Os11g0676960

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Revision as of 09:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0676960| Description = Similar to NBS-LRR type resistance protein (Fragment)| Version = NM_001189782.1 GI:297728694 GeneID:9269902| Length ...")
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Gene Name

Os11g0676960

Description

Similar to NBS-LRR type resistance protein (Fragment)

Version

NM_001189782.1 GI:297728694 GeneID:9269902

Length

4727 bp

Definition

Oryza sativa Japonica Group Os11g0676960, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29177922..29182648

Sequence Coding Region

29177922..29179776,29180021..29180084,29180451..29180503,29181922..29181923,29182050..29182120
,29182460..29182542,29182587..29182648

Expression

GEO Profiles:Os11g0676960

Genome Context

<gbrowseImage1> name=NC_008404:29177922..29182648 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29177922..29182648 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaccatattagattctttggttggatcatgtgccaataagttgaaagagattattactgaagaggtgatacttattctagggatacaagaagagctcgcagagttgcagcggaagactgaactcatacattgttgtattagtgatgctgaggaaaggaggatggaagagtcagcagttgacaattggcttggtcagctaagagaagttctatatgatgttgatgatattattgacttggctagatttaagggaagcattctactaactgatcatccttcatcgtcatcaaggaagtcaattgcttgcactggcctgtcaatttccacttgcttttctaatgttcaggcacgtcatgaggttgctgtgaagattagaagtctcaacaggaagatagaaaacatttcgaaggacagagtatttttgacactcaagagtacggttcctactggaagcagttcagtattgagagtgagaaaaagttcccacctacttgagcccaacattgttggcaaggagatcatacatgcctgcagaaaaatggtagatttagtgcttgaacataaggggagaaaactttataagcttgcaattgttgggactgggggagttggtaagacaacattagctcagaaaatatacaatgatagaaaaataaaaggaagtttcaacaaaaaagcctgggtttgtgtttccaaagtgtactctgaagcttctcttttgagagaacttcttcgaattatggaagttcatcatgatcaagatgaatcaattggagagctccagagcaagcttgaaatagcaattaaggagacaagttttttccttgagttggatgacatgtggcaatctgacgcatggacaaatttattaagaattccgttgcatgctgcagaaatgggagcaattctcataacaactagaaataatattgttgccttagaaatcggagtggaccatacttatcgagttgatttgatgtcaaccgacgtagggtgggagttactttggaagagcatgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgttcgcaaatgtggttgccttcctcttgcaatcaaggttattgctagagtgttagcgagtaaagaacaaacagagaacgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaaccttccaaatgatttgagaggtgctttatatctgagttacgatgagttaccacatcatttgaagcaatgctttctttattgtagtgtatatcctgaagatgcaaacatttaccgtgatgatcttacaaggatgtggatcgctgaaggctttatagaggaccatggaggtcaactactagaagaaacagcagacgagtattactatgagctgatccaccggaaccttcttcaaccagatggtttatattatgaccacagcagctgcaaaatgcatgatcttttaaggcagcttgcttgttatttgtcaagggaagaatgttttgttggaaacccagaatcattggtaggtaacactgtgtctaaacttcgacgtgtttcagtcgtcacagataagaacatggtaatgttacctagcatggacgaggtgcaatataaagtaaggacatggaaaacttcttatgagaaaacactcagagttgataattcatttttcaagagatttccttatcttcgtgttgtagattggactgattcatttgtaccaagcatcccaggttgcatcgggaatttgatccatctacgtttgtctacaattggacatagtgataatgtatggatgccaaaattatttggacgcttcggttgtttgatgcaagctcattatcagcacatcaaccttcttattgagcaggaatcaatgaatggatcaatgggtagatgggggatgctgatcagtgccccttttggatacttcaaccttcctaatgttccacgtctggatgagtatcagtcactgtatctgaacacatacaaagtgaactctatggtttcagtctttcagatcaggcacagcgaggggaaaggaaggcatgacacttatcttcgtgtgctgcaaccccagctgcaatcacagatggagggagtgacatgcaatagagctttgcattatgccatgaattggtatatgtttactagtcaaatcgagggataa</cdnaseq>

