Os11g0653300

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0653300| Description = Conserved hypothetical protein| Version = NM_001074914.1 GI:115486476 GeneID:4351038| Length = 3213 bp| Definition ...")
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Gene Name

Os11g0653300

Description

Conserved hypothetical protein

Version

NM_001074914.1 GI:115486476 GeneID:4351038

Length

3213 bp

Definition

Oryza sativa Japonica Group Os11g0653300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27930778..27933990

Sequence Coding Region

27931284..27933830

Expression

GEO Profiles:Os11g0653300

Genome Context

<gbrowseImage1> name=NC_008404:27930778..27933990 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27930778..27933990 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggatcaaacgctgggcgccgtggggtcgctgctgggtgtgttgtcgaaggtggtgaaggacgaggcgaagctgctgggaggcgtggagggcgacatccagttcatcagggacgagatggacagcatgaacggcttcctggtgcacgtcaccaagacgaccaaccacgacgaccagctccgcgcctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatcaagctctacatgcgggacgtcgtcccggaggagaaggctggcctccgcggctgcctcctccgccgcgtgcccagcgtctgcaagccctactgctcgttcctccaccgcaatctcacgacccgcgaccagctcgcgaggaggatccacgagctcaaggaccgggtgcgcgagatcagcgagaggcggcagcgctacgacgtcaagctccccgaaggcgatgcggtccagtccccgccggtgtcccaggacaggaagacgaaggagaagagggacgagttcgtacgtgccctcgaagatggccagtctcctttccgagacgcggtccgcaagctctccagcggtgatggtggtgccctgatcagagaccgtgctgctcctgcactcgtacgtagcatcgtcgacacatgcataacgaagctggccgatgaccatgaccgcatcatcaagatgctgcttcgttctctgtacgcccatccctgtgggacaaaagaactggagaacttgtccaacaagctcagagaaggagaagatgtggccaagcaagtgatgcttttctgctacagcaagctgtctgtgcactacaagagctgcctgcagtatctgatcaccttcgaactagaggaaagcatcagcaggacaagcttggtgaggaggtggctcgccgaaggcctagtgctcaatgaccaacaacaacatgggatagatgatgatgaaagcatggaagaggccggtgagcgctgcttcgatgatctcctgtttcggggcttcctttctcctgcccctgcacatcgttttccgaggaccggcggcctcaagctcaagtgctgcgttcttgatgcttcagtcaagacgttcatctacgatatgtccacaagcgagaattttttggatgacctgccaactcaccttcggcatcagattaatatcagaaagacggctcggcggcgggagctgccacagaagcagcaccagcacaaactacggtggacgcagtcgaccatctgctgctgctactgcagggttccaagaataatgaaggcaacaacagctgacgctggaggcagcaacatcaatgatccgctgctgccgcttcaccatcccatggatgagatagtaactctcctcaaaaccctacctccggagtaccgtctcaatgtgctggatctaggaggttgccttgggttgaagatgagccacctaaagaacatctgcaagctggtgccgtcgctcaagtatctgagcctccggaagaccaatgtttctcagcttccaaagaagatgaaccgactcctgcatctggagacgctcgacatcagggacaccaacgtgcggggtgcagctatgagggatatcttcctcaatgagctgaagcatctccttgtcggccgcatatttattcctgatgctgccgccggcgacaatgaggcatcagcactactctccaccgtgctgatgcctcctaagatcagcaagaacacggagatattgcgccatatccagatcaaggatggcccagaagcccagctccagctttcgcatgtcgcgtctctggatgggctaaggaagctgggggtggtcctcgacggcagggaagataacatcaagcttttgctcaccacaattgccaggcggagcgataccctgcgatcactatcagtctggatcaccgagccgccgccggagcacagtgtcactggtgaacgccacggcgttttcgtgactctcgaccacaaggagaaggcgaccacattgttctcgcatcccagtaaacttgagagcttaaacctcaagtgctacaagggaaaaaacaacaacaacaactacaatattcctccatggatcataagcctccaaaagctctccaagatcactctacgtcacagcttactttccagaggtggtctgagagagcttggcaagatgaagagcttgcgctgcctcaagctccgtcaggaatcatatatcgaagccgacgtcaccgtgaagtacggggagttcgaggacctcaggcttcttgtgattgataagatctccaacaagatgaccaaacttgtcttcgaagaagatgcagctcccaagctggagaagattgtctggaacttcgacacgatgacaacgctgatggggatcacggtaaacaacatcaaagggatcgaaaatcttcaaaacttgaaggagctatggatcaacggcgtcaacataccgtttccttcaagatcccgtgaatggaaggatataaccacagttccgcagaaattatggaggcacacttttggaccggtaattgaaagcttagcatctgaaagctga</cdnaseq>

