Os11g0659500

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0659500| Description = Similar to Acyl-ACP thioesterase (Fragment)| Version = NM_001074932.1 GI:115486512 GeneID:4351056| Length = 4763 bp|...")
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Gene Name

Os11g0659500

Description

Similar to Acyl-ACP thioesterase (Fragment)

Version

NM_001074932.1 GI:115486512 GeneID:4351056

Length

4763 bp

Definition

Oryza sativa Japonica Group Os11g0659500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28311193..28315955

Sequence Coding Region

28311488..28311742,28311966..28312034,28312176..28312362,28312500..28312613,28314506..28314639
,28314743..28315261

Expression

GEO Profiles:Os11g0659500

Genome Context

<gbrowseImage1> name=NC_008404:28311193..28315955 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28311193..28315955 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagggtctcttgccgcctcagcattcttcccaggtccaggctcatctcctgcagcatcagctagaagctccaagaatgctgctgttaccggcgaattgccggagaatttgagtgtccgtggcattgtcgcaaagcctaacccacctcctgcagccatgcaagtaaaggcacaggctcaaacccttcccaaggttaatggtacgaaggttaacctcaagacggtgaagcctgacatggaggaaacggtgccttacagtgctccaaagacgttctataaccaactgccggattggagcatgcttcttgcggctattacaaccatcttccttgccgcagagaagcagtggacactgcttgattggaagccaaagaaacctgacatgcttgttgacacatttggctttggtaggattatccaggacggtatggtgtttaggcagaacttcatgattcggtcctacgagattggtgctgatcgtacagcttctatagagacattgatgaatcatttacaggaaacagctcttaaccatgtgaggactgctggtcttcttggagatggttttggggctacaccggagatgagcaaacggaacttgatatgggttgtcagcaaaatccagcttcttgttgagcaataccccgcatggggagatacggttcaagttgacacatgggttgctgctgctggcaaaaatggcatgcgtcgagactggcatgttcgtgactacaactctggccgaacaatcttgagagctacaagtgtttgggtgatgatgcacaagaaaactagaagactttcaaaaatgccagatgaagttagagctgaaataggcccatatttcaatgaccgttcagctataacagaggagcagagtgaaaagttagccaagacaggaaataaagttggtgatgatgctacagagcaattcataagaaaggggctcactcctagatggggtgacctcgatgtcaatcagcatgtgaacaatgttaaatatattgggtggatccttgagagtgctccaatttcagtactggagaagcatgagcttgcaagcatgaccctggattacaggaaggagtgtggtcgagacagcgtgctgcaatcacttaccaccgtgtcaggggaatgcaccagcattggcgccgacaagcaggcttctgccatccagtgcgaccatcttcttcagcttgagtcaggagctgatattgtgaaggcacacacagagtggcgaccaaagcgatcgcacgcagcagctgagaacgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MAGSLAASAFFPGPGSSPAASARSSKNAAVTGELPENLSVRGIV AKPNPPPAAMQVKAQAQTLPKVNGTKVNLKTVKPDMEETVPYSAPKTFYNQLPDWSML LAAITTIFLAAEKQWTLLDWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGAD RTASIETLMNHLQETALNHVRTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAW GDTVQVDTWVAAAGKNGMRRDWHVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVR AEIGPYFNDRSAITEEQSEKLAKTGNKVGDDATEQFIRKGLTPRWGDLDVNQHVNNVK YIGWILESAPISVLEKHELASMTLDYRKECGRDSVLQSLTTVSGECTSIGADKQASAI QCDHLLQLESGADIVKAHTEWRPKRSHAAAENA</aaseq>