Protein Sequence

<aaseq>MATILDSLVGSCANKLKEIITEEVILILGIQEELAELQRKTELI HCCISDAEERRMEESAVDNWLGQLREVLYDVDDIIDLARFKGSILLTDHPSSSSRKSI ACTGLSISTCFSNVQARHEVAVKIRSLNRKIENISKDRVFLTLKSTVPTGSSSVLRVR KSSHLLEPNIVGKEIIHACRKMVDLVLEHKGRKLYKLAIVGTGGVGKTTLAQKIYNDR KIKGSFNKKAWVCVSKVYSEASLLRELLRIMEVHHDQDESIGELQSKLEIAIKETSFF LELDDMWQSDAWTNLLRIPLHAAEMGAILITTRNNIVALEIGVDHTYRVDLMSTDVGW ELLWKSMNISESIELQTLQDVGIEIVRKCGCLPLAIKVIARVLASKEQTENEWKKILS KNAWFMNNLPNDLRGALYLSYDELPHHLKQCFLYCSVYPEDANIYRDDLTRMWIAEGF IEDHGGQLLEETADEYYYELIHRNLLQPDGLYYDHSSCKMHDLLRQLACYLSREECFV GNPESLVGNTVSKLRRVSVVTDKNMVMLPSMDEVQYKVRTWKTSYEKTLRVDNSFFKR FPYLRVVDWTDSFVPSIPGCIGNLIHLRLSTIGHSDNVWMPKLFGRFGCLMQAHYQHI NLLIEQESMNGSMGRWGMLISAPFGYFNLPNVPRLDEYQSLYLNTYKVNSMVSVFQIR HSEGKGRHDTYLRVLQPQLQSQMEGVTCNRALHYAMNWYMFTSQIEG</aaseq>

