Os11g0623800

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0623800| Description = Ras GTPase family protein| Version = NM_001074837.2 GI:297612217 GeneID:4350954| Length = 3165 bp| Definition = Ory...")
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Gene Name

Os11g0623800

Description

Ras GTPase family protein

Version

NM_001074837.2 GI:297612217 GeneID:4350954

Length

3165 bp

Definition

Oryza sativa Japonica Group Os11g0623800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:26229819..26232983

Sequence Coding Region

26229819..26232983

Expression

GEO Profiles:Os11g0623800

Genome Context

<gbrowseImage1> name=NC_008404:26229819..26232983 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:26229819..26232983 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagccatattgggttctttagttggatcatgtgctaagaagttgcaagagatcattacagatgaggcaattctaattctaggtgtgagaaaagagcttgaagaactacagaggagagcagacatcataaagtgttctcttaatgatgctgaggcaaggaggatggaagacacaacagttgaaatgtggcttggacagctaagagatgttatgtatgatgttgatgataccattgatttggccagatttaaaggaagcatgctgctatctgatcatccttcagcatcgtcaagctcaaccaaatcgacttcttgtggaggcctttcacttttgtcttgcttttctaatactggtacacgccatgagcttgctgttaagattaaaagccttaacaaaaagataaataacattgtaaatgacaaagtattcttaggacttgagagtacaccatccactggaaaagattcagtaacaccacaggaaagaagttccaaactagtggaaccaaaccttgtgggaagggacgtggtacatgcttgcagaaaattagtggatctggtcattaaaaataaggaaaagacggccgatattgaaaataaggaaaagaaggctgatattgaacataagaaaaaggaaccctacaagcttgctattgttggaactggcggaattggtaagaccacacttgctcagaaaatatacaatgataagaaagtggaagggaacttcgacaaacgtatatgggtttgtgtttccaaagagtaccttggaacgtctctattgagagaagttcttcggggtatgggtgtgcaatatggagcagatgaatcacttggtgagctgcaagtcaagcttatctcagccgttagtgagaagagttttctcctagtgctagatgatgtgtggcaatctgacgtgtggactaatttactacggattccactgcatgctgcatcaacaggagtaattctagtaactactcgacttgatattgtcgctcgggaaattggggcagatcacactcatcaagttgatttgatgtcagatgatgtaggatgggagctactttggaagagtatgaacgtcattgaagaaaaacaagtgcaaaatctgcgtgatatagggatggagattgttcgcaagtgttatggccttccccttgcaataaaggttatttcccgagttctaatcagcaaagataaatcagagaaggaatggaaaaagatattgaacaaaaattcttggaaaacgaacaattttcctagtgaaataataggtgctttgtatctgagttacgatgagttgccacaacatttgaagcaatgttttctttattgtgctatataccccgagaattcaacaattaaccgtgatgatattaccagaatgtggatagctgaaggctttatagatgagcaggaaagctctacagatgaacagaaacaccaactactagaagatacagcagtagaatattactatgagctgatccaccggaacctccttcaaccagatggttcacattttgaccatattagatgcaagattcatgatctcttaaggcagcttgcttttcatttatcaagacaagagtgttttgtgggagatccagaaacacaaggtggtaacaaaatgagtgtagtgcgacgtatttcagttgtgacaggaaaggacatggtggtattacctaggatggataaggaggaatataaagtaaggacttacagaacttcatatcacaagtcactgaaagttgatagttcacttttcaggagacttaaatatctccgtgttttggatttgactaaatcatatgtacaaagcatcccagatagcattggagatttgattcatttgcgtttacttgatcttgatagcactgacatatcttgtcttccagagtcccttggttctcttaaaaaccttcaaatactgaatttgcaatggtgcgttgctttgcacagacttcctttggcgatcactaagctgtgcagtcttagacggcttggtattgatggtacaccaataaatgaggtcccaatggggataggaggattgaagttcctcaatgatttagaaggatttcctattggtggtggtggtaatgataatgctaaaatacaagatggatggaacttggaagagttgcgtcctcttccgcatttgaggaagcttcagatgatcaaattggaaaaggcagcttcaggctgtaaagatacattgctaacagacaaagggtatctcaaagtcttaagactatggtgcactgagcgtacaaatgaaccatattcagaaaaagatgttagtgacatagagaatatgtttgagaagttaatccctccatgcactctagaagatctagttctcacaagatactttggtcgaaagtatccaacatggcttggtactacctatttgtgctcactagaatatctgactctaagatggtgcaaatcatgtgtatgtcttccaacaattgggcagttgcacaacttgaaatatctaaggattgagggagcaatagcagttaccaagattggaccagaatttcttggctgcaagctcagaaccacagaggaggcagtagcattctctaggcttgaattgcttacctttacagatatgcccaattgggaggagtggtcctttgttgaagacgatgatgaagcagcagcaacagcagagcctgtagcaaatgaaggggaggcgaatgatgcttctgcaaagccgaaaggggaagccccagttggaaggttgcagctgctgccatgtctaaagaagttacaccttcgtaactgcccaaaactgagggctttcccgcgacagcttgggaaggtggccaccagcttgaaggtgctcacaataggtgaagcaagatgcttgaaagttgtggaggacttcccattcctttctgataacctttcgatcattggatgtaaaggtctgaagaggatctctaatcttccacagctgagggatctgcgtgtagcccgttgcccaaacttgaggtgtgtcaaggagtttggctgtctgcagcagctgtggctgggcgtgggtatgcaagacgtgtcttcagtatgggtggccgggctccaaggacaacaccggcaagatcatggagatgatctggatgtctacacatggcaacttcgtgtaggctga</cdnaseq>