Protein Sequence

<aaseq>MADQTLGAVGSLLGVLSKVVKDEAKLLGGVEGDIQFIRDEMDSM NGFLVHVTKTTNHDDQLRAWMKQVRDITYVADDCIKLYMRDVVPEEKAGLRGCLLRRV PSVCKPYCSFLHRNLTTRDQLARRIHELKDRVREISERRQRYDVKLPEGDAVQSPPVS QDRKTKEKRDEFVRALEDGQSPFRDAVRKLSSGDGGALIRDRAAPALVRSIVDTCITK LADDHDRIIKMLLRSLYAHPCGTKELENLSNKLREGEDVAKQVMLFCYSKLSVHYKSC LQYLITFELEESISRTSLVRRWLAEGLVLNDQQQHGIDDDESMEEAGERCFDDLLFRG FLSPAPAHRFPRTGGLKLKCCVLDASVKTFIYDMSTSENFLDDLPTHLRHQINIRKTA RRRELPQKQHQHKLRWTQSTICCCYCRVPRIMKATTADAGGSNINDPLLPLHHPMDEI VTLLKTLPPEYRLNVLDLGGCLGLKMSHLKNICKLVPSLKYLSLRKTNVSQLPKKMNR LLHLETLDIRDTNVRGAAMRDIFLNELKHLLVGRIFIPDAAAGDNEASALLSTVLMPP KISKNTEILRHIQIKDGPEAQLQLSHVASLDGLRKLGVVLDGREDNIKLLLTTIARRS DTLRSLSVWITEPPPEHSVTGERHGVFVTLDHKEKATTLFSHPSKLESLNLKCYKGKN NNNNYNIPPWIISLQKLSKITLRHSLLSRGGLRELGKMKSLRCLKLRQESYIEADVTV KYGEFEDLRLLVIDKISNKMTKLVFEEDAAPKLEKIVWNFDTMTTLMGITVNNIKGIE NLQNLKELWINGVNIPFPSRSREWKDITTVPQKLWRHTFGPVIESLASES</aaseq>

