Os11g0638801

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0638801| Description = Protein of unknown function DUF594 family protein| Version = NM_001189744.1 GI:297728618 GeneID:9271272| Length = 60...")
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Gene Name

Os11g0638801

Description

Protein of unknown function DUF594 family protein

Version

NM_001189744.1 GI:297728618 GeneID:9271272

Length

6014 bp

Definition

Oryza sativa Japonica Group Os11g0638801, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27078808..27084821

Sequence Coding Region

27078808..27078971,27079303..27079369,27079478..27079585,27080050..27082232,27084761..27084821

Expression

GEO Profiles:Os11g0638801

Genome Context

<gbrowseImage1> name=NC_008404:27078808..27084821 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27078808..27084821 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgaactgacgacgggcgtctttggatggacggagtgttacggaacgaagaaaattcatgttaaggtggagaaatcgatggcaggagcagaggctgtgagcgctgcatggaaagaatgggctctccaagcactggtgcttctcagcctcatggtccaagtcacactcctcatcttggcagaattccgccggtacattgactctggcgtgctaagggcctttatatggtccgcatacatgctggccgacgggacagcgatctacgtgcttggccacctctctgttaccagcaggtcaccagagcatgagctgttggcactctgggcaccgttcctgctgctgcaccttggtgggcaggacaaaatcactgcctacgccatcgaggacaaccggctgtggctgcgccacctgcagacgcttgttgtgcaggtggccgcagctgcctatgtcatctatgggtcctccatagtcattgttggcgacagccggaccttgcttctcctgtcagccaccatcctcatgttaatggtaggtgttgccaagtatggggagcgtgtctgggcgctcagatgtgccggtagtagcccaactggaaagtacgagagtgatatagcgagaagaagattttctcaaatggtgcctgagtcattcatacgtcgcttggatccagcagaaaccttgctattaaatgctcacctattgttggattttgccaaggataggtttaaggggccattacctcgtctgtttttgtgtggccccatgaatgaaggatcacgattgcaaggggaggacgagttgtacaaggtggctgagatgcaactctccctcctccacgacgtcttctacaccaagtctgagattacacacacttggtatggcctttgcatccgagtgctttcgtctctggccaccaccgttgcattctttctgtttaatatactactagtctggggaaatcatcatcagcataagctgaatggttacagcagagcagatgtcattgttacatatgtcctctttgttggagccgtcatcctggagactatgtcacttttgagggccatgttctcgagctggacatgtgcactcctggtaaagaagggatcggaaggaagtaatgtgtgtaattttcttgctcacatacccgcctgtctccgccggctggtccgtgcggcatattggaggaggaggcgcagctggtcacgctccatggggcagctcaacctgattcagttgtgcgtgcacagcagggccagccgatgcagcaagattgcgaggtggatgggagtcgaggactggtggaacaggttggcttactcgggcctgcccatccccatctcggcgtgtaccaagcagctgctgctggagaccatgaaggcgaagcaatggggtcaggaggaatttgaaagcagaggattgtacagggacccagcctgggttgctgagtccaagatggagcagaggatcctcatctggcacatcgccactgagatctacctgtgctggtacaaggatcaggagaagaagcaagcagaggccaccagtggttcaggttcagctgctgaagaggagcaagcagcggccaccggtggttcaggttcagctgctgaagaagggcaagcagaggctgccagtggttcaagttcaactgctgaagaggatcaagcaaaggccgtcggtggttcagtttcagctgctgaaggggagcaaggagaggttgccaatggctcaagttcagctgctggagaggagcaaccagaggtagtcgatggttcaggttcagctgctgaccttatggaaacggctcaggcgctgtccaatcacatgcttttcctgcttgcatcacgtccccacatgctgcctcccgatgccagccgcaatgattatcttgtgctgtgctatgctatcactcgtcacctgaggtacagcacagctgaggatgtgctccacttgctacaacttaacgcagatgcattgaggacgaatagctctaaaccgaagtttaaattaacttgtacaaatactaatagacttggggacaagatgttgaggggaggatgctcgcttggtgcattcctcatcgaccggcaagactcgcctgctgatggcactggcacgctagagatgatctgccaggtgtgggcacagatgctgtgctgctgtggggaacaatgcagcacagattctcatgtcaagcagctcagcagtggcggtgagcttgttaccgtcactgcccttggtatgtttgtgcttacaaatgttgcagttggtggtgaattaaacaagaaggctgtgatgaatgttcttgtacctcatcgagcagatcgtgtcaaaccatcttttgtgacttcaaattgctggggtaatttcacaagtaaaaggcctgataaacgacctctgcttggattgcaagctatgagtacctcaagcatggtgattgaacgcagcttggacaatgcagaggatggtttcgtgagagcagccaccattgaacttcggccattgaagcttgcagacagcttgaggaaagagaagatggagattgcaatcacatctgtggacgatgataatcagtaa</cdnaseq>

