Os11g0686500

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0686500| Description = Disease resistance protein family protein| Version = NM_001075010.1 GI:115486668 GeneID:4351143| Length = 4044 bp| ...")
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Gene Name

Os11g0686500

Description

Disease resistance protein family protein

Version

NM_001075010.1 GI:115486668 GeneID:4351143

Length

4044 bp

Definition

Oryza sativa Japonica Group Os11g0686500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29636486..29640529

Sequence Coding Region

29636545..29637383,29637631..29640085

Expression

GEO Profiles:Os11g0686500

Genome Context

<gbrowseImage1> name=NC_008404:29636486..29640529 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29636486..29640529 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatggagtccgcggcggcgaccgcattcttgaagacagtcatggggaggctgttcatggcgctggagaaagagtacaacaagcacagaggcctcgcgcaagaaagccactccctgcagcaagacctccgcatgatcgccgccgccatggacgaccagcagctttccatggggaggagcgacgccgccgcacgcacggccgtcgcgcggctgtacaccgaggagatgctcgacctcgcgcacgacatcgaggactgcgtcgaccgcttcttgcaccgcctcacctgcaaccaccacaaacgcggcggcgccggcgccggagcatcgctgctgcgccgggtcacgcacgagctcagcaaggtcaagagccgctcgagcttcggcgacgagatccagaagctcaagaaacgcctcagggaagcgcaccagcgagtcctcaccatcaatccgccgcctattctcatcgctggtgggtcgtcgtcatcggcggcggtcgcgccgccgtgtcgggcagcgcgcagcccggtgggcatcggggaggacgtcgaagagctcctctcgatgctggacgaggtggagggcgagccggtgcagatgcgagtgatctccgtcgtggggttcggtgggttggggaagacgaccctcgccaaggcggtctacgatgaacctcgagcaaaggacaaattccgccaccgtgcgtgggtcgccgccggtggctcgccggagatcagggggatcctccgtgatgtcctccagcaagtgcgtcccgacgatgccatggatgtggacggccagcgtcttgaagcttcgttcaaagactacctcaaggacaagaggtatttaattgtgatagatgacattgggatggatcaatggagcatcatcaggtcagcctttgaagacaatggaacaagcagtagaataatacttaccacaacaattcagtcagtagctaatatgtgggcggacccagaaatgggccaaggcccgggccgctccatggaaatttcagcccaacgcaaagtttacatggtaaaaggaggtccaatagactttttcctggttaaaaaacatacttctctaatgggcctcccatcccaggccccgggccgtggaccagcttgcccggggtctgggtccgccccgtgcagccatggcagtggttatgtgtaccaaatgaacaccctgggtgaagacgactccaaaaaactagcttttccagggtttagatcacctgaattggagcaaggttcagcatccttattagggaaatgtgatggtcttcctcttgctctggtcagtgtctctgattacctgaagagttcaagtgagcccacaggagagctttgtgctaaattatgccgtactctgggctctcatctgaaagagaagcatggccatgacaacttttctgaactcaggaaggtgcttcttgacaactatgacagtttatctggctatgctctgagttgcttgctgtaccttggtatattcccaagcaatcgtcctctgaagaagaaagttgtaatcaggcggtggttagctgaaggatatgcaagaagtgattctcttcgcagcgaagaggacattgccgatgagaatttcagtaagcttattgaccggcatatcattcagcctattgacacaagaaacaattctgaagtaaagacgtgcaaaactcacggaattatgcatgaatttttgctgaacaagtccttgacccagagattcatcgcgacatcatctcatgatcatccaagacttggaatcaatactaccaatgcacgccacctttctgtccatgctggcgaactgagagaatgcgtcacatctgatgaagaattatctcgtgtccgatctctgacaatctttggggatgcaagtgatgcaatttcatattttcgcaagtgcaagctgatacgaatcttggatctacaagaatggaacaatctagatgacgatcatctgaaacacatatgcaaactgtggcatctgaaatacctgagctttgggggcaatatcagtgagcttccgaggagcattgaaggacttcattgtttagagacactggatttaaggagaaccgagataaagtttttgcccattgaagcaatcatgctgccccacttagctcacctttttggaaagtttatgcttcagtgtttagagacactggatttaaggagaaccgagataaagtttttgcccattgaagcaatcatgcttccccacttagctcacctatttggaaagtttatgcttcataaagatgatctgaagaatgtgaacaagagtaaactacaaaaattcttctcttcaaataagagcaacctgcgaactttagcaggatttatcactgacgagggcaaaggatttctgcaacttgttggtcatatgaaaaaactgaggaaggttaaggtatggtgcaagcatgttgcaggtagcagtaattacatcgctgatctttcacgggccattcaggaattcacgaggactccgattgacagggatagtgaccgttctctctcacttgattgtgaagaatgttctgaaaattttctgagctcaattgatttggagccatgctctgaagattccaaataccatctaaggtcactaaagctacatggcaagttactccggttacctccatttgttacttcgctgtcaggtctcactgagctgtgcatttcatcagctatactgacacaagatcatctgtcagcactaatcaaactgaacagacttctttacctcaaactgatcgcagacaagcttgaaaatattgaaataaaaattggggcattcccaagcctgcgacgcctgtgctttgtcatgaaaattatgacttcagctctaacaacaattgaacaaggggctctatcgaacctcgtctcgcttcagctgctctgtcaaggtctagttggtctttccggcattgagatcagacacctgaaacatcttaaggaaatcaccatcgactctgcagtgactgtacaaacaagacaagattgggaacaggcagcaaagaaccacccaaacaggccaagagttctgttgttcagaaaggttgatccgatggaaagcgaggagcctgaaaaaccttgtgccataggggaaaagaggaaactttctgtagcccagccaacaggttcagatggtggactggattctagccttaagaagatgagactttcagagccttcttcttctcggcttcaggtgatcgttcatccggtggtagtaacagccactgaggcagcaccccagcattcgtttgcgaatctctag</cdnaseq>

