Os11g0704600

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0704600| Description = Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39)| Version = NM_001075077.2 GI:297612467 GeneID:4351214| Length ...")
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Gene Name

Os11g0704600

Description

Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39)

Version

NM_001075077.2 GI:297612467 GeneID:4351214

Length

3915 bp

Definition

Oryza sativa Japonica Group Os11g0704600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30647452..30651366

Sequence Coding Region

30647760..30647788,30647950..30648253,30650133..30651218

Expression

GEO Profiles:Os11g0704600

Genome Context

<gbrowseImage1> name=NC_008404:30647452..30651366 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30647452..30651366 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaaaccttcacccaccaatgatgaagatgctcctcgccgccctcgtcgtcgtcgccgccgcctccttcagggcggccgaggcggcgctcccgtcgatggcggtgggcgtcaactacggcgccaacgccgacaacctccctccgcccaaggacgtggcggccttcctcgccgcgcacaccaccatcgaccgcgtgaagctgttcgacgccaacccggccttcatctccgccttcgccaacacacccatctccctcgccgtctccctccccaactccgacctcccttccctcgccgacaagcagaccggcctcgacaccgcccgcgcctgggtccgcgccaacctctccccctacgtccccgccaccaacgtcaccctcctcctcgccggcaacgagatcctcctctcccctgaccccaacctcgtcctctccctcctccccgccatgcgccgcctcgcccaggccctccgcctcgagggcctcaccggagtccgcgtcaccaccccgcactacctcggcatcctcgccccctccgacggcatcccatccaacgcccgcttccgcccgggctacgacaccaagctcttccctcccatgctccagttccaccgcgacacgggctcccccttcatggtcaacccctacccctacttcagctacaacaatcagacgctggactacgccctcttccgccccaaccgcggcgtttacgaccccaacaccaagctcaactacacctccatgttcgacgcccagatggacgccatctacaccgccatgaagcgcctcggctacggcgacgtcgacatcgccgtcggggaggccgggtggcccacgcaggcggacccagggcaggtgggcgtcggcgtggaggaggccagggacttcaacgaggggatgctccgcgtcgtcagcagcggcaagggcaccccgctcatgcccaaccgcaagttcgagacctacatcttctccctcttcgacgagaaccagaagcccggacccatcgccgagaagcacttcggcatcctcaacccggatttcacccccatctacgacctcggcctcctccgccaatcctccgattctggagctccaaacccttcgccgaatccatcacctaaccctagtccgaaacccgctccttctggtggagggaagtggtgtgtccctaaggctggtgcgagtgatactgacttgcagaacaacattaactatgcctgtggctatgtggactgtaagccgatacaaagtggtggcgcatgctttgatccgaacaacgtgcagtcccatgctgcatttgtgatgaatgccttctaccaggccaacgggcggcacgactacgattgcgacttcaagggcaccggcgcggtcacctccaatgaccctagctacgggagctgcaaatacgtctcctga</cdnaseq>

Protein Sequence

<aaseq>MRNLHPPMMKMLLAALVVVAAASFRAAEAALPSMAVGVNYGANA DNLPPPKDVAAFLAAHTTIDRVKLFDANPAFISAFANTPISLAVSLPNSDLPSLADKQ TGLDTARAWVRANLSPYVPATNVTLLLAGNEILLSPDPNLVLSLLPAMRRLAQALRLE GLTGVRVTTPHYLGILAPSDGIPSNARFRPGYDTKLFPPMLQFHRDTGSPFMVNPYPY FSYNNQTLDYALFRPNRGVYDPNTKLNYTSMFDAQMDAIYTAMKRLGYGDVDIAVGEA GWPTQADPGQVGVGVEEARDFNEGMLRVVSSGKGTPLMPNRKFETYIFSLFDENQKPG PIAEKHFGILNPDFTPIYDLGLLRQSSDSGAPNPSPNPSPNPSPKPAPSGGGKWCVPK AGASDTDLQNNINYACGYVDCKPIQSGGACFDPNNVQSHAAFVMNAFYQANGRHDYDC DFKGTGAVTSNDPSYGSCKYVS</aaseq>