Protein Sequence

<aaseq>MAAILGSLVGSCAKKLQEIITDEAILILGVRKELEELQRRADII KCSLNDAEARRMEDTTVEMWLGQLRDVMYDVDDTIDLARFKGSMLLSDHPSASSSSTK STSCGGLSLLSCFSNTGTRHELAVKIKSLNKKINNIVNDKVFLGLESTPSTGKDSVTP QERSSKLVEPNLVGRDVVHACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLA IVGTGGIGKTTLAQKIYNDKKVEGNFDKRIWVCVSKEYLGTSLLREVLRGMGVQYGAD ESLGELQVKLISAVSEKSFLLVLDDVWQSDVWTNLLRIPLHAASTGVILVTTRLDIVA REIGADHTHQVDLMSDDVGWELLWKSMNVIEEKQVQNLRDIGMEIVRKCYGLPLAIKV ISRVLISKDKSEKEWKKILNKNSWKTNNFPSEIIGALYLSYDELPQHLKQCFLYCAIY PENSTINRDDITRMWIAEGFIDEQESSTDEQKHQLLEDTAVEYYYELIHRNLLQPDGS HFDHIRCKIHDLLRQLAFHLSRQECFVGDPETQGGNKMSVVRRISVVTGKDMVVLPRM DKEEYKVRTYRTSYHKSLKVDSSLFRRLKYLRVLDLTKSYVQSIPDSIGDLIHLRLLD LDSTDISCLPESLGSLKNLQILNLQWCVALHRLPLAITKLCSLRRLGIDGTPINEVPM GIGGLKFLNDLEGFPIGGGGNDNAKIQDGWNLEELRPLPHLRKLQMIKLEKAASGCKD TLLTDKGYLKVLRLWCTERTNEPYSEKDVSDIENMFEKLIPPCTLEDLVLTRYFGRKY PTWLGTTYLCSLEYLTLRWCKSCVCLPTIGQLHNLKYLRIEGAIAVTKIGPEFLGCKL RTTEEAVAFSRLELLTFTDMPNWEEWSFVEDDDEAAATAEPVANEGEANDASAKPKGE APVGRLQLLPCLKKLHLRNCPKLRAFPRQLGKVATSLKVLTIGEARCLKVVEDFPFLS DNLSIIGCKGLKRISNLPQLRDLRVARCPNLRCVKEFGCLQQLWLGVGMQDVSSVWVA GLQGQHRQDHGDDLDVYTWQLRVG</aaseq>