Protein Sequence

<aaseq>MSMESAAATAFLKTVMGRLFMALEKEYNKHRGLAQESHSLQQDL RMIAAAMDDQQLSMGRSDAAARTAVARLYTEEMLDLAHDIEDCVDRFLHRLTCNHHKR GGAGAGASLLRRVTHELSKVKSRSSFGDEIQKLKKRLREAHQRVLTINPPPILIAGGS SSSAAVAPPCRAARSPVGIGEDVEELLSMLDEVEGEPVQMRVISVVGFGGLGKTTLAK AVYDEPRAKDKFRHRAWVAAGGSPEIRGILRDVLQQVRPDDAMDVDGQRLEASFKDYL KDKRYLIVIDDIGMDQWSIIRSAFEDNGTSSRIILTTTIQSVANMWADPEMGQGPGRS MEISAQRKVYMVKGGPIDFFLVKKHTSLMGLPSQAPGRGPACPGSGSAPCSHGSGYVY QMNTLGEDDSKKLAFPGFRSPELEQGSASLLGKCDGLPLALVSVSDYLKSSSEPTGEL CAKLCRTLGSHLKEKHGHDNFSELRKVLLDNYDSLSGYALSCLLYLGIFPSNRPLKKK VVIRRWLAEGYARSDSLRSEEDIADENFSKLIDRHIIQPIDTRNNSEVKTCKTHGIMH EFLLNKSLTQRFIATSSHDHPRLGINTTNARHLSVHAGELRECVTSDEELSRVRSLTI FGDASDAISYFRKCKLIRILDLQEWNNLDDDHLKHICKLWHLKYLSFGGNISELPRSI EGLHCLETLDLRRTEIKFLPIEAIMLPHLAHLFGKFMLQCLETLDLRRTEIKFLPIEA IMLPHLAHLFGKFMLHKDDLKNVNKSKLQKFFSSNKSNLRTLAGFITDEGKGFLQLVG HMKKLRKVKVWCKHVAGSSNYIADLSRAIQEFTRTPIDRDSDRSLSLDCEECSENFLS SIDLEPCSEDSKYHLRSLKLHGKLLRLPPFVTSLSGLTELCISSAILTQDHLSALIKL NRLLYLKLIADKLENIEIKIGAFPSLRRLCFVMKIMTSALTTIEQGALSNLVSLQLLC QGLVGLSGIEIRHLKHLKEITIDSAVTVQTRQDWEQAAKNHPNRPRVLLFRKVDPMES EEPEKPCAIGEKRKLSVAQPTGSDGGLDSSLKKMRLSEPSSSRLQVIVHPVVVTATEA APQHSFANL</aaseq>

