Os11g0616900

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0616900| Description = Conserved hypothetical protein| Version = NM_001074816.1 GI:115486280 GeneID:4350929| Length = 7296 bp| Definition ...")
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Gene Name

Os11g0616900

Description

Conserved hypothetical protein

Version

NM_001074816.1 GI:115486280 GeneID:4350929

Length

7296 bp

Definition

Oryza sativa Japonica Group Os11g0616900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25844207..25851502

Sequence Coding Region

25848980..25849202,25849806..25849908,25850019..25850808

Expression

GEO Profiles:Os11g0616900

Genome Context

<gbrowseImage1> name=NC_008404:25844207..25851502 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25844207..25851502 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagggattccgatccagttccgggggtcattctcgctggagatgccgttgctctggtctgccctggagggtttcctcccagaagcggcttctccggccaccttccgtcgggcagcctggctcgctctggtttggcggatggagcagaggcgcagtgtgcactccgccgtgtcgcgagtggccggcgcagattccttctgggccggcgagccatccagacaaggctttcacagtttcactcaagtactcaaccttgactatgagaggcactgctcttcatcggcttgatgtgtgttcacacatcagctcatcagctgcgagactcaggctcctattggtgagcttcatctgcaatctgcacgccagcagcggactgggccttgttactagactcagactcctcttcttgagcctgatctgcgatctccacgtcagcactgaagggagtgtggacgttgttgccaggctcagactcctcttcttgagcttcatctataatctccacaccagcagcagaagtttggacattgctgccaggctcagactccccttcttgagcttcatctgtaatctccatgtcagcagcagactgagcgtggatgtcgttgccaggctcaggctcgtcttctcgtgcttcatctgcaatctccacatctgcttcagcagcttgctgcagcacctgctccgctggttgattctgcacgcctgcttcacgagcttcaattccgttttgggcatcttccaccatcgcatcatcttcgacattgtggccaccctgaggttcttctgctgcaggctgaggctgaggctggacgttggcatctccaggcgcatcgtcctgatctcgccacaggctgctcttctcgatgccgcagtaccagagcaatccccagatgaaggtgatgagctcccctccgtactcgaggcaaatcttgtgtgcctcagcgttccagctgggcgcaatgtgcacgagcaaatcagcccatacacccgccaggatttgccaccgctgctgatcgtctggaattgtttcaagcaattgccttcccagtaccgcgcctttctctacgatggtcccgttcagttttttcagttcagcagcttcgggtga</cdnaseq>

Protein Sequence

<aaseq>MEKGFRSSSGGHSRWRCRCSGLPWRVSSQKRLLRPPSVGQPGSL WFGGWSRGAVCTPPCREWPAQIPSGPASHPDKAFTVSLKYSTLTMRGTALHRLDVCSH ISSSAARLRLLLVSFICNLHASSGLGLVTRLRLLFLSLICDLHVSTEGSVDVVARLRL LFLSFIYNLHTSSRSLDIAARLRLPFLSFICNLHVSSRLSVDVVARLRLVFSCFICNL HICFSSLLQHLLRWLILHACFTSFNSVLGIFHHRIIFDIVATLRFFCCRLRLRLDVGI SRRIVLISPQAALLDAAVPEQSPDEGDELPSVLEANLVCLSVPAGRNVHEQISPYTRQ DLPPLLIVWNCFKQLPSQYRAFLYDGPVQFFQFSSFG</aaseq>