Gene Sequence

<dnaseqindica>1..3165#atggcagccatattgggttctttagttggatcatgtgctaagaagttgcaagagatcattacagatgaggcaattctaattctaggtgtgagaaaagagcttgaagaactacagaggagagcagacatcataaagtgttctcttaatgatgctgaggcaaggaggatggaagacacaacagttgaaatgtggcttggacagctaagagatgttatgtatgatgttgatgataccattgatttggccagatttaaaggaagcatgctgctatctgatcatccttcagcatcgtcaagctcaaccaaatcgacttcttgtggaggcctttcacttttgtcttgcttttctaatactggtacacgccatgagcttgctgttaagattaaaagccttaacaaaaagataaataacattgtaaatgacaaagtattcttaggacttgagagtacaccatccactggaaaagattcagtaacaccacaggaaagaagttccaaactagtggaaccaaaccttgtgggaagggacgtggtacatgcttgcagaaaattagtggatctggtcattaaaaataaggaaaagacggccgatattgaaaataaggaaaagaaggctgatattgaacataagaaaaaggaaccctacaagcttgctattgttggaactggcggaattggtaagaccacacttgctcagaaaatatacaatgataagaaagtggaagggaacttcgacaaacgtatatgggtttgtgtttccaaagagtaccttggaacgtctctattgagagaagttcttcggggtatgggtgtgcaatatggagcagatgaatcacttggtgagctgcaagtcaagcttatctcagccgttagtgagaagagttttctcctagtgctagatgatgtgtggcaatctgacgtgtggactaatttactacggattccactgcatgctgcatcaacaggagtaattctagtaactactcgacttgatattgtcgctcgggaaattggggcagatcacactcatcaagttgatttgatgtcagatgatgtaggatgggagctactttggaagagtatgaacgtcattgaagaaaaacaagtgcaaaatctgcgtgatatagggatggagattgttcgcaagtgttatggccttccccttgcaataaaggttatttcccgagttctaatcagcaaagataaatcagagaaggaatggaaaaagatattgaacaaaaattcttggaaaacgaacaattttcctagtgaaataataggtgctttgtatctgagttacgatgagttgccacaacatttgaagcaatgttttctttattgtgctatataccccgagaattcaacaattaaccgtgatgatattaccagaatgtggatagctgaaggctttatagatgagcaggaaagctctacagatgaacagaaacaccaactactagaagatacagcagtagaatattactatgagctgatccaccggaacctccttcaaccagatggttcacattttgaccatattagatgcaagattcatgatctcttaaggcagcttgcttttcatttatcaagacaagagtgttttgtgggagatccagaaacacaaggtggtaacaaaatgagtgtagtgcgacgtatttcagttgtgacaggaaaggacatggtggtattacctaggatggataaggaggaatataaagtaaggacttacagaacttcatatcacaagtcactgaaagttgatagttcacttttcaggagacttaaatatctccgtgttttggatttgactaaatcatatgtacaaagcatcccagatagcattggagatttgattcatttgcgtttacttgatcttgatagcactgacatatcttgtcttccagagtcccttggttctcttaaaaaccttcaaatactgaatttgcaatggtgcgttgctttgcacagacttcctttggcgatcactaagctgtgcagtcttagacggcttggtattgatggtacaccaataaatgaggtcccaatggggataggaggattgaagttcctcaatgatttagaaggatttcctattggtggtggtggtaatgataatgctaaaatacaagatggatggaacttggaagagttgcgtcctcttccgcatttgaggaagcttcagatgatcaaattggaaaaggcagcttcaggctgtaaagatacattgctaacagacaaagggtatctcaaagtcttaagactatggtgcactgagcgtacaaatgaaccatattcagaaaaagatgttagtgacatagagaatatgtttgagaagttaatccctccatgcactctagaagatctagttctcacaagatactttggtcgaaagtatccaacatggcttggtactacctatttgtgctcactagaatatctgactctaagatggtgcaaatcatgtgtatgtcttccaacaattgggcagttgcacaacttgaaatatctaaggattgagggagcaatagcagttaccaagattggaccagaatttcttggctgcaagctcagaaccacagaggaggcagtagcattctctaggcttgaattgcttacctttacagatatgcccaattgggaggagtggtcctttgttgaagacgatgatgaagcagcagcaacagcagagcctgtagcaaatgaaggggaggcgaatgatgcttctgcaaagccgaaaggggaagccccagttggaaggttgcagctgctgccatgtctaaagaagttacaccttcgtaactgcccaaaactgagggctttcccgcgacagcttgggaaggtggccaccagcttgaaggtgctcacaataggtgaagcaagatgcttgaaagttgtggaggacttcccattcctttctgataacctttcgatcattggatgtaaaggtctgaagaggatctctaatcttccacagctgagggatctgcgtgtagcccgttgcccaaacttgaggtgtgtcaaggagtttggctgtctgcagcagctgtggctgggcgtgggtatgcaagacgtgtcttcagtatgggtggccgggctccaaggacaacaccggcaagatcatggagatgatctggatgtctacacatggcaacttcgtgtaggctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0623800, RefSeq:Os11g0623800