Os12g0105950

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0105950| Description = Similar to Ubiquitin-activating enzyme E1 2| Version = NM_001189821.1 GI:297728772 GeneID:9271171| Length = 5685 bp|...")
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Gene Name

Os12g0105950

Description

Similar to Ubiquitin-activating enzyme E1 2

Version

NM_001189821.1 GI:297728772 GeneID:9271171

Length

5685 bp

Definition

Oryza sativa Japonica Group Os12g0105950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:311918..317602

Sequence Coding Region

313568..314500

Expression

GEO Profiles:Os12g0105950

Genome Context

<gbrowseImage1> name=NC_008405:311918..317602 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:311918..317602 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atccctttttttatctgcactcttcatgtaaacattaatgtaattttcctggttttgcagttcttctattttgattctgttgaatctctccctgttgaaccattggagccagccgagttgaagccagagaatactagatatgatgcacaaatcagtgtttttggatctaaccttcaaaagaaacttgagcaggcgaaaatatttatggttggttctggggcgcttggatgtgaattcttgaaaaacctagcactaatgggcatttcttgcaatcagaatggaaagctgacagtgacagatgatgatgttattgaaaagagcaatctcagtcgccagtttctcttccgtgactggaacattggtcagcccaagtccacggttgctgctactgctgctatggcaattaatcctaagcttcatgtcgaggcccttcagaacagagcaagtcctgagactgaaaatgtgttcaacgatgccttttgggagagcctggatgctgttgtcaatgcgttggacaatgttaccgcaagaatgtatattgactcccgatgtgtatatttccagaagccactcttggaatctgggactctgggtgctaaatgtaacacacagatggtcatacctcacctaacagagaactatggcgcatccagagatccacctgaaaagcaggcgccgatgtgtactgtacattcatttcctcataatattgatcattgcctaacctgggctaggtctgagtttgagggtttgcttgagaagacccccactgaagtaaatgccttcctatcgaatcctggtggatatgcaactgtagcaagaactgctggtgatgcacaggctagggatcagcttgagcgcgttattgaatgtctcgagagagagaagtgtgagacattccaagattgtattacctgggcccggctcaagtaa</cdnaseq>

Protein Sequence

<aaseq>IPFFICTLHVNINVIFLVLQFFYFDSVESLPVEPLEPAELKPEN TRYDAQISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGISCNQNGKLTVTDDD VIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPKLHVEALQNRASPETENVFNDAF WESLDAVVNALDNVTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASR DPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPTEVNAFLSNPGGYATVARTA GDAQARDQLERVIECLEREKCETFQDCITWARLK</aaseq>