Gene Sequence

<dnaseqindica>1..1855#2100..2163#2530..2582#4001..4002#4129..4199#4539..4621#4666..4727#atggcaaccatattagattctttggttggatcatgtgccaataagttgaaagagattattactgaagaggtgatacttattctagggatacaagaagagctcgcagagttgcagcggaagactgaactcatacattgttgtattagtgatgctgaggaaaggaggatggaagagtcagcagttgacaattggcttggtcagctaagagaagttctatatgatgttgatgatattattgacttggctagatttaagggaagcattctactaactgatcatccttcatcgtcatcaaggaagtcaattgcttgcactggcctgtcaatttccacttgcttttctaatgttcaggcacgtcatgaggttgctgtgaagattagaagtctcaacaggaagatagaaaacatttcgaaggacagagtatttttgacactcaagagtacggttcctactggaagcagttcagtattgagagtgagaaaaagttcccacctacttgagcccaacattgttggcaaggagatcatacatgcctgcagaaaaatggtagatttagtgcttgaacataaggggagaaaactttataagcttgcaattgttgggactgggggagttggtaagacaacattagctcagaaaatatacaatgatagaaaaataaaaggaagtttcaacaaaaaagcctgggtttgtgtttccaaagtgtactctgaagcttctcttttgagagaacttcttcgaattatggaagttcatcatgatcaagatgaatcaattggagagctccagagcaagcttgaaatagcaattaaggagacaagttttttccttgagttggatgacatgtggcaatctgacgcatggacaaatttattaagaattccgttgcatgctgcagaaatgggagcaattctcataacaactagaaataatattgttgccttagaaatcggagtggaccatacttatcgagttgatttgatgtcaaccgacgtagggtgggagttactttggaagagcatgaatatcagtgaaagcatagaattgcaaactctgcaggatgttgggattgagattgttcgcaaatgtggttgccttcctcttgcaatcaaggttattgctagagtgttagcgagtaaagaacaaacagagaacgaatggaaaaaaatattgagcaaaaatgcttggttcatgaacaaccttccaaatgatttgagaggtgctttatatctgagttacgatgagttaccacatcatttgaagcaatgctttctttattgtagtgtatatcctgaagatgcaaacatttaccgtgatgatcttacaaggatgtggatcgctgaaggctttatagaggaccatggaggtcaactactagaagaaacagcagacgagtattactatgagctgatccaccggaaccttcttcaaccagatggtttatattatgaccacagcagctgcaaaatgcatgatcttttaaggcagcttgcttgttatttgtcaagggaagaatgttttgttggaaacccagaatcattggtaggtaacactgtgtctaaacttcgacgtgtttcagtcgtcacagataagaacatggtaatgttacctagcatggacgaggtgcaatataaagtaaggacatggaaaacttcttatgagaaaacactcagagttgataattcatttttcaagagatttccttatcttcgtgttgtagattggactgattcatttgtaccaagcatcccaggttgcatcgggaatttgatccatctacgtttgtctacaattggacatagtgataatgtatggatgccaaaattatttggacgcttcggttgtttgatgcaaggtatgtgattttatatactctggattcagattgcgcccattttttggcatgctattgtgtacatagatatatatcttttgctttactagatctcggtcttgaggatgaaaggatctagtactttgtaatatcgactataacagatatgacaataatcccaaagaaatggcagtataagaactacataactgtacttttagtttgttccggtaatcttctattaggttctgcaacttccatgcagctcattatcagcacatcaaccttcttattgagcaggaatcaatgaatggatcaatgggtagatggtaggagtaccagtctgactgtgtgtatattcagcaaatttagtctccctgatggttacagcctaccttaactgaatttcacatcagcaatgattgtgtgcaagaccctttttcctccaccagatgatgcttaaggaccacaaaatacatgtatatctcgatgaaccgaaaataaaagctttccctccattatccaacatcgttttttatcgagtccatccttctccatttaaacactgaacagaacagctgagctggttactctgtcatcaggagagatattatgaccaatacccccagcttttccccttgttattccctattgttgaattaactgtagttttgatgcattcatgtgttatgcagggggatgctgatcagtgccccttttggatacttcaaccttcctaatgttccacgtaagctttttcctaattattcccattgtaatctgctctactagcaatggcttatctgctgcatctcctgtacaggattcagaactcaagttcttgccgcaaaatggtttctgtacacacaaaaatggctaaaattgtaaatgcaaaatttcaaatgccacctgcgattaactgcagattgagttgctgatggaggtgaaaactcttctatgctttagagttcactcccaaatcatcaaccctcttatggactctgaaatcagaatcgagttgtgtccagttatttcagttcagtgctctagtttcatatcatctgttccgagtaattaacaactggagtagaaattatccttcccctgaactgaatcacaaatgcatcgcaaagcaatcaaagctgtggcgaaatacatctatccagcgacgagaagagaggaagggagggaggcgtcacgtacctgggttgaactcgaggaagaggaagaggccgcgccgtcgaccccgggcgccgtggcggcgaaggggcccatggagcgctccaacttctccaccctcggatctctgtcgctccctgcggcccaccctccagctccgcctccgcctccgctccccggcgccatcgccgaggtggggggttggacggccgtaccaggcgctccacgatgtacctcactcacttactcatcggagcgctcacccgcagcaacggtagttcccttctccaccatcaacctcgccactcaccggagcgccgccgtcggcgtcggcgacccacgcgccctttttccaacgacaatacgagatgatctgagggcttattcgaaaatgatcctccaatgctcaggcgcccttagatatcccggcccacacgtcatccgcaaaccccttgatggcccataaaatatgggccccacgttgcatcccgcccatgttcacttgcagcacgttgggctgtgaaagggtccaaagtccaagtatcgccccagagacggcccgtacactttgggcctcacattgctcctgccctgcgctgacgggccgcatgtccccgtagtatcgtcccggcccacaaattaaatggaatcgcttgctggcctacgcccattagtcggcctgaccgcaagagcgatagtctcctggatgagagaatccgccgccatggcagctgctcgccggagctccgccgactggccacggagctcctctccggcgaagatttgtatcacgtaggttcttcgagtcttccctttccataatgtgctttggctctttcatcttcctctctctgtctcacagatcagacacttgacgagcatgtcaatacctattgatgagagatgttgtatgtactgctgtttatgctatagaacctattgatgttatacagatctgagtgcattttttttctttgataatgtcaggtgtgagctcatgaaactaggattgtgttcagttcgtagcatcctcttctttcattctttggagtgaatcaatgatcctgttgaagtcaccaattggatgctttgttctctatgttctgcttctgtagctggatgagtatcagtcactgtatctgaacacatacaaagtgaactctatggtttcagtctttcagatcaggtatgttccttctttgacatggtcatcaatctgaaagcatgtgcagtagtatgattccatgatggaggaaacaaaacttaatcatgtgcacgtctttctttttcttttctaatcaaagtgcgcgcctgctttaacaccatggactataatattcacgtaaactaattataatcacatcaccaagtacgtccagtgcgcttcatgcagccacggggaagctgccttcttccaggtcaggattgtcgatcagagccaaaccaagcagtttgttcagagttcagaattacatagaaactactgaaatctgaatgctgaaaatgattttgttgttgcatgcaggcacagcgaggggaaaggaaggcatgacacttatcttcgtgtgctgcaaccccagctgcaatcacagatggagggagtgacatgtaaattaattgtaattaatgctactattatgctgcatgtaaaggcaatagagctttgcattatgccatgaattggtatatgtttactagtcaaatcgagggataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0676960, RefSeq:Os11g0676960