Os12g0105375

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0105375| Description = Conserved hypothetical protein| Version = NM_001189819.1 GI:297728768 GeneID:9269069| Length = 8265 bp| Definition ...")
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Gene Name

Os12g0105375

Description

Conserved hypothetical protein

Version

NM_001189819.1 GI:297728768 GeneID:9269069

Length

8265 bp

Definition

Oryza sativa Japonica Group Os12g0105375, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:272675..280939

Sequence Coding Region

272848..272943,274026..274169,274264..274482

Expression

GEO Profiles:Os12g0105375

Genome Context

<gbrowseImage1> name=NC_008405:272675..280939 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:272675..280939 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttcctcagagtaagataataaatatcttgtcaagtccaattatctttagcaagcataagcatttgatgtttaattggactaacaagtatcatacttatgtcagagtggagcagagtgtttatgcgctacttcgtactagagacatggccatatcacgctacagggagtatggaataccggtggattggctgtctgattccggggtagttggcaagatcaaattggcatctgttcagctggcgaagaagtatatgaatagggttgccacagagctagatgccttgcaaggcaccgagaaagagcccaacagagagttcttgcttcttcagggtgtgagatttgctttccgagttcatcagtttgccggaggctttgacgaggaaagcatgaaggcgtttgaagagctaagaagcaagatgtgtacaacacagacatctgctccacaaatttcatag</cdnaseq>

Protein Sequence

<aaseq>MVPQSKIINILSSPIIFSKHKHLMFNWTNKYHTYVRVEQSVYAL LRTRDMAISRYREYGIPVDWLSDSGVVGKIKLASVQLAKKYMNRVATELDALQGTEKE PNREFLLLQGVRFAFRVHQFAGGFDEESMKAFEELRSKMCTTQTSAPQIS</aaseq>