Gene Sequence

<dnaseqindica>3579..3607#3114..3417#149..1234#atcaggaggtcaataggagagaagaggagcgtcgtcgagtttgaaatctcaactcgcaaacccccacactactttttcttcgtctattatatcccaacacaacacaaggtgaagctactcctaggcgagagaatctgagagagatgagatgagaaaccttcacccaccaatgatgaagatgctcctcgccgccctcgtcgtcgtcgccgccgcctccttcagggcggccgaggcggcgctcccgtcgatggcggtgggcgtcaactacggcgccaacgccgacaacctccctccgcccaaggacgtggcggccttcctcgccgcgcacaccaccatcgaccgcgtgaagctgttcgacgccaacccggccttcatctccgccttcgccaacacacccatctccctcgccgtctccctccccaactccgacctcccttccctcgccgacaagcagaccggcctcgacaccgcccgcgcctgggtccgcgccaacctctccccctacgtccccgccaccaacgtcaccctcctcctcgccggcaacgagatcctcctctcccctgaccccaacctcgtcctctccctcctccccgccatgcgccgcctcgcccaggccctccgcctcgagggcctcaccggagtccgcgtcaccaccccgcactacctcggcatcctcgccccctccgacggcatcccatccaacgcccgcttccgcccgggctacgacaccaagctcttccctcccatgctccagttccaccgcgacacgggctcccccttcatggtcaacccctacccctacttcagctacaacaatcagacgctggactacgccctcttccgccccaaccgcggcgtttacgaccccaacaccaagctcaactacacctccatgttcgacgcccagatggacgccatctacaccgccatgaagcgcctcggctacggcgacgtcgacatcgccgtcggggaggccgggtggcccacgcaggcggacccagggcaggtgggcgtcggcgtggaggaggccagggacttcaacgaggggatgctccgcgtcgtcagcagcggcaagggcaccccgctcatgcccaaccgcaagttcgagacctacatcttctccctcttcgacgagaaccagaagcccggacccatcgccgagaagcacttcggcatcctcaacccggatttcacccccatctacgacctcggcctcctccgccaatcctccgatgtaagtaatttttcattccccatcttcatttcttttcttttcatttggttggttttagctagctagtgtaattaattaccctgagatagatgcagattaatagaaaaaaaaacattggtggtacttattttcagtacatatatgcctgtcattgggagattgattagcctgcatcttatgccaaagattgcattatttaatcaccggggattattcatttcttcttcaggggagaaagaaatgaaagaataattagtactaacagatagattcgcatagctgtagcaaaccaatttttagtatttaactcatgtcaggacgttgatagggcaatcgatatgtacacgcacgctttgctgatctaagctggtcctcgcttccgtgcgaccgtgaccatgcggatattggtggtactagctaagtttggttgttcacaccgcattgtcaaaggtgtagccatggggttatggcccaacctgacctctctggaaagacctgtttccggttcaacttttgctccttatcgcatcgatgatctgtttgcccaggctgcttttctcgatgaatccaggggcggtagcccgcccatgtggtgaagccttggacacgtctgcattttttatacatgctattgggacagccgcaggcctctgattaagatctaagatgcacatgcttctatcgatggctgggcatttctcaacttttacatagtactattcactactcacctaccatgtcatcgaataattacaacttctgttcagtaaactaacaggttcaattgtgctctgttctttctgaatgctacactgacttatgggtttagttagtacatttttcttttaggattttgtgatggaccaaataaccaagagaatggtaggagtacaatatagtaaatatgatgacttacactaatttactatccacatagagatactagtgcttttgagatacataggacaacctagtgcatagtactgcatcagcttttgctgaaagcatcaagtcttgttctgtgggctgtgtagcttagcttctgccttctattgctgaatacagactgtttggtatcccttctttgtagtttgctggattttaagaaactaatgtggtctggtgcttctacgaagctaccttgaagcaaaaagggaattaacatgccctctgcctttcgtttcatgctcaattaaaaacaaactcaaaaggtaggacagtcagtccacactggcaacatataaggtgccattgcacatggagcttgctggttggagcagtgtgccagtgtcgtttccaactttgcttcatctggtgtcacctctatctatccatcccatgatatccacgtgtccatgtgtttgttatttttgatcatttgagccttgctatttctctgttctacttgagctatactgtgtgtccgtatggatcagcttcgctgaccgaagtttgatgcagccaataatgctagttagcctttggtgatgcttagtgaaagtagtggactatggagaatatgggggctatctaactggatcaatttagcgagccaagaatcttaggcaaacaatcatcgatttggacgaggaaacaaaccctgtcttggatggtgccaatgcagaatgcagaaaacatgtatttgctgtcaagtgtatcagtagcatactaacatgtacacacaacaatttagtctcagtctattgcaggcaaactaattttgttgaagagtatgttctaaactggatttacaatgctgtttaccctagtccgcagttttgtggagttactgttttcctgtttaggcactgtggtgcttgaattcttttcctttatcaccttacttatttgatgaaaccaatgctttcctacgttgcagtctggagctccaaacccttcgccgaatccatcacctaaccctagtccgaaacccgctccttctggtggagggaagtggtgtgtccctaaggctggtgcgagtgatactgacttgcagaacaacattaactatgcctgtggctatgtggactgtaagccgatacaaagtggtggcgcatgctttgatccgaacaacgtgcagtcccatgctgcatttgtgatgaatgccttctaccaggccaacgggcggcacgactacgattgcgacttcaagggcaccggcgcggtcacctccaatgaccctagtaagttgaaacaactgtttctcgttcatgttctgcacctagcagcattacacattactagactgtcaaatacacttattcagaaagaaagacctgctatgtttttgaacatggtagtagttgatcatttgaactgaaaccgatacatgcttgttcggcaggctacgggagctgcaaatacgtctcctgacgggacgcagcaagccatggcagtgcaggtgcagcggcaccaacctcgagtctacctccaggcttaagtcacggaagcgctggagggttgctaatactgcctggcttgcgcctaatttttctctgctcttgtctgacagcagccatgcttctttcttagaagagctatactattcattactctcgtagcaccggggaatgaacctattaaaattgtgtatccgttatcagtcaattcttgctcatgtttggctataccgcagttttctcattgtgtagtgaaatcatttgtgcttaacttatcattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0704600, RefSeq:Os11g0704600