Os11g0646300

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0646300| Description = NB-ARC domain containing protein| Version = NM_001074902.1 GI:115486452 GeneID:4351024| Length = 4775 bp| Definitio...")
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Gene Name

Os11g0646300

Description

NB-ARC domain containing protein

Version

NM_001074902.1 GI:115486452 GeneID:4351024

Length

4775 bp

Definition

Oryza sativa Japonica Group Os11g0646300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27537876..27542650

Sequence Coding Region

27537876..27541761,27542211..27542650

Expression

GEO Profiles:Os11g0646300

Genome Context

<gbrowseImage1> name=NC_008404:27537876..27542650 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27537876..27542650 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccagagcgcggtgagctcgctgctggggcagcttaccggcctcctcgttgacgaggcgaagctactcggcggcgtccggggcgacgtgcaattcatcaaggacgagatggagagcatgcaaggcttcctcctggatgccgccgatgccgccaacaacaacagcagcagccagcaggtcctggcatggcagcggcaggtccgggaggtcgcctacgactcccagaaatgcatcgaccactacgtgcagacggtgggcgccagccgcccgtcggccggcctcctcggctccgtccagtggctgccgcagctggtgatgacgttgccaagccgccagcgcaccgccaacaagatcaagaagctcaaggcccgcgcgcgcgaggtgggggagcggcggcagaggtacggcgtcaaagctccgactcggagcggcggcgtcaaggtcatcaccgcgccgatgctctcgccgcagcaggaggcggcggagcacgcgcggaggcgccgtgccatagctgacgccaccgactgggtgaacaccgacgcgcagcacgtgatggactggatagcggccggcggcaaaggacacaacgacgatgatggtggccgggaggagtacatacattggatcaaaggcttcctgcacatgccccacttcaccaccgagagcttcttgacggagctcatgagcaacaaggccgatgctaccgccttcttgctggagtacaccaaagagttgttcggagggccgctccactatttggaagggcatttgttgtggccacataaagatgatgggcatgataagaaggccacgacggcagcggcatcatccccttctcaagaccaccacgatgctgacaaaaagaagccagtagcagctgctgatccgtcagagagggccaaagaagcagctgttgatccgtctgggaaggcgaaggagcacaagcgttggatcacccaaggggagaagaaagcggcggacacgtcaacctcttcagaagtccatgattctgctgagaagaggatgcctttagcagatgttaatccgtcggagatggcggaagcatcatcagctgatgatggacataacaaggcaacggaaggccataccaaagagttgttcggagggccgctccactatttgaaagggcatttgttgtggccacataaagatgatgggcatgataagaaggccacgacggcagcggcatcatccccttctcaagaccaccacgatgctgacaaaaagaagccagtagcagctgctgatccgtcagagagggccaaagaggagaagaagcaccagatcatcagttgggtacatggagcacttacgagcgacggcatcaacatatttcacacgaaagatacccacggcccaaggctcctcgccattgttacatcaccggttcgtcgcgaggcccacgacctcgaagacgaagaaccacatgggctcaggcctgcaacagagatcgcacgtagggtgttcaataattattattcccgccaaggcggccgcttcgactttgccgtgtgggtcaacgccgaggaacactcacatagcaccgccaggcttcggagcatactccagcaggtggagaagcaggcgcaggtgcagcctcaggagcagcggcagcatccatcatcttcttctcgcgataaaaaagacggtggtgacgagacgacaagattgcaacaggagatcctaaagcacctgacagggaagaagttcttgatttttcttgctgaccaccaggacgaaacaccatggacacagatactacctgctctgccgactgatagcaccaatgaaagtgcagtcatattgagtcctctggtgcagcaagcataccagtacgttgggtggtacgtgctcagccttttcttcttgctaaagcactcccgctatagagtctacttctactctcatcttgttgcaacacggaacaaggccaaagagttgctgcgggttggcgccgatcaacacaaaggagaagatttgcatgacctcgtcaatcatatattggaacgttgtcgctgggattcattttccagcaagatgtttcttcatgctctttatgctaatcatcaaaggagcaagccagagctggagaacttgttgctttctctgaatgaattcagcacggtgagcaatgccagaaacatgatcaaattttgctacgatgacctgcacagttacaaggtttgcttccagtacctgtccattttccccttgggattcaagatcaggaggacaagcttggtcaggcgatgggctgcagaaggccttatcgtgggaagagacgggctagctgcaacggatgaagctgagcgctgcttcgatgccatgattgatcgaggccttctccttcctgccgacaacaccgacaacccttcaggcaaagtgaagatgtgcacggtcgatccacatgttttctccttcattgccaggttgcacaaagacgatggccgtgctccagctgctgatagcatcgacctgccgcccgccctggctcatcgcatctccattgccagaagaattcaactctccaacaagacacgacaacgagtcagcgagggtttgaagaagcagatggacggcggtggcgagccacaagactctgtcgcacaaggcatggtctgtggaattcaactttccaacaagacacgacgacgacaagccagtgaggggttgaagaagaagatggacagcaatggggagccactagtcccagagccaagatcgcaagactctgcagtggaagacgtggtaaagcttcttgacttgtttcctacaactgaatcaggatggatcaaagtgctagaccttgaaggctgccgtggactgaagaagaagcacctcaagaacatctgcaacagggtattccagctcaagtatctgagcttaaggaacacagacattgctgagctgcccaaggaaattaacaagctccaagacctggagacatttgacatgaggggaaccaacatagaatccttccctgcaaaatccattgttctcccaaagctggcgcgactgctttctggtgttgctcacaccgacgctccaactccaagtaaggatgataatcttacaagtagaggatcttctcatgaatcatttactgcaatccatattccccgtggaatcaagaacatgacaagcatgcagatactatcccatgtccaagtttctgaccatcacgacgaggctgcagcactggaagatttagcccggctgcagctgctatggaagcttggtgttgttatccatgccaagcaagcttaccttgtgctcaaagtggttgggatgctaaatgaatgcctgaggtctttgtcaatccgtctccaagatggtggagaggatcctgatctgaacaacacaccaccaatattctcacctccaagatctcttgcaagccttagcatcagtggcaggataggtggcctgcctacttggatccaaaatctggaacaactctctgacataactctgtgcgacacctccttgaaagactctgatataaagatcttgtgtgctagtatcaacctgcgcttcatcaggctcttgcgtgagtcgtacaaccagaacaagctcagttttgaaaagggattcagaaaccttgagattctcatcattgagggatcaggcaccatctctgatgtccattttgatccgagagtggcacctaagcttgagaagattgtctggagctccacctgcaagatggaaaatcttgggatcgacaaccttcaaggactgaaagagattgtgctcaaaggcgactgtgacctgaatcgcatcaggctatccgtcaaagcgaatccatgccatcctaaccttacacacactccaactctcaactctccaacaatccaacccggtcttaataaacttgccaaggttactttgagtagcacctcattgaaccaagacaatttgaaggttctcggtgagttgtctagcttatgctatttcaggctcagacacaatggatacacaggtgaaaaactcaccttcaagaaggatgaattcaaaaatctcaagtcttttcttgttgaggaccccagcatgatcagcatcgaatttcagaagggagcagctgcagagctcgagaagattgtattctcctccaccaacataaagtctcttcataggcttggaggccttccaaaattgaaagagcctgagttgaagagcaacaggttccttgtttcattctctgaagagggagaaactcataagaaatgttctctagcaagctcaccttcaagaagaatgaattccaacagctcaagtacctccttgttgagggactgttga</cdnaseq>