Gene Sequence

<dnaseqindica>7997..8092#6771..6914#6458..6676#agtttctgatgagccaagggagctctgtgcgtcgtcagctctcctgcccgggacagtgatgagggcaaggagccatgcttgtcaggttaggcgtcgttgttgtagcctccgtcgcagctttaactcttaagagagccaacagtggcaacagaggtactatacttgcttctctcttgcagtggcacttccttccttaatttgttcctctgaatttctcactgaagctcttgttgaacttcaacagatggccaagcaaggaaaggaaaggataaaactcgctactctgaacatgtaagtgcatgccattctctactagcttagaacttgtgagtttaactgtaactgttctgaacacgtatgcgtttaactgttcttttcaattgctgtggttcagggggagaaagaagaagagaaggaagaggttaaaacaatcagcggcataatcaattcagctctttcagatgatgacgacatgctctccgagatcgagagcctcctatcaggggagattgacatccccctaccaagtgacaggttcgacgtcaaagaacgctctcggtacaacagtgttaactccgagctggagaggctgcgtggacttgtgcgtgagctggaggagagggaagtgaagcttgagggagagctgctagagtactatggcctcaaggaacaggagactgatgttgtagagctacacagacagctcaagatcaagatggtggagatcgacatgctcaaaatgaccatcaactcgctgcaagaggagaggaagaagctgcaggatgacgtcgcccgtggcacaggagccaagagggagctggaggctgcgaggaacaagatcaaggagctgcagcgacagatacagatggaggcgaaccagacaaaagggcagctgttgcttctaaagaaccaggtgattgcgctgaagtccaaggaggaggaggcagccatcaaggacgcagaggtgcagaggaagctgaagaagctcaaggagctggaagtggaggtagttgagctgaggaggaagaacaaggagcttttgtatgagaaaagggatctcatcgtaaagctggatgcagcacaaggaaaaataacagaggtatgatattagtatcattttcactcagcaattatatgcttctaaagcctcacatttgcgtggcatcatttgcagcagcaacagttgtttttaatgttgacatatttttttcatgatttatgtggcatgcagacagctggttgctgtcctacattttcacattaagaaaaataggcacaaaatgataggctttatttttttttcttcttcttttaattttcccttgggattccatcaatcaatttcatgacaaggactcagaatttagactttcctctcacattatcaacactgaatatatttttttttgagggaaacgacggcaggagagctgccggaatttaattgataggagaaaaaaaaaaaacttacagtcccagaaacaaaaaggaaatcaaggaggactaaaagcagtcctccgcaaatctaggtcctgcttaacaaagtatgctacttggaacgaagtacaagtggtattgtgaaaaattctcctatttctttcaagccaaacattccaccaagtggttaacaaaactcctctaatatcctgcttttggattgctgagccttgtcgattgatatcctcccaccaagaagcgatcccagccggctgtgaattagaaactagcaaattatgccaactgtgaactagtgcccaaacttctttaaaaaaggagcattcgcaaaaaagatgattagtgtcctcaaaggcatcggtgcaaagacagcagatccaattgcaaggccaatgtctctgaaggaggttctgagccgttagagttttgtggtgaagaataagccatcccaaagacctcattttaggttcagctggcgccttccaaagagagacaaaatccaaacgagtgaaagaaccttcaaattggtaagaatatgcacttttacttgagtagcaacctgcggagttccaattccaggttatatcgtcggcactttgtgatagatgaaaatcttgaagcatgcctcccagccgcacgaggtcgtggatctcttcgattgacgagaattgcctgaaggagagaatccagttgtttgatgaaacctctaactgaacatttctttgtttcctttttgctagctgaaaacaaagaggggcaatatctttagggcagcagccttgaagccaatgatcatgccaaaaacttgtttttgctccgtcgcccactgcgatcgtagttgctgcttggaacaaccttttatcgatatcatcacaaggcagattcataccagcccagggtttgtcctcgtctttccatttaagccacagccattgagacggagagctctagaaaatttttccaaatcaaggagtcccaatccccccaaagattttggtctgcacactgtctgccagtttaccaaacagctgcctgggtttgaatggtctgggtcctcgcccttccagaggaaagatcttcgaaacctatcaattctcttgaaaacccactttggcatttggagggccgaaagatggtggattggcattgagctaagaaccgtttttaccagggtttcgcgacccgaagaggagaaaaaccttcctttccaagtagggagtcgtgaaccaattttctcaattaaggggagaaaatcaattttcctcaattttcggtagtggagtggcaatccaagataacgacagggaaaggacttaattgtgcctgggaagatttgcaacaaaggagctagatcaattccttcacatctaataggaaaaatttcagttttggcaacatttgtgtggaggcctaaaacttgcgcgaagaaatttagaagctttgaaagggtggtgagctctgtcgcatctggtcttgtgaaaacagctacatcatcagcatataaagagcaacggaacctgttgcggttactctctaacggagaaaggatggaagcaccttcggccgctttaagaatccagtggaagggttccatggcgagaataaagagcattggtgacagaggatcgccctgacgaagacccctcgcatgaggaattggttgtcccggtgcaccattgagaaggacctgggacgaagaggtggcaaaaaggttgcagatccaattgagccaacggttgccaaagccgaactgtcgaagaacatcaaggaggtaaggccagcacaccatatcgaaagctttggcaatatcaactttaatgaacaaactctgttttcttgtcctgtgtaagcgctgaaccaagttttgaacaaaaatgaaattatcatgaattgctctttttcgcacaaaagcattttgattttgagagatcatctcgtttagtctcagtgcaagacgatttgctaacactttggtgattatcttggtaaaactgtgtacgaggctaataggacgaaaatgatcagcacctgaagcgtcatctttctttggcagcagaaagatgtaggccgaatttagctcctcaagatgtgaagtgcttaggttcatgaaggaagtcaccgctgctagaaggtcacctttgattatttcccaggcaactttgaaaaaagctccaatgaaaccatccggacctggagccttttcgggaggcatgccaaaaatcgttcctctaagttcctcttccgagatgtcttcctctagctcggacagattaaaagaaggcagttgcaaattggtccaattcagattcttcgtcctttgaaaatttgtccccaatttctcactatagaatctaaacaactcatcttctttatccttggctgaaactgctaagcctgatggagttttcagtgattggatgaagttctttctcctccttgaggttgcttttatatggaagaacttggaatttacatcaccctccttaatccatgttaacctagaacgttgcctgatctttaacttattcagaaccgagaggcccaaaatacgtgctttgaggtttgagtatagctgccgctcatcattggttaaaactcttgactcctgtgccacgtcaagttgaaagacaacttccatcgccactgcaagctgtagcgtaatatcccccacctgactgcgattccatctcttaagatcacgggcaagacgacgaagttttaggctgaaagtagcgagacagttcgtggctagtatcggcttgttccaagattcttgcacaacatctaggaaacctggaattcttaaccaatatgcctcaaatctaaaactgggtggtctacctcttttgtcattaccgattaggaaaagaggagcatgatctgagcatgctgaagagagagggtaaaggattgaaccgctgaatattatccattggactagacttgcacacactagcattggtttaactgaaaaatcccttgcctattcaataatgcatagctatattaagagctaaacttatatttcaaaaccacatcataatttcacactgcttctctcagaaaaggaagaatgaactagcaatagatatttttattatgttcattttcagcatatacagatatattaataacagagcttatcattgtgcagagtgatgtagtttcccatgcaagagaggagatcaacaagctgaggcatgcaaatgaagaccttaccaagcaagtagaaggcctacaaatgaacagattcagtgaagtagaagagttggtttacctgcgttgggttaatgcttgtctgagatatgagctccgcaactaccaggcaccgtctgagaaaatttctgctcgtgaccttaacaagaccctgagcccaaaatcgcgtgagagggccaaacttctaatgctggaatatgcaggatcagaacgaggacagggcgacactgaccttgaaactgcttcttctgcaccttcttcacccagaagcgaagacttcgacaacgtttcagttgacagttcttctagcagatacagcttctttggcaaaaggcccaatctgatgcaaaagctcaagaagtggggaaggggcaaggatgacggaagcagcttagcttcaccgacacagtccttcactagtgactccccaaagagcgccagccagaaaccaaaggggcccctagaggctctcatgctcagaaacgcaggagatggtatgggcattacaacctttggaaagagggaacaagatcccagtgatatcatggatgaggcaaatgttgcatcttcatttcatttgatgtcaaagactgtacaaggttttgctgatgacaagtatcccgcttacaaagataggcataaactcgccacagaacgggagaaggcaataaaagagaaggccgagaaagctagggtacaaagatatggcggtgtcaacagttcaggtattgtgccatctccaagatctgcactccctccaaaacttgctcaaataaaggaaaaggctcctacagctaatgctgaatccagtgaccaacctagtgataaccagaacaaccctctagttgtgacacaactgaaacttgcaaatattgagaagagagctccaagagttcctaggccacctcctgcaccatcagccactgccaacactgcaagtgcgttacctccaccaccgccacgcccgccaggtgcacctcctccaccaccgcctcctggcaaacctggtggcctttattccntttttaaaattcccccacaanattcctaaanaaaaaaatncccccatccanccnccatttcnccattccaatttcnccaactttttaaaaacccccatccnttccccccctcttccnctattaccccanctnncnaaaannaaaatttnctncaaanccatttaanttnnnntaacncccaannttttcccaantcacnacnnntgtanancnnncgnncannnnnannnnnnnnnnnnnctccctctttaagcgaattcctttagtccactgctaattcaggtagattattatgaggacttactttttatataaaaaaatggatttgtttcaggtcaaagtggatgtggagacacaaggagactttgttgagtctctagcaaatgaggtccgagcagctagttttgtaaatatcgacgacgttgttgcatttgtaaactggcttgatgaggaactatccttcttggtaagcttatctatttttttttcaatgcaacacatgacaaaatagttagtactgaaaaagggtcaaataacgttttaggtcgatgagcgggcagtactaaagcactttgattggccagagagcaaaactgatgcactaagagaggcagcctttgagtatcaagacctgctaaaattagaacacaaggtttcgtcgtttactgatgatccaaagcttgcatgtgaagaagctctcaagaagatgtattccttgcttgaaacgtaagcatctcctctgaaccattcttctcccaaattacatggttcctcagagtaagataataaatatcttgtcaagtccaattatctttagcaagcataagcatttgatgtttaattggactaacaagtatcatacttatgtcagagtggagcagagtgtttatgcgctacttcgtactagagacatggccatatcacgctacagggagtatggaataccggtggattggctgtctgattccggggtagttggcaaggttaacatacatctctagcctctatctattgccactttgttagaccatgtaggaaatctaaaatcgaaattccatcttgttatgttgggaatagatcaaattggcatctgttcagctggcgaagaagtatatgaatagggttgccacagagctagatgccttgcaaggcaccgagaaagagcccaacagagagttcttgcttcttcagggtgtgagatttgctttccgagttcatcaggtataattcatgggcatatatacgatggtgttgattaatctgaactaacatgatggtgttgattaatctgaactagcatgatggcccgtgcagattgcgcggctagcatcattatattttctctcatataatagcatatatgttttttttaatgtattattcaaatatattaaaatagcaacataattttaaattttatactaactttatgaaactactaatgtgtaatattaatattgtattttatatacgtgttagttattaattatttttaatatcagattttagttatttgtaaattatattcctatatgaactctagactcgtctttcaatatttattttttttaattccgaattttcgttatttgtaaattgtatttctatatagactctaggctcttcttccaatattatttatttttaattctgaatttttattatttctaattgtatttctatgtggactataaattcatcttttgataatctttaatttttaattttgaatttcagttacttctgaattgtattcctatattgactttagactcttcttcccattttttaatttcgaattttagttatttttaaattgtatttttatacgaactctaaactctacttttaattttattatgtttattctgaattttagttagttttaaattcctatatggactctataatctacttctaatattccttatttttaattctgattttctattacttctcaattgtattttcatatggactctatactctacttctaatactccttatttttaatttcgattttctattacttcttaattgtatttctatatggactctatactctacttctaatattccttatttttaattccgaatttctgttttttcttaattttattgctatatgaattctgcttttctttttctccgattaatatgagaatttctaggccataagagagaacgtggatgctcctttttttattcctttaataagttaatagattgagaaattgaaatttatctacttgacaacttattcttttctgacataagacaacttattcttgtgtgttgtatagtttgccggaggctttgacgaggaaagcatgaaggcgtttgaagagctaagaagcaagatgtgtacaacacagacatctgctccacaaatttcatagctctaaccatgcatgctgcattccacagttgactggtttattttctttgttgaaacttgaaaggcaagattaattgagtggctaaaaagtagaaaaatacaagtgtaaatcccaatatggcaggaaaggatgattaagtgtacagacgatgaatacatgcatactagattatg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0105375, RefSeq:Os12g0105375