Gene Sequence

<dnaseqindica>4774..4996#5600..5702#5813..6602#cggtgaggcggccgccgcggcggcggcggcgaccgacgggcggcgatgcggaggagacggtggagaggagtgattccgttctactcccgggcatcactctcctggagcttccgttgctccggccggcgctatcatgccaccggggtttccgactttccctcccagaaggctttccctccccgtctccggccaactctggtctccggccatctcctcgtcggcgggggcaacctagcagtggactagcggaaggatcggaaggccacattcccaggtgtacccaaaaccctactaattttcctccattaattaattcactgccatgctattgacgcttgtttggatctggcttctctcgatgagacgaaaagaaaaggggggtaaatcatgtaggctagtacaattaattgttattttgatttgcggctatctgtaatttactctaggatagtacgaaaatcatgcagtttggatttgtcctctttgaggccttgtttagttggggaaaaattttgggtttagttgtcacatcggatatacggatagacatttgaattattaaacgtagtctaataacaaaacaaattacagatttcaccaggaaactgcgagacgaatttattaagcctaattaacccgtcattagcaaatgtttactgtagcaccacattgtcaaatcatggcgcaattaggcttaaaagatttgtcttgcaatttacacgcaaattgtgtaattggtttttttattttgtccacatttaatactctatacatgtgtccaaacattcgatgtgatgggtgaaaaaattttgttttgtgaactaaacaatgcctgagtaggatgtagttgggtttgtagttaatttgtataccttgccagaaatggttttttttagataatggaataataaacatcccggcctctgcatcttgcactgcagaaatgcttgcaaaaatggacaggccatgatgggtaggggtagccacaatggcagccagagcgtttggcacccaaataatttgtttcctcaagaatgtggaaaccacaaacatctcagactaaattattgaattcaggcttgactattgtgaactgaacataaactcaactttgcaaaactcaacataaacacaatacacaaagaaagtttcatatccgtggagcactttgcttgccacacaaatttcaggagaggggagatttcacaccacacaagttgagtaatcttgtagtttattcttcttgcttcaagagatagagcttcctcagcttcactcaaccctgacgatgagaggcactgctcttcatttcctcgatgagtggccacacatcagctgcgaggtctggacgatgtttctcatttggatcactgcatttcaatcccaggaacagcatctctgcggcgtcatctaactggcatttcttcaggtcaggatccacaatgctttttaggacctcatgttgctgctccatgctctttccttggaatcgtataatatctcctagtttgctgagcacattctttctcaaatcctttggttcttgtgctgtaacaagttgcaaaagtataatgcccagagcggacacatctaactgagtcttgtgggtgtcagaaccaatcaacattcttgcaaatcccttaacaccaccccaaaacgagacaggtttggaagtgtattgcagcagatgggacatggtaaagttgctaagcttgcatacattgtctttgctgaagaggatgttgctcgttttgagattaccatggacgattgggtagggctcggtgttgtggaggaagatgagagcggagcatatgctggaggcagctctcactcgtcttttccatgtgaacctcctcctttgtccactttcagtgaggtgatctttcagggagccattaggcaagaactcgtagatgagtatctgtctctctggacatgctcctatgagggtgacaagattttgatgccggatctttttgaggatggcaacctgcattttcagagctcttctatccgagaaaatgagaagaatattgtacggtagctctaacttgcgggaaaattaatatatgaacaattcaggtaggcataaactttcttgcatttatacccatggaatttctgaactgtatttcaattagtaggcatgcaatcagggagaaagtaaggcaggaaaaataggtgaggttgcagctaacatttgaatcagagtaaaatactgtagccggaaactgtggagaaattacttttgtggtcattttcagcagttgggtagcaaaatgaatggctaagattgtctgcaattgctattgcgcagtcaaaaactcacaatagcaattgcactgatctgaattcaatggattgagggatcaaagagacaactgtaatcccccatgttaaacttttgtcagcaattactatgaaatgaaccttttattttgcatggagctactataaatgaacttagattagtagaaatataaaagatatattgcagaatatatctttatacttgcctcttgattaaactctcgcatgcttggcagaggtttgcggctgtctctgttattgggaatctttacagcaacagtcttctcaccaattttgcactgaagaacagacccataactaccaattccaagaaaaattgcatctcggtcattgactacacgatgaatctgtgaaggcctgtactcggtgaacctaatcatctcataagacctggaagcttgctcctccatccaccagcgatgtttggtataaattgatactatggtttccgttctcctgagttcttccctgagtttctggttctccttgatggcattgttcgccctgaatctcaccaattatgaacagagatagaatgatcaggcaaaagaaacaatagtatattcaggctgactaacagacctccaagatcgccacaccttatggcttgttgccgatgttgggaacggcctcttccaagaaccatggctcaccaaggttcaaactgccgatcttcgacgatttcggctggatgaagctactgcttattggctgctgtgagtacactatggctgaatcttccaaggcttgcagctggtgaagattataaaggccaactgggggcaaggtgtcatttttcttctctttcgccactagttctattttctctgttccttttgttttggcagcagcctaagactctacatcacattatttattcaggttggtccgttagtgggatggcttttcagtgccaacatctcaaagcacctgggattttcaatgttttttggtgtcattccagaaaagattaccagacaatggtggatcagtcgatcactgagtttgtaaccgatcttttacatccatcactttcagacaattgtaaaggctaactactactgtactgggtgagttgctacgattaatcatgatcttttaagtaaacaaatgacaccttttaagtagtttatctcacgtgctatccttagtcaagtctatccttctagaaaaaatggtatggttttagtggttaaggtaatgatgacaaatccaatgggtcattttgacaaaagattgtttggattaacgaaatggtgggagtatgttttagtggctccacatgcaatgcatagtgttgaatgctcatcaatggtcatggatgacgcacatgatgctcatacacacataaaaagaaaacttgcagccaacatatctatgcaaatgtaaggcagcagacaatgcttttcacaagttagtggaaggaggaaccactgctttttatagctagctagctaagcagcaaaatagttggaagaaaggagagaagaaaggttaaaaaaaaaacaagaggaagaaattattttgcctttattcgttaggttgaggtaagaataagatcatactatcttggaaggaattaaagggtagcctatgtgtgcaccaatcgaacactttgcactgttagctagcaaaaaggcatttgtcatcatcggtaaatcaaatgagaaaaatactgcaaaggagatgatggtgatgcatctcctctgacattatgtcaagtggcatggtcactgacataatgacatgcgggtttcaataaccacgggctcccacgtaagtgatcatgtcagaaggtagttcacgttaaaagggtcttcttatgctcccaatgtttgctgttgatctgtttcgtttttagactatgtattcattatgaatttttaggcagaatggaggatatctagaatttgttcaccttcagtcccatgctgcacaagctgcggctagttcaggatcccaataaggcagcacaaatctgaaaaccatgtacccaacattataaaatacagtttcaactgaattgttctgacagagaaagggagaaacaaaaatcaattccactgtgtagggtacattagtggtcaaattattaaagttactttttccaaggagagggtaagtggagtatcatgcatgggtgcaattgtatatagatcatgacctacttttttgttactactagttatactgatcagagccactaatcatgtggttagactggtagtaccctgcacgttgctatgggagatgaaaagaattgatgtgtttgatttaggagaatattataccaatattcacttttaaatgcttgtaaagtctgttctgcaagtatatgccaagtagccaatcctgtaaagaacattctaatggaccaaaaaatgcatctatcatgctgattacaggaggaggcgtcgccgtggtggtggcagagggagaatggagaagggattccgatccagttccgggggtcattctcgctggagatgccgttgctctggtctgccctggagggtttcctcccagaagcggcttctccggccaccttccgtcgggcagcctggctcgctctggtttggcggatggagcagaggcgcagtgtgcactccgccgtgtcgcgagtggccggcgcagattccttctgggccggcgagccatccaggtgcggctcctgatctactgaaacaatgtacctactgagtactgattactgtactgccatggtatctccgcatattggagagaaaagttttggatgtgatctcaaaatgatgctggctagtattatgattcatagtttgatttttatctgcgcttatctgcaatttagtgcagcctgtaggatagttgggtttgtagtttgtctctctttccagaaatgcttgcagaatccatacacagtttgggaaccacaagcatgtggcaataaggcatttgacacccaaatgatttgtgcaaccaagaatgtggcaaccatagacatccaaacaaaattcttgaacgaaaacctgaggagaattgtgaaacattcatggctgcagtattactgtcgacagaacataaacgctgtcgaaagataaactgaacacaaaaactctctttttttttccttgaacataaatactctgcaaacaaaattgaacataagcacaatgtacaaagaaagttatatatttgtaaagtacgttgctgcacgcattcgggagacggaagatatcacactgcatgagttgaataatcttctagttttttcttgcttttgcagacaaggctttcacagtttcactcaagtactcaaccttgactatgagaggcactgctcttcatcggcttgatgtgtgttcacacatcagctcatcagctgcgaggtccggacactgtttcccttccggatcactgcatctcaatcccaggacatatctccagcgtcttttaacaggtatttctgatgttctacctgatcctgttgtgttaccagactcaggctcctattggtgagcttcatctgcaatctgcacgccagcagcggactgggccttgttactagactcagactcctcttcttgagcctgatctgcgatctccacgtcagcactgaagggagtgtggacgttgttgccaggctcagactcctcttcttgagcttcatctataatctccacaccagcagcagaagtttggacattgctgccaggctcagactccccttcttgagcttcatctgtaatctccatgtcagcagcagactgagcgtggatgtcgttgccaggctcaggctcgtcttctcgtgcttcatctgcaatctccacatctgcttcagcagcttgctgcagcacctgctccgctggttgattctgcacgcctgcttcacgagcttcaattccgttttgggcatcttccaccatcgcatcatcttcgacattgtggccaccctgaggttcttctgctgcaggctgaggctgaggctggacgttggcatctccaggcgcatcgtcctgatctcgccacaggctgctcttctcgatgccgcagtaccagagcaatccccagatgaaggtgatgagctcccctccgtactcgaggcaaatcttgtgtgcctcagcgttccagctgggcgcaatgtgcacgagcaaatcagcccatacacccgccaggatttgccaccgctgctgatcgtctggaattgtttcaagcaattgccttcccagtaccgcgcctttctctacgatggtcccgttcagttttttcagttcagcagcttcgggtgagaacaacccattgagcttgtcatactttgtcagcaaggagtcgcggtcattcataatatcagaagcgccaagctgtcaggcaacaggtcaggctgaaaaaccaccaagtgcgcgcagtatcgtgacaagctgtttgcaacaatgtagctagtccggagttgatcatcaccgagaatattttcagcaacgaggtacggctgaggagtgcagcagcagccgcagagaaaaattttcaggtacgtgaaggcggagcgcaggagccctggtttgctcaggtcaatgcccctgtctcgggcgagcttgatctcgcacatggaggtcgcgatgtgccaaaccagaatgacctgggagcacgtgtacaggtcaagcaacgcccatcggaaatcctcaagcaatctcgcggcgctcaacgatgggacgtctcggggaagctcgcggccgcccaagccagcgagatccattgagcgcaatgcctgaagaattgcaggttttacacattctgggatcttgatggcggtgccaggcttttgcccttttaccctctctttgatgacgcctagagtagcacggtacatcaggttccagagcgacgggctgtaatcaaatgactgcaagaagtcgtactggtcgatgtatccatgccaagggtcagaaaagatcttacgacttaaaaaggaacttaacgttagaaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0616900, RefSeq:Os11g0616900