Os11g0618500

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0618500| Description = Protein of unknown function DUF594 family protein| Version = NM_001074819.1 GI:115486286 GeneID:4350932| Length = 44...")
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Gene Name

Os11g0618500

Description

Protein of unknown function DUF594 family protein

Version

NM_001074819.1 GI:115486286 GeneID:4350932

Length

4438 bp

Definition

Oryza sativa Japonica Group Os11g0618500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25920258..25924695

Sequence Coding Region

25920427..25921734

Expression

GEO Profiles:Os11g0618500

Genome Context

<gbrowseImage1> name=NC_008404:25920258..25924695 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25920258..25924695 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaatatggtgcatgtcccaaaatcagtacgagacaggccctcgggcccgttttagttattcgctgcactcatttggttacgattcaggtatcactgcagcagccatgtacatagtaatgattgatgagatttttaggatgctcgggtacttcctatcaaggtgggcaaaactaatagccatgtgcaactttgtgaatttcagaaacagatggctgaaatatgtcattgtgaatacacctgccagatatggggaaagaactatagttatacaccagcatgccttcctgcaaacgttcagctcaagcatctcggggtggaaaatattctcttgtattttagaaagaaatcaaaatgcaagaatggtttggtcagaaggaaaaatgaatgacagtatggccaagaatgtgaaggcagcagtaattcaagcactccgctccatggatctcgagggtcatcttttgtcaagagacctccctttgtctcgtgtcagtgacagagcagagcgttattggttggcatgccttgcagaggtaccaacatgctcccgtgttattctggtctggcacatcgcaacaagcctatgtgagatcaagcttgccaatgaccataaaatcaacttaacaacaatgtcaagattatcatcgtttctggtggatgaaaaagctcttacaggtgagcttcaaaaggcatacacagtgtcaaattgcttatcatggtactgtatgtacctgctggcttcaaagcccaaactgctcccagaaaccattttgatgtccaagaaggcctttcaagatgctgttcagtgtgctcatgaaatgctcagtgattgtcactcctggcagagcatatacaacaagcttatgaaagaggcgcagaaagctcttgttcaaggtacgcatggtctaaatctgagtggaaacatattgcaacaaggtgctatactggctaatgaactcatcaagaaggaggaccaaaaatgtcgttgggagatcctatctgatgtgtgggttcacttgcttgtgcacattgctcccagttctgacgcagcagctcttgccgaggacctcaaatccggtgtcgagttcgtaaccgtcatctgggctttgttttgccactgtggcatcgagaagagcaaattatggcaacagcagaagagtgcaaatttcaggaacagcactcctggaccatctaatcagagcagtgatgtgtctacccatgttcaggacacagtcagctctagtccacctgctgctcgatcttcagaaattcatgtagaggctagtcctacttctggtatgtcctga</cdnaseq>

Protein Sequence

<aaseq>MSIWCMSQNQYETGPRARFSYSLHSFGYDSGITAAAMYIVMIDE IFRMLGYFLSRWAKLIAMCNFVNFRNRWLKYVIVNTPARYGERTIVIHQHAFLQTFSS SISGWKIFSCILERNQNARMVWSEGKMNDSMAKNVKAAVIQALRSMDLEGHLLSRDLP LSRVSDRAERYWLACLAEVPTCSRVILVWHIATSLCEIKLANDHKINLTTMSRLSSFL VDEKALTGELQKAYTVSNCLSWYCMYLLASKPKLLPETILMSKKAFQDAVQCAHEMLS DCHSWQSIYNKLMKEAQKALVQGTHGLNLSGNILQQGAILANELIKKEDQKCRWEILS DVWVHLLVHIAPSSDAAALAEDLKSGVEFVTVIWALFCHCGIEKSKLWQQQKSANFRN STPGPSNQSSDVSTHVQDTVSSSPPAARSSEIHVEASPTSGMS</aaseq>

Gene Sequence

<dnaseqindica>2962..4269#agttgcttttcccccattttctccgctgtatccgccgctcgccggcggggagggaggtccggaggaagtgaaatggcggcagtcgcagcggtagcgatgggggtcaagtcggggatagtactgcggcggcggcggcggcggcggcggtggtgagcgtggccggcactcgaggagggcgctccacgggggcatgcttgctgggtcggccatggccttggcgtctcgctcaatgggactccatggtgcgatgtggagctctctgtttctctgattcatcgcggtaaaattttcgcagctcagtccgatctcctcttttttttttcaaaaaaatatatattccggtgcatttctcctcaaatcatgaaataatgggatagggacagtaatcctagattatcgaatggagtaatggacaaacaaatcatggaagggaacagcagttttgacttttgattcaatggttttcttttttatgtaactcgaatagttttctggtatatccagatggatgagcaagtacagatccgacacctatacctgccatattcagtctgctcatgtgaaagctggacatatgattttttttttctgtgattgcttccaacaccattgcagtattacattaaaactgctttggtcatagatgcagagtgtagcaagacagctctgccagaattttttattccgtggcaaacgccatattttaggaagtgtgttaaaaataaagactcatcattcatcaaggcctctaccgcgggatgcgtggttcaattttataatcgctatatcgaattggaggtaatggaggaacttggcctatgacaacttgccagtttccagatcccagtgctgccttctcggctcaaggtcttgcctagagttctctccatctgcccgagctgtggataatacgccatgagaagctgctgaattctgaatgggtaagattgactccttttcgccatactaccgcagtttctgatgcatctgtattgcatgcttgaatcacccgctgcctggatttttcttgtagctgccagcaacagattgcatgaaaaatataacatgcttgcttttcactggctctgtttgtgcagtcagagttcgaaatagcagctgcttggttactggttaggaagagttttcttagtagttacagttttttgcaggtcaaaagcagagcacacattgtcaacaccattttaactgacacaagattgtcaggaaatcataacaaggtccaaatagatagataaacattgctgtggaccgcagcaaggttgccaagcacaagctgaagcaggtacacccatcgtttgctctactcattggctaattggctagaaagtgctacatagatttgtgtagattgtgtcatcataagctaatttgtccattctatccaaagaattgtagcttactgttactgactactgatcaagagaaggatcaaaccgtatagtgaatgaaatgcacaagcaagaagcctcactgtatataaatatttttaaatatggccactaatatattttcagatttctagggcaggtcatggaaaacctcactgtatttatcttctacctagaaaagcagttatattttgggacggagagagtatttcactaatcaataataagttgaactataaaggtaactatattttgggacgaagagaatatttcattaagcaataataagttctccactttcaaatattgattattcgttagcaccaccacccatctcatcccatacaggcctgtgaagcatgtaaatcttgttacaatggtccagtatagcattgtcagcataagttcatgacccttcattgcacttgttatatattctgtaacctatatttctgatgaagtttctctataagtttaatttgccagggtctgcggttaattttgactacacacttttctgtgggaaaactaaaaatgagtcctggtgctcttattgcaaactttcttatcaaatggaatctggagagctatgtcttgcttcgcatccgagtcataatgggaatcctcaccatcctctatctgatgttcttcttctcaagccttttcttcacccgtatatacagatccatggtgaacttcctggatcctgtggctgacgccacccttgtatacattatgggggctatgcaagctgcacctttaaataaccagctgttcccagtctgggcccttatactggttggtctccgctctagcatccatggccgctctagttctggaatgttttttgagctgagaaatgtgttgaagcttttagttgtggcatacatgaatttaacacgtggctccaaattgtggcgttttccattttggttcttttggggtcttctggtacttcagtgcttctacaagattctggtgcgccatatagcatccaagtccttgtggaatggtcgtagttcagaacttcttcaggagtacatgggtgccaatggtaacaagagcaactttaatcctgaaatatgcaacccagagactatggaaggatacaagtacttggtttatggagagttacagaaaagccgaaagagtgcacacattctaaaagttgaagacttgaagtccctagttaccttggacaagatttggcgatgtgatagtgccttgctgctaacctccatcaacatgcaggggaacaacatgaaggacatggccctggcatttgcattatctcggttgctccggtgtaggctggaaggagcaacgttgcatgaagctactgtttccatgacccgaaagctaatcagcaagatgatcctctcagatagtgctgacaaggtactgttcggtatcctggagctggatgtcaggttcctccgggattccctccactccagttatcctatggtcttctgcagagggcttctttcgctcttcttcactcttctgctgtctttggtgaagtttttcatggctacatggctttttgtagatgtcaatatggtgcatgtcccaaaatcagtacgagacaggccctcgggcccgttttagttattcgctgcactcatttggttacgattcaggtatcactgcagcagccatgtacatagtaatgattgatgagatttttaggatgctcgggtacttcctatcaaggtgggcaaaactaatagccatgtgcaactttgtgaatttcagaaacagatggctgaaatatgtcattgtgaatacacctgccagatatggggaaagaactatagttatacaccagcatgccttcctgcaaacgttcagctcaagcatctcggggtggaaaatattctcttgtattttagaaagaaatcaaaatgcaagaatggtttggtcagaaggaaaaatgaatgacagtatggccaagaatgtgaaggcagcagtaattcaagcactccgctccatggatctcgagggtcatcttttgtcaagagacctccctttgtctcgtgtcagtgacagagcagagcgttattggttggcatgccttgcagaggtaccaacatgctcccgtgttattctggtctggcacatcgcaacaagcctatgtgagatcaagcttgccaatgaccataaaatcaacttaacaacaatgtcaagattatcatcgtttctggtggatgaaaaagctcttacaggtgagcttcaaaaggcatacacagtgtcaaattgcttatcatggtactgtatgtacctgctggcttcaaagcccaaactgctcccagaaaccattttgatgtccaagaaggcctttcaagatgctgttcagtgtgctcatgaaatgctcagtgattgtcactcctggcagagcatatacaacaagcttatgaaagaggcgcagaaagctcttgttcaaggtacgcatggtctaaatctgagtggaaacatattgcaacaaggtgctatactggctaatgaactcatcaagaaggaggaccaaaaatgtcgttgggagatcctatctgatgtgtgggttcacttgcttgtgcacattgctcccagttctgacgcagcagctcttgccgaggacctcaaatccggtgtcgagttcgtaaccgtcatctgggctttgttttgccactgtggcatcgagaagagcaaattatggcaacagcagaagagtgcaaatttcaggaacagcactcctggaccatctaatcagagcagtgatgtgtctacccatgttcaggacacagtcagctctagtccacctgctgctcgatcttcagaaattcatgtagaggctagtcctacttctggtatgtcctgaaacctgaattgctgatggctgatgctctgctcccctcatggtttcagttttgtcggtaaaatttgcatctcatcatgacatttgaacactagtatttgtttcttgtgtgaatgttttctgtgttgtgattgtaacaggggaatgctcttgatgcaatattatgtgttat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0618500, RefSeq:Os11g0618500