Protein Sequence

<aaseq>MDELTTGVFGWTECYGTKKIHVKVEKSMAGAEAVSAAWKEWALQ ALVLLSLMVQVTLLILAEFRRYIDSGVLRAFIWSAYMLADGTAIYVLGHLSVTSRSPE HELLALWAPFLLLHLGGQDKITAYAIEDNRLWLRHLQTLVVQVAAAAYVIYGSSIVIV GDSRTLLLLSATILMLMVGVAKYGERVWALRCAGSSPTGKYESDIARRRFSQMVPESF IRRLDPAETLLLNAHLLLDFAKDRFKGPLPRLFLCGPMNEGSRLQGEDELYKVAEMQL SLLHDVFYTKSEITHTWYGLCIRVLSSLATTVAFFLFNILLVWGNHHQHKLNGYSRAD VIVTYVLFVGAVILETMSLLRAMFSSWTCALLVKKGSEGSNVCNFLAHIPACLRRLVR AAYWRRRRSWSRSMGQLNLIQLCVHSRASRCSKIARWMGVEDWWNRLAYSGLPIPISA CTKQLLLETMKAKQWGQEEFESRGLYRDPAWVAESKMEQRILIWHIATEIYLCWYKDQ EKKQAEATSGSGSAAEEEQAAATGGSGSAAEEGQAEAASGSSSTAEEDQAKAVGGSVS AAEGEQGEVANGSSSAAGEEQPEVVDGSGSAADLMETAQALSNHMLFLLASRPHMLPP DASRNDYLVLCYAITRHLRYSTAEDVLHLLQLNADALRTNSSKPKFKLTCTNTNRLGD KMLRGGCSLGAFLIDRQDSPADGTGTLEMICQVWAQMLCCCGEQCSTDSHVKQLSSGG ELVTVTALGMFVLTNVAVGGELNKKAVMNVLVPHRADRVKPSFVTSNCWGNFTSKRPD KRPLLGLQAMSTSSMVIERSLDNAEDGFVRAATIELRPLKLADSLRKEKMEIAITSVD DDNQ</aaseq>

