaattgaattgtttatttagagcttaacggtttttatatatgaaaagaaaaggaatattgagaatgctatctttatgcaggagttgacccttcaggaggctgagaccatagccctgtctatcttgaagcaggttatggaagaaaaggtatggtgtcgcaagccacttcatatttcagtttctcatttctatcacaccaaaagaaaatttcctagacatctgagtttatctcattctgaaccacaggttactccaaacaacgtcgatatcgcaaaggtttctcccaactaccacctctacacccctgcagaggttgaagctgtcattgcacggttgtgagaagattgccatcgcgtgttattttaatcagccctaagacagcctctgtatgaacttcctaaatggattatcagtccattgtttgctatggctgtcatgttatgttaacaagatagtggctgctagagtttattactggctctaatagtctggtgtgcagcccagtcatttgcttgttttcagcagtgttgagaccatgtactatcaaaaagagaacgacaatcctttccaagatttggttgcaacatttcgacagtcatcttgatcttcggtttcttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0615700, RefSeq:Os11g0615700