Gene Sequence

<dnaseqindica>161..2707#atccaaaatttcgctgatttctgctcatttccaaacacatatacattattcacagctagcactgcagtaattaagtagctagcagaggggcagagagagagagtgagtgagaaagagatcaagatcattattatatattgcatttgataatatatatataatggcggatcaaacgctgggcgccgtggggtcgctgctgggtgtgttgtcgaaggtggtgaaggacgaggcgaagctgctgggaggcgtggagggcgacatccagttcatcagggacgagatggacagcatgaacggcttcctggtgcacgtcaccaagacgaccaaccacgacgaccagctccgcgcctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatcaagctctacatgcgggacgtcgtcccggaggagaaggctggcctccgcggctgcctcctccgccgcgtgcccagcgtctgcaagccctactgctcgttcctccaccgcaatctcacgacccgcgaccagctcgcgaggaggatccacgagctcaaggaccgggtgcgcgagatcagcgagaggcggcagcgctacgacgtcaagctccccgaaggcgatgcggtccagtccccgccggtgtcccaggacaggaagacgaaggagaagagggacgagttcgtacgtgccctcgaagatggccagtctcctttccgagacgcggtccgcaagctctccagcggtgatggtggtgccctgatcagagaccgtgctgctcctgcactcgtacgtagcatcgtcgacacatgcataacgaagctggccgatgaccatgaccgcatcatcaagatgctgcttcgttctctgtacgcccatccctgtgggacaaaagaactggagaacttgtccaacaagctcagagaaggagaagatgtggccaagcaagtgatgcttttctgctacagcaagctgtctgtgcactacaagagctgcctgcagtatctgatcaccttcgaactagaggaaagcatcagcaggacaagcttggtgaggaggtggctcgccgaaggcctagtgctcaatgaccaacaacaacatgggatagatgatgatgaaagcatggaagaggccggtgagcgctgcttcgatgatctcctgtttcggggcttcctttctcctgcccctgcacatcgttttccgaggaccggcggcctcaagctcaagtgctgcgttcttgatgcttcagtcaagacgttcatctacgatatgtccacaagcgagaattttttggatgacctgccaactcaccttcggcatcagattaatatcagaaagacggctcggcggcgggagctgccacagaagcagcaccagcacaaactacggtggacgcagtcgaccatctgctgctgctactgcagggttccaagaataatgaaggcaacaacagctgacgctggaggcagcaacatcaatgatccgctgctgccgcttcaccatcccatggatgagatagtaactctcctcaaaaccctacctccggagtaccgtctcaatgtgctggatctaggaggttgccttgggttgaagatgagccacctaaagaacatctgcaagctggtgccgtcgctcaagtatctgagcctccggaagaccaatgtttctcagcttccaaagaagatgaaccgactcctgcatctggagacgctcgacatcagggacaccaacgtgcggggtgcagctatgagggatatcttcctcaatgagctgaagcatctccttgtcggccgcatatttattcctgatgctgccgccggcgacaatgaggcatcagcactactctccaccgtgctgatgcctcctaagatcagcaagaacacggagatattgcgccatatccagatcaaggatggcccagaagcccagctccagctttcgcatgtcgcgtctctggatgggctaaggaagctgggggtggtcctcgacggcagggaagataacatcaagcttttgctcaccacaattgccaggcggagcgataccctgcgatcactatcagtctggatcaccgagccgccgccggagcacagtgtcactggtgaacgccacggcgttttcgtgactctcgaccacaaggagaaggcgaccacattgttctcgcatcccagtaaacttgagagcttaaacctcaagtgctacaagggaaaaaacaacaacaacaactacaatattcctccatggatcataagcctccaaaagctctccaagatcactctacgtcacagcttactttccagaggtggtctgagagagcttggcaagatgaagagcttgcgctgcctcaagctccgtcaggaatcatatatcgaagccgacgtcaccgtgaagtacggggagttcgaggacctcaggcttcttgtgattgataagatctccaacaagatgaccaaacttgtcttcgaagaagatgcagctcccaagctggagaagattgtctggaacttcgacacgatgacaacgctgatggggatcacggtaaacaacatcaaagggatcgaaaatcttcaaaacttgaaggagctatggatcaacggcgtcaacataccgtttccttcaagatcccgtgaatggaaggatataaccacagttccgcagaaattatggaggcacacttttggaccggtaattgaaagcttagcatctgaaagctgagacgtttcttctacctccatcctgtaaggtgagctatatatgttctttctctcatccgcgattgaactcatcgatgagcctcctccatgccacatttgccttctccgtctgtctgctagtgccaccatatccattgccaccccttgatctctcacctgctgcctcctaaccactatgtttaccttattcctgttgctgaccctgcccaccatggattcacccacccaccagcagctacatgagccgctggatatatatcactccaatgaagtgtcttatatataagaatttctcatcagttccctgagaaataacaaagccggaagaaaaaagaccgatctatcgctgatgcactacttaatatcctgcctatgttttttatgtgaattctgtaacgtgatgccatgtctgtgtgtgttgctgttcaacatgacaatgtatatatatcatgcatgtacttatcgcacctactgaaatatatactgtaatgtattggagtcaccact</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0653300, RefSeq:Os11g0653300