Gene Sequence

<dnaseqindica>5851..6014#5453..5519#5237..5344#2590..4772#1..61#atggatgaactgacgacgggcgtctttggatggacggagtgttacggaacgaagaaaattcgtactctagtggtgtattctgaaagtagtatgaattaggtgacaaatcctataagcagtgcgtattgggtgttatattctgaaaattctccccacgaccgcccaaggtaatcgattatccctttgcggccctgacttggttcgtggatggatggtataatggatagatgggagaaggattggttgcatttgttgctgtagtcttgtagacgaatcgatggttggtaaaaaaaaaaaaagggtgtctgtgactgtgaaccttgtgttaaatggatgatttcttatttaacatgtttctaatatgttcattgactggaatgtgaagcttgtgtcactgtcaaatggatggataataagtcataagatcaccaacctcggtgcataatttcgtttctgatatgaccgcaatttgcttgtgtcactgtcaaatggatggataattaatcataagctcaacaactgtgggaaggggtggtacaatccgatattcatactaccaaccaaacaaaaaagactagatcatcccatcggtattcattctaccaacgaaacaaagctcgatagcccgattcatctgaccaaagaagtaagttgatggcctctcttatatgattcttgtgtttttcatgtgctctattcaaacagctatttgttgtgcagttcttctatgttttcaacgctccgtaggagttggagcactctaatccttttctattcatatgccttgagaatcatgggttccagcgaggtcttaaatatctgtagattgatgattcaattaacatcacagtctatgggatcttaatgcttatggctacccatggcaacttcaaaacatgtactggaggtctgttttttttttcctggagttttgaacctagcatatgccgcaggaccgcgggagatgtcaggaccaagtttcctggaatctatgcaactattttctttgttgtttggtgagaaaaaaacttgtgggcccatgtgtaagtggagcaatggaggttagggagaattagatgggaaaataatgagattatacgagttcagttctaggtcctcttttagaggggttgtgatgtgatgttaaccatatattattgtagatgaaaaggaaaatgaggcatcgttataaagtgatacagcgttagtgatttgactcttatactccactttctttttggggaaaaaaaggagaatagtttacttttatcctttacttgctgctgggcaggtatcagatgaatgacatcttttcttgattccttaaccctctgggaggcattgcatcagattttgcatgcatgttgatatatttgtgtgtggcacttaactatgcatgaattgcattcatcccctcaaacatatcaaactggctaatccctgaccatatataacttgtctgtcaaactgaagattatcatcgatcacttctccacccattcagttatcgtgtgtaagtttctctattcacatagctagcttctgtgtaatatgtgtttactgcaggaggtatttcatccaaattacccttgttagaaaaatgcatgtccgataaattttaattgtggtgcatagataataatcatgctgttaaaagacggagatttccgcatgcgcttcccaactagatcaacatacaacttcacataagtacatgcaacacaagattcatttatcacatcagtagccaaaaaaactgggagatttttgtagctctcacttaatacgacttcattgctatcaagtttttctgcttggccacattgtttaaggctgttcctgaatttgtggcacctgatgcattgctaattcttttgtaaatcagattgacattgccttggctctaatatcacttattatgtttatatatcctgaatacagtatgtatttggcttgccatatatgccatgagccagctcagggcctcaggtgatggtaagaatgaagcaaatgaaaactgaaataatagcaatgaaacaactgacgtataagagaaaagtgtttgggaagtcaatcacaaattctttaagcacacaacccctaaagagtctgatgcattctcagtggcttctttggatgtacacaatagccttaattacaatgattctaatagaagttctcatggcaatgtgaatgcttaggctgaaatagggtatgagtctgcttttacaacaattataatgatagtagttttttttttttgtggaaaagggagctttattactctcattattacagctagctaatacaagtacaaccacacaaaagtttactcacaacctctctgcataataaagatgtacacaaccacaattaaagaaacaacaacccggaacatgtgatacggaacaagggaaagtccaacagaatggaagcacaccccctcagctgtcattattctgcttgggcttggatgctgagtttagaacttgagattgccatcagaattaggtttgatagtgttgataaactaaaaagaaatattatgtagttttgacttatgtcaatcgattggtgtatacatttcagatgttaaggtggagaaatcgatggcaggagcagaggctgtgagcgctgcatggaaagaatgggctctccaagcactggtgcttctcagcctcatggtccaagtcacactcctcatcttggcagaattccgccggtacattgactctggcgtgctaagggcctttatatggtccgcatacatgctggccgacgggacagcgatctacgtgcttggccacctctctgttaccagcaggtcaccagagcatgagctgttggcactctgggcaccgttcctgctgctgcaccttggtgggcaggacaaaatcactgcctacgccatcgaggacaaccggctgtggctgcgccacctgcagacgcttgttgtgcaggtggccgcagctgcctatgtcatctatgggtcctccatagtcattgttggcgacagccggaccttgcttctcctgtcagccaccatcctcatgttaatggtaggtgttgccaagtatggggagcgtgtctgggcgctcagatgtgccggtagtagcccaactggaaagtacgagagtgatatagcgagaagaagattttctcaaatggtgcctgagtcattcatacgtcgcttggatccagcagaaaccttgctattaaatgctcacctattgttggattttgccaaggataggtttaaggggccattacctcgtctgtttttgtgtggccccatgaatgaaggatcacgattgcaaggggaggacgagttgtacaaggtggctgagatgcaactctccctcctccacgacgtcttctacaccaagtctgagattacacacacttggtatggcctttgcatccgagtgctttcgtctctggccaccaccgttgcattctttctgtttaatatactactagtctggggaaatcatcatcagcataagctgaatggttacagcagagcagatgtcattgttacatatgtcctctttgttggagccgtcatcctggagactatgtcacttttgagggccatgttctcgagctggacatgtgcactcctggtaaagaagggatcggaaggaagtaatgtgtgtaattttcttgctcacatacccgcctgtctccgccggctggtccgtgcggcatattggaggaggaggcgcagctggtcacgctccatggggcagctcaacctgattcagttgtgcgtgcacagcagggccagccgatgcagcaagattgcgaggtggatgggagtcgaggactggtggaacaggttggcttactcgggcctgcccatccccatctcggcgtgtaccaagcagctgctgctggagaccatgaaggcgaagcaatggggtcaggaggaatttgaaagcagaggattgtacagggacccagcctgggttgctgagtccaagatggagcagaggatcctcatctggcacatcgccactgagatctacctgtgctggtacaaggatcaggagaagaagcaagcagaggccaccagtggttcaggttcagctgctgaagaggagcaagcagcggccaccggtggttcaggttcagctgctgaagaagggcaagcagaggctgccagtggttcaagttcaactgctgaagaggatcaagcaaaggccgtcggtggttcagtttcagctgctgaaggggagcaaggagaggttgccaatggctcaagttcagctgctggagaggagcaaccagaggtagtcgatggttcaggttcagctgctgaccttatggaaacggctcaggcgctgtccaatcacatgcttttcctgcttgcatcacgtccccacatgctgcctcccgatgccagccgcaatgattatcttgtgctgtgctatgctatcactcgtcacctgaggtacagcacagctgaggatgtgctccacttgctacaacttaacgcagatgcattgaggacgaatagctctaaaccgaagtttaaattaacttgtacaaatactaatagacttggggacaagatgttgaggggaggatgctcgcttggtgcattcctcatcgaccggcaagactcgcctgctgatggcactggcacgctagagatgatctgccaggtgtgggcacagatgctgtgctgctgtggggaacaatgcagcacagattctcatgtcaagcagctcagcagtggcggtgagcttgttaccgtcactgcccttgtcgcaaaatacatgaggtcaaggatgttgtcttggcactttcagatagattcacatgagcgtttgagcgaatggtgaaatagtagggtgaagaggtgcagcagcagcagcaaaattttgttgaaggatatgtggacaccattaattatgttattggtgaagatggcatgattttaaatgctatttcaagacagctgagtaatgcacatatgccttaggagtgtgcatacaggtcagtattccttaaactacagtatactgacttaccttatctatacttttttttttcatatgtgtttttaaactatggagggcaaaaagggaaatatttccaataaaacagtgtatttttttttttgttttcatacggatgcatgcttcttaactgtgatactatttattatctgaaaaaaagaatgcaaaaatcatagttagtcattggcctttctgtttcctctcttcagggtatgtttgtgcttacaaatgttgcagttggtggtgaattaaacaagaaggctgtgatgaatgttcttgtacctcatcgagcagatcgtgtcaaaccatcttttgtggttaactttctgcagagcaaggattaacaattgtgagttgcaaccttatgtgtgctctgaacttgattggtccaaaatttgaggccttttctgttcgggagttgtcagacttcaaattgctggggtaatttcacaagtaaaaggcctgataaacgacctctgcttggattgcaaggtactaccttttcaatttaagtacatacttgtcaatcagtgtcattagtcatgatcacctcattccatgcatactgcttctgtcacattagcatgcatgagtactatgttgctcagttcgtagctttatctagcctggtctgatgttttccaataaaatggatcctagttgtgctagagacagaatgtagcttactttttcctattaacaaacacttgatattagcaaacataccatataaagttactcgtatttctttagcacagaagcactcggtggcctcaaatctatttagctatgagtttgtgcaaatgtctgtcccttgttttagctatgagtacctcaagcatggtgattgaacgcagcttggacaatgcagaggatggtttcgtgagagcagccaccattgaacttcggccattgaagcttgcagacagcttgaggaaagagaagatggagattgcaatcacatctgtggacgatgataatcagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0638801, RefSeq:Os11g0638801