Protein Sequence

<aaseq>MDQSAVSSLLGQLTGLLVDEAKLLGGVRGDVQFIKDEMESMQGF LLDAADAANNNSSSQQVLAWQRQVREVAYDSQKCIDHYVQTVGASRPSAGLLGSVQWL PQLVMTLPSRQRTANKIKKLKARAREVGERRQRYGVKAPTRSGGVKVITAPMLSPQQE AAEHARRRRAIADATDWVNTDAQHVMDWIAAGGKGHNDDDGGREEYIHWIKGFLHMPH FTTESFLTELMSNKADATAFLLEYTKELFGGPLHYLEGHLLWPHKDDGHDKKATTAAA SSPSQDHHDADKKKPVAAADPSERAKEAAVDPSGKAKEHKRWITQGEKKAADTSTSSE VHDSAEKRMPLADVNPSEMAEASSADDGHNKATEGHTKELFGGPLHYLKGHLLWPHKD DGHDKKATTAAASSPSQDHHDADKKKPVAAADPSERAKEEKKHQIISWVHGALTSDGI NIFHTKDTHGPRLLAIVTSPVRREAHDLEDEEPHGLRPATEIARRVFNNYYSRQGGRF DFAVWVNAEEHSHSTARLRSILQQVEKQAQVQPQEQRQHPSSSSRDKKDGGDETTRLQ QEILKHLTGKKFLIFLADHQDETPWTQILPALPTDSTNESAVILSPLVQQAYQYVGWY VLSLFFLLKHSRYRVYFYSHLVATRNKAKELLRVGADQHKGEDLHDLVNHILERCRWD SFSSKMFLHALYANHQRSKPELENLLLSLNEFSTVSNARNMIKFCYDDLHSYKVCFQY LSIFPLGFKIRRTSLVRRWAAEGLIVGRDGLAATDEAERCFDAMIDRGLLLPADNTDN PSGKVKMCTVDPHVFSFIARLHKDDGRAPAADSIDLPPALAHRISIARRIQLSNKTRQ RVSEGLKKQMDGGGEPQDSVAQGMVCGIQLSNKTRRRQASEGLKKKMDSNGEPLVPEP RSQDSAVEDVVKLLDLFPTTESGWIKVLDLEGCRGLKKKHLKNICNRVFQLKYLSLRN TDIAELPKEINKLQDLETFDMRGTNIESFPAKSIVLPKLARLLSGVAHTDAPTPSKDD NLTSRGSSHESFTAIHIPRGIKNMTSMQILSHVQVSDHHDEAAALEDLARLQLLWKLG VVIHAKQAYLVLKVVGMLNECLRSLSIRLQDGGEDPDLNNTPPIFSPPRSLASLSISG RIGGLPTWIQNLEQLSDITLCDTSLKDSDIKILCASINLRFIRLLRESYNQNKLSFEK GFRNLEILIIEGSGTISDVHFDPRVAPKLEKIVWSSTCKMENLGIDNLQGLKEIVLKG DCDLNRIRLSVKANPCHPNLTHTPTLNSPTIQPGLNKLAKVTLSSTSLNQDNLKVLGE LSSLCYFRLRHNGYTGEKLTFKKDEFKNLKSFLVEDPSMISIEFQKGAAAELEKIVFS STNIKSLHRLGGLPKLKEPELKSNRFLVSFSEEGETHKKCSLASSPSRRMNSNSSSTS LLRDC</aaseq>

