Os12g0102200

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0102200| Description = Similar to Tonneau 1b| Version = NM_001071767.1 GI:115486855 GeneID:4351242| Length = 3070 bp| Definition = Oryza s...")
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Gene Name

Os12g0102200

Description

Similar to Tonneau 1b

Version

NM_001071767.1 GI:115486855 GeneID:4351242

Length

3070 bp

Definition

Oryza sativa Japonica Group Os12g0102200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:95736..98805

Sequence Coding Region

95823..95909,96449..96581,96899..96987,97088..97210,97980..98119
,98207..98232,98310..98466,98548..98572

Expression

GEO Profiles:Os12g0102200

Genome Context

<gbrowseImage1> name=NC_008405:95736..98805 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:95736..98805 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgactacgcgcgggagatgatggagctcaagacgctcgtcacccgcaccctcgagaagaagggcgtcctcgccaagatcagggctgagctaagagcaagtgtgttcgaggccatagaagaggaggatagggtagtggagaatgatgatggtgggaatcccgctttgcttggtagctgcaatgaccgagctaagcagctgcatgcttcaccatcaggtaggttattaacagcacttgtaagtgaatacttggagtgggcccagctaagtcacacgatgaaagtttatctgcctgaatgtaatctgccaaaggacttctggaagaatgaattaaaggatttttctaacaaaagcggagctgaagggagcaggagtgctgaaagtggccccatgcttctagatgttcttgaaggatatctcaaatatgagaatttgtctcaaacaaggatggctggtactggtaggagaataatcaattccgagtcggatccggctctaaatgctgaacataggaacacgaggaggccaccgtcgtcttcttcagttacaggcttgcctcctatgggaaggccaatgccatcgtcacagatgtcagaccgaagaggggggtcttcggcttccaatgcaaggaaggatgaatacaactggagatatgatgctgatgatatctctgaagaagtgttgcgagcatcaagtgctctagaaaacgtccagctagaccggaaagctcgcaatctgacgacttcttggaggcatccaggcgacggtgctgagtaa</cdnaseq>

Protein Sequence

<aaseq>MDDYAREMMELKTLVTRTLEKKGVLAKIRAELRASVFEAIEEED RVVENDDGGNPALLGSCNDRAKQLHASPSGRLLTALVSEYLEWAQLSHTMKVYLPECN LPKDFWKNELKDFSNKSGAEGSRSAESGPMLLDVLEGYLKYENLSQTRMAGTGRRIIN SESDPALNAEHRNTRRPPSSSSVTGLPPMGRPMPSSQMSDRRGGSSASNARKDEYNWR YDADDISEEVLRASSALENVQLDRKARNLTTSWRHPGDGAE</aaseq>

Gene Sequence

<dnaseqindica>88..174#714..846#1164..1252#1353..1475#2245..2384#2472..2497#2575..2731#2813..2837#ctctctctctctctctcttctccggctccggcgccgcctcccctcgttttccgagagagagagagagagaggcaggcggaaggggggatggacgactacgcgcgggagatgatggagctcaagacgctcgtcacccgcaccctcgagaagaagggcgtcctcgccaagatcagggtacaaatcccccatccctcttcttctcttctcttgctcacctttctgcggatctgactcactacttgcggatctcaatctccggcccgccggaattgcttctcttcactgtttattgcttcctctcaccttcgacttccatgcgccgcacttgttgaaggaattttctcgtcttgacaaagtctactgctctatttaggtttcaatttgttaaacaaaaagggatctcacgcttgccctacttttgtttgcattgtcaattagagtgcaaaatgttgatctacacacatgccattcctcgtgtgccaagattctagacatctgctatttaatttttttgttaaatctatgtccgaaatttagataatagtattatccttgaggaaggaagtggatagctctacttttcctcatctgttgaagccaggttataaagccatgtgctctcttcagtttcaagaaccattacattacattacatacgaaaaccctcctattaccataaggcgtgatcttgtcttgcactcttgcttgagtaggctgagctaagagcaagtgtgttcgaggccatagaagaggaggatagggtagtggagaatgatgatggtgggaatcccgctttgcttggtagctgcaatgaccgagctaagcagctgcatgcttcaccatcaggtttgccttcttttctacccagaagttcagattgtttcccatgctgcttcaaaaataatttatctcatatgtatgattctctagattccttttttggagatttgttttcataccattctgtgaatttgcagcttgccaaaatgccaccattgtgccaaagtagcatctttattcgcttcatctttctcttctacgcttatgaaagaaccttttttctatcctgctgatgattagttagtctttgcctttcatttctgctgcatagtttcttcttcggttataattgatttacgtcgaacattttctactgctctcaggtaggttattaacagcacttgtaagtgaatacttggagtgggcccagctaagtcacacgatgaaagtttatctgcctgaatgtaatctggtaacagtttgccatatctcataaatcttggatggatatgtccaaaatcaacatctgctaatgctgctattgattgttggctgttgcatttgtaaatcagccaaaggacttctggaagaatgaattaaaggatttttctaacaaaagcggagctgaagggagcaggagtgctgaaagtggccccatgcttctagatgttcttgaaggatatctcaaatatgaggtactcttgctaactcagagtctcaggcagacagtatataaatgtatatggaaatctttctgtttatggaattttgatttgattaaaatccctgtgttgcaacaggattttaattaaagaaaattattattaacccattattaccatcatttcctgcatacttttttcttttaataaaatgtaaggaattggtaatggaggtggttgacatgtggaccctttggtcctacttgacctttttctttttcaaatagtagagagttggtggtgggaggggtggcagattcaccactcaccaccaccactactctcttttataagagtaagtaaagatatccacatttttctttcgctgttcttgagcccatgaattagctatcaacacttctattagtgatactagtaaaatgtccttgtgttgcatagatttcaactagctatactatgtataaaatataaaatacaatagataaataattatcgctaaaacttattcacttgattaaatgagacgaaatgagcacctatgtatacttgtatacagatatacaatacttttctatggaatttctacaaataatacacacaaggctacatattttttaaccacgaaaaatctagagtgaggtgggtgtagaacctatcataaccccaaactctctgtttctcttactcttctaaaagaaaatgcatttttacatatcttagttttaatctttatttgcttatattgcctgattttggttacttgaattgctacattgagcagaatttgtctcaaacaaggatggctggtactggtaggagaataatcaattccgagtcggatccggctctaaatgctgaacataggaacacgaggaggccaccgtcgtcttcttcagttacaggcttgcctcctatgggaaggtaacagcttactactattcagctattcaatttgcagatatttgttgtttcctcaaaacacaggtaacatttccttgcaactcgcaggccaatgccatcgtcacagatgtcaggtaaattataatttttttctcggtttgtttattttatgctagagtgctcctctaaagctagcgctttggacattcagaccgaagaggggggtcttcggcttccaatgcaaggaaggatgaatacaactggagatatgatgctgatgatatctctgaagaagtgttgcgagcatcaagtgctctagaaaacgtccagctagaccggaaagctcgcaatctgacgacttcttggaggttggaactattgcctttcttctttgcaccttccctttttgcctggccatttgtttctgatcatagaatatctgtttccaggcatccaggcgacggtgctgagtaaaatcggaaggtgggatgggtccaattcaccattgcgctgcttggacccccttgggccatttgtatcgttttggttgctgcggtgggattgtgcgcttgcgtagaagaatgctcagtgttgatcatgcctactgtactcctagctcatttgtttatgcaccatatatgggatttgatttctgctggacaatcttgttcttgtgcgtataattttagttgcgtgtagtttctaac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0102200, RefSeq:Os12g0102200