Os11g0652900

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0652900| Description = Similar to Short chain alcohol dehydrogenase-like| Version = NM_001074913.1 GI:115486474 GeneID:4351037| Length = 15...")
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Gene Name

Os11g0652900

Description

Similar to Short chain alcohol dehydrogenase-like

Version

NM_001074913.1 GI:115486474 GeneID:4351037

Length

1575 bp

Definition

Oryza sativa Japonica Group Os11g0652900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27900216..27901790

Sequence Coding Region

27900216..27900383,27901091..27901628,27901702..27901790

Expression

GEO Profiles:Os11g0652900

Genome Context

<gbrowseImage1> name=NC_008404:27900216..27901790 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27900216..27901790 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccgcagctcgcagcatcccggaccggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgggcatgcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcggcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccaccgtctgcgacgtctccgcgcgcggcgaccgggagaggctggtcgccgccgcggcgggggagttcggcggcaggctggacatcctcgtcaacaacgtcggccggaccatgttccgggcggcggcggcgtgctccggcgaggacttcgccctgctcgtggccaccaacctcgagtcctgcttccacctctcccagctcgcgcacccgctcctgctcgccgccggcggcggaggcggctgcgtggtgaacatctcctccgtcgccggcaccgtcggcataccggcgctggccgtgtactccatgaccaagggcggcatgaaccagctcacccggagcctcgccgccgagtgggccggcgacggcatacgtgtcaactgcgtcgcgccgggaggcgtcaagactgacatctgccaagacgagacgatagacccggagctgatcaagagcgagatggaccggctgccgatgcggcggctggcggagccggaggaggtggcggcgacggtggcgttcctctgcatgccggcggcctcctacatcaccggccaggtcgtcggcgtcgacggcggacgcaccattacctag</cdnaseq>

Protein Sequence

<aaseq>MAAAAARSIPDRWTLAGATALVTGGSKGIGHAIVEELAGFGARV HTCARNAAELEASRRRWEERGLRVTATVCDVSARGDRERLVAAAAGEFGGRLDILVNN VGRTMFRAAAACSGEDFALLVATNLESCFHLSQLAHPLLLAAGGGGGCVVNISSVAGT VGIPALAVYSMTKGGMNQLTRSLAAEWAGDGIRVNCVAPGGVKTDICQDETIDPELIK SEMDRLPMRRLAEPEEVAATVAFLCMPAASYITGQVVGVDGGRTIT</aaseq>

Gene Sequence

<dnaseqindica>1408..1575#163..700#1..89#atggcggccgccgcagctcgcagcatcccggaccggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgggtatatacacgcaactatatacatcaccgtatatatacgagtataatacgagcgtatatacctacgtatacaggcatgcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcggcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccaccgtctgcgacgtctccgcgcgcggcgaccgggagaggctggtcgccgccgcggcgggggagttcggcggcaggctggacatcctcgtcaacaacgtcggccggaccatgttccgggcggcggcggcgtgctccggcgaggacttcgccctgctcgtggccaccaacctcgagtcctgcttccacctctcccagctcgcgcacccgctcctgctcgccgccggcggcggaggcggctgcgtggtgaacatctcctccgtcgccggcaccgtcggcataccggcgctggccgtgtactccatgaccaagggcggcatgaaccagctcacccggagcctcgccgccgagtgggccggcgacggcatacgtgtcaactgcgtcgcgccgggaggcgtcaagactgacatctgccaagacgtaagctaaataatcccttcgttacagattataaatcgtcattttgattaagtttatagataaatatagtaatatttacaacaccaaattagttttattaaatttataattaaactagaacaaaatacacgtgcgttgcaacggatgaaggttattttagtattattattattattattgttttacggtttagctagagtgaaaatcatcgtgggaattcacttgtttttttttaagaaaatcatgggctataaataggagtctgactctctagcatgactttttttaaagaaatttcttataagatatcttctgtattttaaaaagcgaacgaacttgcaaaaggactcaaacacagatttgtatttctaaaaacgaacaaacttaaaaaccgactcaaacacaaataacctactggaacaacggcgaaaacatcttcaatttttataatagtagagatatatttatttttggatgaaaatgtaactaatctttttctataaacttaatcaaacttgaaacagcttgactttgaccaaagacaaaactgacttataatgtaaaactgagggagtatataccagctcagtcagttgatctccagctcagttactagtacataattagtgcatgattaatggtagaattagtgtgattaatcacatcattgattttgattgattaatttcggtggatggccggagcaggagacgatagacccggagctgatcaagagcgagatggaccggctgccgatgcggcggctggcggagccggaggaggtggcggcgacggtggcgttcctctgcatgccggcggcctcctacatcaccggccaggtcgtcggcgtcgacggcggacgcaccattacctag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0652900, RefSeq:Os11g0652900