Gene Sequence

<dnaseqindica>4214..4468#3922..3990#3594..3780#3343..3456#1317..1450#695..1213#gtaaaagaaagaggagaaattctcccgtcgtctccttccttgcgccaagaaagacgagccgcggctcaacagcggagtggaggggcgccgatctccatcgccgaggagagcagagcaggggaggggaggggatcctggtgagcctcctcttcctgattcacctctctctcattctagcttcgggggactacttttgcctcgaatttgcttgcgttcgttcgttaaccctagcttcttctcttctagatctggaggaagctcttctcctccttaatttcagagccttaatacaagtagtaacagtttaaccccccccccccccatgtcccaagttggatccgcccctgcgagttccgatattgggtcctcccaattctcaatgccattttgttcatcggggggcatatggttcattttgcctgcattgattcaaatgtggtttcgaatcgtttgggaaattcgcgggtgtacttgtttatgatatatgaggccttttttttccccatgaggaggcaaactttttagtgggtggatccactagttcatgcctcaattttttttctcctcttttaagttttccaaagagctacattgttgtaaagtgtctaatacaattgattgtttattcaggttagcgcttttggcgtgtgattgatttctaaacgaattttgggccgtgaagggaagttcaatcatggcagggtctcttgccgcctcagcattcttcccaggtccaggctcatctcctgcagcatcagctagaagctccaagaatgctgctgttaccggcgaattgccggagaatttgagtgtccgtggcattgtcgcaaagcctaacccacctcctgcagccatgcaagtaaaggcacaggctcaaacccttcccaaggttaatggtacgaaggttaacctcaagacggtgaagcctgacatggaggaaacggtgccttacagtgctccaaagacgttctataaccaactgccggattggagcatgcttcttgcggctattacaaccatcttccttgccgcagagaagcagtggacactgcttgattggaagccaaagaaacctgacatgcttgttgacacatttggctttggtaggattatccaggacggtatggtgtttaggcagaacttcatgattcggtcctacgagattggtgctgatcgtacagcttctatagagacattgatgaatcatttacaggtaagtggttgcacattctgtttttagttttatttctcatttcagcattttgttatagattcatatgtctctttcaagctggcaattatttaaaattttgcaggaaacagctcttaaccatgtgaggactgctggtcttcttggagatggttttggggctacaccggagatgagcaaacggaacttgatatgggttgtcagcaaaatccagcttcttgttgagcaataccccgcatggtacttctttgcaaacctttgctcctcttaatatatgtatctttggttgctttctatcaattccttaccgtaagttttcatttttgtcacattttaaattacttcatatttgttttgcttcttttacagatatcgttttatgtactactttatagctgtgtgtccttggcatatttgtttctatttgtttaaagaagattcttactcaggcaacagtagtatttagctcaatatttactttaacatggtttatcataatgttgtgtggatctctggtctgatttctccatatactggttggttgatgaaaatcaagtgaatcttttacttggtcgtatatttcgctgctgctggtttgcaagaatatgggttgaaatttttactgctatagaaggccatgtttttctttgatttcccgtgataggcctcatgtttaggaggtgctgttattcctcattggttgactaagaaatgtgtagtaatatcagctccagttttgttggatcaaggatagagtttgtggcaaactaaattttccaattaggaagaaatgaatatattcctacttaagtggggaggagcatgcactttgtttccaattgtcgagccctgattataacacaaactatcaagttatttctttgcatttagaaacaggatttgcatcttgagtaatcctcattaaagacataatctagctttagtacatgcaacataaaagttctgatgccccaaggcctttttggtacagcactgtaagtctgtagctatccttgctctatgttgtcctcaaaagacacaacatcagttaaaaacaaagaagaacagtaatctctcctttagacgtcagttattagtggagtagtaatttagatccaagagcaacttcatttgttacgccttattcattgcccaaagctgcctcattaaatgatgtcttctctgtgcttccttggatcttgaattatgttgagtgggaatgccagaacgggcatgtactttcgttttccagcgataagctccgttttaaaaataaattagcaagtgatttatttacatttacaaacaaaaatttaccactcgggtagttcacattaaaattattgtctagctttattacaagcaacatgaaaatttcgataccccaaggcctgagtttggcagcactataactctgttgccctgttttgtcttgaaaagtataatatcacttaacaggacaatgctctcccgaaaacataactgattagtggatagagagagtggtttaggtggtgtttggatccggggactaaattttagttcatgtcacatcggatgtttggacactaattagaaatattaaacatagactaataataaaatttagtcccaatagataattgactggttacttcatattcattgcccagagctgcctcattaaatgttgtctgttctgtgctttcttggatcttgaattaaaagacgtctgtacagggtaccacacctcaagggatcacaattcagaaagtttccctttattggtctgcagtaaatgattccatcgtatagaaaagaacaaaagcaattaatgctgtgccatatcatgggagaagctaaggacccatctagaacagtgaacttttgttgaacagcatctgtcagtttaaaaatctaggtggtcatcattcatcaaataagtggtgctagtgctactattgcacacgttatgtttaaatcctcttgtcaactgtgtcaacaagtggttgaaaacttctttttgggggttttgagttataaaaatggaggtgcaatttcaaattgtttttttagttcagatacaattgccgacgtctttctgtggatcaaaaaaatgacagatgtattgtaccaacctgctatggttttaggggagatacggttcaagttgacacatgggttgctgctgctggcaaaaatggcatgcgtcgagactggcatgttcgtgactacaactctggccgaacaatcttgagagctacaaggtttgggcttcaactttattctattgcaagaatcatctgtatcgttttttttatgaggatatccaatcttggtatttctgcttgatcacatcattgataattgctaattgtgctccttttccaatcctttcttgcagtgtttgggtgatgatgcacaagaaaactagaagactttcaaaaatgccagatgaagttagagctgaaataggcccatatttcaatgaccgttcagctataacagaggagcagagtgaaaagttagccaagacaggaaataaagttggtgatgatgctacagagcaattcataagaaaggggctcactgtaagtcagctagacatagttacatactaaattatcattatgcctcaactgcaatcatttatctaagaaaaatagtaatatttgatctcacccctcatttattttaaatgatctttgatggactcttgtttactgcaacagcctagatggggtgacctcgatgtcaatcagcatgtgaacaatgttaaatatattgggtggatccttgaggtggttattcttgtcccttttattcattgtttagagaaaaataatttggctttatccttttatatggtggttgttagggaaccattttatgtagtacttgcaattattttctagagattctgatctgaccatctgtattgttgatattgtcattagtcttacatctggtcagtcagaaggctttcaaacatgtttttgagttctttctaattttttcccccagagtgctccaatttcagtactggagaagcatgagcttgcaagcatgaccctggattacaggaaggagtgtggtcgagacagcgtgctgcaatcacttaccaccgtgtcaggggaatgcaccagcattggcgccgacaagcaggcttctgccatccagtgcgaccatcttcttcagcttgagtcaggagctgatattgtgaaggcacacacagagtggcgaccaaagcgatcgcacgcagcagctgagaacgcgtaaacaaacaaaccgacgaaaatctgtgggagggagaatatcaaacttcccttgcctctgttgccctgaagcttatcttgaagtgtgagttgtattctgtaaaaaattagtagtttccatagtgtgaggttggaggggaggtgttggtgcttgcctactgtacctgctacatctattatttcttgattctttgttcgcttttttttttcttttttgtttttaacccctgtggagataagacaggttttgaagtgtggaagaggttgtttcaatcgtctaattgattcaactattcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0659500, RefSeq:Os11g0659500