Gene Sequence

<dnaseqindica>1..3886#4336..4775#atggaccagagcgcggtgagctcgctgctggggcagcttaccggcctcctcgttgacgaggcgaagctactcggcggcgtccggggcgacgtgcaattcatcaaggacgagatggagagcatgcaaggcttcctcctggatgccgccgatgccgccaacaacaacagcagcagccagcaggtcctggcatggcagcggcaggtccgggaggtcgcctacgactcccagaaatgcatcgaccactacgtgcagacggtgggcgccagccgcccgtcggccggcctcctcggctccgtccagtggctgccgcagctggtgatgacgttgccaagccgccagcgcaccgccaacaagatcaagaagctcaaggcccgcgcgcgcgaggtgggggagcggcggcagaggtacggcgtcaaagctccgactcggagcggcggcgtcaaggtcatcaccgcgccgatgctctcgccgcagcaggaggcggcggagcacgcgcggaggcgccgtgccatagctgacgccaccgactgggtgaacaccgacgcgcagcacgtgatggactggatagcggccggcggcaaaggacacaacgacgatgatggtggccgggaggagtacatacattggatcaaaggcttcctgcacatgccccacttcaccaccgagagcttcttgacggagctcatgagcaacaaggccgatgctaccgccttcttgctggagtacaccaaagagttgttcggagggccgctccactatttggaagggcatttgttgtggccacataaagatgatgggcatgataagaaggccacgacggcagcggcatcatccccttctcaagaccaccacgatgctgacaaaaagaagccagtagcagctgctgatccgtcagagagggccaaagaagcagctgttgatccgtctgggaaggcgaaggagcacaagcgttggatcacccaaggggagaagaaagcggcggacacgtcaacctcttcagaagtccatgattctgctgagaagaggatgcctttagcagatgttaatccgtcggagatggcggaagcatcatcagctgatgatggacataacaaggcaacggaaggccataccaaagagttgttcggagggccgctccactatttgaaagggcatttgttgtggccacataaagatgatgggcatgataagaaggccacgacggcagcggcatcatccccttctcaagaccaccacgatgctgacaaaaagaagccagtagcagctgctgatccgtcagagagggccaaagaggagaagaagcaccagatcatcagttgggtacatggagcacttacgagcgacggcatcaacatatttcacacgaaagatacccacggcccaaggctcctcgccattgttacatcaccggttcgtcgcgaggcccacgacctcgaagacgaagaaccacatgggctcaggcctgcaacagagatcgcacgtagggtgttcaataattattattcccgccaaggcggccgcttcgactttgccgtgtgggtcaacgccgaggaacactcacatagcaccgccaggcttcggagcatactccagcaggtggagaagcaggcgcaggtgcagcctcaggagcagcggcagcatccatcatcttcttctcgcgataaaaaagacggtggtgacgagacgacaagattgcaacaggagatcctaaagcacctgacagggaagaagttcttgatttttcttgctgaccaccaggacgaaacaccatggacacagatactacctgctctgccgactgatagcaccaatgaaagtgcagtcatattgagtcctctggtgcagcaagcataccagtacgttgggtggtacgtgctcagccttttcttcttgctaaagcactcccgctatagagtctacttctactctcatcttgttgcaacacggaacaaggccaaagagttgctgcgggttggcgccgatcaacacaaaggagaagatttgcatgacctcgtcaatcatatattggaacgttgtcgctgggattcattttccagcaagatgtttcttcatgctctttatgctaatcatcaaaggagcaagccagagctggagaacttgttgctttctctgaatgaattcagcacggtgagcaatgccagaaacatgatcaaattttgctacgatgacctgcacagttacaaggtttgcttccagtacctgtccattttccccttgggattcaagatcaggaggacaagcttggtcaggcgatgggctgcagaaggccttatcgtgggaagagacgggctagctgcaacggatgaagctgagcgctgcttcgatgccatgattgatcgaggccttctccttcctgccgacaacaccgacaacccttcaggcaaagtgaagatgtgcacggtcgatccacatgttttctccttcattgccaggttgcacaaagacgatggccgtgctccagctgctgatagcatcgacctgccgcccgccctggctcatcgcatctccattgccagaagaattcaactctccaacaagacacgacaacgagtcagcgagggtttgaagaagcagatggacggcggtggcgagccacaagactctgtcgcacaaggcatggtctgtggaattcaactttccaacaagacacgacgacgacaagccagtgaggggttgaagaagaagatggacagcaatggggagccactagtcccagagccaagatcgcaagactctgcagtggaagacgtggtaaagcttcttgacttgtttcctacaactgaatcaggatggatcaaagtgctagaccttgaaggctgccgtggactgaagaagaagcacctcaagaacatctgcaacagggtattccagctcaagtatctgagcttaaggaacacagacattgctgagctgcccaaggaaattaacaagctccaagacctggagacatttgacatgaggggaaccaacatagaatccttccctgcaaaatccattgttctcccaaagctggcgcgactgctttctggtgttgctcacaccgacgctccaactccaagtaaggatgataatcttacaagtagaggatcttctcatgaatcatttactgcaatccatattccccgtggaatcaagaacatgacaagcatgcagatactatcccatgtccaagtttctgaccatcacgacgaggctgcagcactggaagatttagcccggctgcagctgctatggaagcttggtgttgttatccatgccaagcaagcttaccttgtgctcaaagtggttgggatgctaaatgaatgcctgaggtctttgtcaatccgtctccaagatggtggagaggatcctgatctgaacaacacaccaccaatattctcacctccaagatctcttgcaagccttagcatcagtggcaggataggtggcctgcctacttggatccaaaatctggaacaactctctgacataactctgtgcgacacctccttgaaagactctgatataaagatcttgtgtgctagtatcaacctgcgcttcatcaggctcttgcgtgagtcgtacaaccagaacaagctcagttttgaaaagggattcagaaaccttgagattctcatcattgagggatcaggcaccatctctgatgtccattttgatccgagagtggcacctaagcttgagaagattgtctggagctccacctgcaagatggaaaatcttgggatcgacaaccttcaaggactgaaagagattgtgctcaaaggcgactgtgacctgaatcgcatcaggctatccgtcaaagcgaatccatgccatcctaaccttacacacactccaactctcaactctccaacaatccaacccggtgaggacactgcagctgcaaccagcacttcggcaacaaacaagtagatgtttttgcgtgcgcttctcttaattcctggctttcgcatttgtgtggttatttgttctttgttcagagtgtgattacttggtgtttttttgttattctgctgtgtgtgatatgatttgattggctactgcaaatgtaattcaggtgatgtgattaatgatacctgttaaataagttgtgtgatactaggctgagtatacatgttctatggttttataggtagctaatctttaaaacatttttttcttcagactaaagatgaggtgttacagcctgaacctactttgtttcatatatatatactgttagagtacaggatagttagagtcccaagcttcttgagagcctaagtatccatggttacacacataagggtcagcttcttgcattgttggccgaaggtcttaataaacttgccaaggttactttgagtagcacctcattgaaccaagacaatttgaaggttctcggtgagttgtctagcttatgctatttcaggctcagacacaatggatacacaggtgaaaaactcaccttcaagaaggatgaattcaaaaatctcaagtcttttcttgttgaggaccccagcatgatcagcatcgaatttcagaagggagcagctgcagagctcgagaagattgtattctcctccaccaacataaagtctcttcataggcttggaggccttccaaaattgaaagagcctgagttgaagagcaacaggttccttgtttcattctctgaagagggagaaactcataagaaatgttctctagcaagctcaccttcaagaagaatgaattccaacagctcaagtacctccttgttgagggactgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0646300, RefSeq:Os11g0646300