Gene Sequence

<dnaseqindica>60..898#1146..3600#gaggatgcaaggcttgcagagcagctgcccaagctgctgctgctgctcatccttggcacatgtccatggagtccgcggcggcgaccgcattcttgaagacagtcatggggaggctgttcatggcgctggagaaagagtacaacaagcacagaggcctcgcgcaagaaagccactccctgcagcaagacctccgcatgatcgccgccgccatggacgaccagcagctttccatggggaggagcgacgccgccgcacgcacggccgtcgcgcggctgtacaccgaggagatgctcgacctcgcgcacgacatcgaggactgcgtcgaccgcttcttgcaccgcctcacctgcaaccaccacaaacgcggcggcgccggcgccggagcatcgctgctgcgccgggtcacgcacgagctcagcaaggtcaagagccgctcgagcttcggcgacgagatccagaagctcaagaaacgcctcagggaagcgcaccagcgagtcctcaccatcaatccgccgcctattctcatcgctggtgggtcgtcgtcatcggcggcggtcgcgccgccgtgtcgggcagcgcgcagcccggtgggcatcggggaggacgtcgaagagctcctctcgatgctggacgaggtggagggcgagccggtgcagatgcgagtgatctccgtcgtggggttcggtgggttggggaagacgaccctcgccaaggcggtctacgatgaacctcgagcaaaggacaaattccgccaccgtgcgtgggtcgccgccggtggctcgccggagatcagggggatcctccgtgatgtcctccagcaagtgcgtcccgacgatgccatggatgtggacggccagcgtcttgaagcttcgttcaaagactacctcaaggacaagaggtgactgcaaagaattctaattttcaagaacccaaataaatacttccatgaaattttcttgttttaattagttattccagtgatccaaatgattattgacaaaaattttttttaatatttactgcacttctgctcctcatttctcaatttgatcgtcatgcagcatatactgactattgtcaatttttacattagtagaatatgtgttttactaaatttgtttctcaattctcaatctggttattaggtatttaattgtgatagatgacattgggatggatcaatggagcatcatcaggtcagcctttgaagacaatggaacaagcagtagaataatacttaccacaacaattcagtcagtagctaatatgtgggcggacccagaaatgggccaaggcccgggccgctccatggaaatttcagcccaacgcaaagtttacatggtaaaaggaggtccaatagactttttcctggttaaaaaacatacttctctaatgggcctcccatcccaggccccgggccgtggaccagcttgcccggggtctgggtccgccccgtgcagccatggcagtggttatgtgtaccaaatgaacaccctgggtgaagacgactccaaaaaactagcttttccagggtttagatcacctgaattggagcaaggttcagcatccttattagggaaatgtgatggtcttcctcttgctctggtcagtgtctctgattacctgaagagttcaagtgagcccacaggagagctttgtgctaaattatgccgtactctgggctctcatctgaaagagaagcatggccatgacaacttttctgaactcaggaaggtgcttcttgacaactatgacagtttatctggctatgctctgagttgcttgctgtaccttggtatattcccaagcaatcgtcctctgaagaagaaagttgtaatcaggcggtggttagctgaaggatatgcaagaagtgattctcttcgcagcgaagaggacattgccgatgagaatttcagtaagcttattgaccggcatatcattcagcctattgacacaagaaacaattctgaagtaaagacgtgcaaaactcacggaattatgcatgaatttttgctgaacaagtccttgacccagagattcatcgcgacatcatctcatgatcatccaagacttggaatcaatactaccaatgcacgccacctttctgtccatgctggcgaactgagagaatgcgtcacatctgatgaagaattatctcgtgtccgatctctgacaatctttggggatgcaagtgatgcaatttcatattttcgcaagtgcaagctgatacgaatcttggatctacaagaatggaacaatctagatgacgatcatctgaaacacatatgcaaactgtggcatctgaaatacctgagctttgggggcaatatcagtgagcttccgaggagcattgaaggacttcattgtttagagacactggatttaaggagaaccgagataaagtttttgcccattgaagcaatcatgctgccccacttagctcacctttttggaaagtttatgcttcagtgtttagagacactggatttaaggagaaccgagataaagtttttgcccattgaagcaatcatgcttccccacttagctcacctatttggaaagtttatgcttcataaagatgatctgaagaatgtgaacaagagtaaactacaaaaattcttctcttcaaataagagcaacctgcgaactttagcaggatttatcactgacgagggcaaaggatttctgcaacttgttggtcatatgaaaaaactgaggaaggttaaggtatggtgcaagcatgttgcaggtagcagtaattacatcgctgatctttcacgggccattcaggaattcacgaggactccgattgacagggatagtgaccgttctctctcacttgattgtgaagaatgttctgaaaattttctgagctcaattgatttggagccatgctctgaagattccaaataccatctaaggtcactaaagctacatggcaagttactccggttacctccatttgttacttcgctgtcaggtctcactgagctgtgcatttcatcagctatactgacacaagatcatctgtcagcactaatcaaactgaacagacttctttacctcaaactgatcgcagacaagcttgaaaatattgaaataaaaattggggcattcccaagcctgcgacgcctgtgctttgtcatgaaaattatgacttcagctctaacaacaattgaacaaggggctctatcgaacctcgtctcgcttcagctgctctgtcaaggtctagttggtctttccggcattgagatcagacacctgaaacatcttaaggaaatcaccatcgactctgcagtgactgtacaaacaagacaagattgggaacaggcagcaaagaaccacccaaacaggccaagagttctgttgttcagaaaggttgatccgatggaaagcgaggagcctgaaaaaccttgtgccataggggaaaagaggaaactttctgtagcccagccaacaggttcagatggtggactggattctagccttaagaagatgagactttcagagccttcttcttctcggcttcaggtgatcgttcatccggtggtagtaacagccactgaggcagcaccccagcattcgtttgcgaatctctagcacatatattcaactgcagcagactgcaataaaatacaattcaaaatttgcaagaaaagcttagcaatctttatttctgttcagtacatctgttagacagttacatggtccagatttctgtctttccctacttgttgtgtacttcctacagttactgtttagctacattagtgtggaactttacgtgcctagagctttgaaaatgctttgttttcgttgaaatgagttgttgtctgtaagtctattggaaagaagtgaatgccaggaagtgaatttgtccaaaagtcgccgaaggctgtatgttcaggcctcagggtctaaattgaccttgttttgtgtaagtttagggtgttcaataatgtaactttaggggataatttggggatttttcactgtactttgatccagccctaaagggcaagtataaatgtgtacaagagatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0686500, RefSeq:Os11g0686500