Gene Sequence

<dnaseqindica>3103..4035#ttatcagacgcacaagcgaagcggccacaatttacaaattagcccttcttcttctttcctcctcaaaaccctagatagagtatacaagggaagcgaaggaagaaccaagtcgatccacgaatagggagacgaatccaaggtagaaggtgagttcctccagtccatcgcccaactccctcatctcttggtgcggtgctccctcccgtctcacgcccagccggtcgggtgtgtaggtctcgccgtggttgcgtcctggatctgacgcggcagctctcgccggctgccttcagcctcgtcctcgcggtgaccgtcgctgtcggcctcctcggcggcgccctacactatatgcttacccgcaagcgggaggatctcgccggcgaggtcgtccacgacttgcacaagaagacccgcgccgacgacgaacccgccgacgacaaccacaccatgaccaccggcagagcgcccgagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaagcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcggtacgccttaattagcttcccaaagcccctcatctactctacatacagatcgaccttattgagtaaaggggcaacttgtcttcaattaccactttcctgccacaatcgatcttatctattatagacccgtagacagttatcgatatcacttgtgcacaagttgatctttcgctactcattattatcaaattttatctcaatgcgtgctttacgatctccatgctgggttactgccctcagttccgcaagttctacatcttgttactagaaatatgaagcgtggtagcgtgtgcttcctattaactgattcttcaattttaagatttgtaaacaatgattataggagcagctcaaattgtcaaacacattgacgctcttgactcttgagtccattctttgaaccagagtttaaacttttcccagttgtgctggggtgctcttacccccttattacattttaggagcttgcatcatacaacaaatctgtgttagttctggtcagtcccctgtgctatgcaataagctaagatgcttgagacttggcatataatgcttaaccactcagaatgcaatgtctaccttgtgaaattgggagaccttttgaggattcaaatcacatgattgtacaagtttttggctttgcctttttcatactttcagatatgctgttgaaatttacttaatgccaatgtcttcctgcagccaagaaccttgtccttgcgggtgtcaagtccgtaaccttgcacgatgatgacaatgtggagctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgctcaaacttgtgttcagaagctacaggagctcaataatgctgttattatctctactataaccggtgatttgactaaggagcagctttctaatttccaggtatgtgagcatgcagttgatttgtgatctccttccttgctgtttgtttcttctacttcatcgtgtatgcctgttaatcttagatttcaagtagtcgtttcacttgtacttcagtccatgtgagctgcaagtctgtgactacaggctgtgcatcttttatttgatcttagtctaggaattgttgctactcttcatagaaagtatggaaattctttataggcaatacagtgcggtttcacaatttactaaatatatgtttgaatgaagaaataaagtcaacaattatgtataaggaagtgcacaatcaaggtatgcaaaatagtatttacacaccaaatttcatggagtttaggattaactatgcatgtgtatcactactagcttcctcaaattcctcttctgcttgatatttggaatagcataaaggttcgttgcattcattaggccttcagccctcaggtttctgtggtattatcgcctttttcctttgattgcttgatttttgtcaaagaaacatcttttacattcattggaactccatatttaatatttagcaacagtgcaacacatactatttaaacttagtgaatttggtcttagtagttagtgttatcatcgtattcccacacaatagctctattaaatttgtgccaattactgataagaaaaattaagagtaaagctgtagtagttccacatcatctcagtagactacagagacaatcgtgtgagtctgctttaattttgtggcatggcagtaaatccttcatactaatatggcctgcaaaaggtctgtagtagttcaagataatatttcagagccatctttctgttttgagcaatgactgtctctttgtattgcatattttcttattcttggaataaccatttccatgtgaacatacaggctgtggtctttactgatatcagcttagagaaagcagttgagtttgacagttactgccacaaccatcagccaccaattgctttcattaagtcagaaattcgtggcctttttggcagtgtcttttgtgactttggtcctgagtttactgtattggatgttgatggagaggagccacatacaggaatagtagcatcgatcagcaatgacaaccctgcgcttgtttcctgtgttgatgatgagcgtctggagttccaggatggtgatttagttgtgttctcagaagtccatggaatgagtgaactaaatgatgggaaaccaagaaagattaagaacgctaggccttattcttttactctagaagaagacactacctcatatgggacatatgttagaggtggtattgttactcaggtcaagccaccaaaggttcttaaattcaaaaccttgaaagacgccattaaggaaccaggagaatttctcatgagcgatttctccaaattcgaccgtccaccacttctgcatttggctttccaagcttctgcatcattttgcaagtggttccagggctgttctgaaccctatggctgcaatgtttggtggcattgtaggtcaagaggttgtgaaagcatgctcagggaaattccatccactttaccaggttataatctgtttccttcattataataacgtaaatccctttttttatctgcactcttcatgtaaacattaatgtaattttcctggttttgcagttcttctattttgattctgttgaatctctccctgttgaaccattggagccagccgagttgaagccagagaatactagatatgatgcacaaatcagtgtttttggatctaaccttcaaaagaaacttgagcaggcgaaaatatttatggttggttctggggcgcttggatgtgaattcttgaaaaacctagcactaatgggcatttcttgcaatcagaatggaaagctgacagtgacagatgatgatgttattgaaaagagcaatctcagtcgccagtttctcttccgtgactggaacattggtcagcccaagtccacggttgctgctactgctgctatggcaattaatcctaagcttcatgtcgaggcccttcagaacagagcaagtcctgagactgaaaatgtgttcaacgatgccttttgggagagcctggatgctgttgtcaatgcgttggacaatgttaccgcaagaatgtatattgactcccgatgtgtatatttccagaagccactcttggaatctgggactctgggtgctaaatgtaacacacagatggtcatacctcacctaacagagaactatggcgcatccagagatccacctgaaaagcaggcgccgatgtgtactgtacattcatttcctcataatattgatcattgcctaacctgggctaggtctgagtttgagggtttgcttgagaagacccccactgaagtaaatgccttcctatcgaatcctggtggatatgcaactgtagcaagaactgctggtgatgcacaggctagggatcagcttgagcgcgttattgaatgtctcgagagagagaagtgtgagacattccaagattgtattacctgggcccggctcaagtaagttagcacatctcttgagcacctttagcttattacgcatagggggtgaagctgtgtacatctgcttgaatttcattattgcaatatgcaagaatattccaaaatttaaattttgcaactaaagcatttgctttttgattgttgtttgcattttgcagcaactgacatacactttgcattttgtttgtattgattgttcatcttaggtttgaggattatttctccaaccgtgtgaagcaactgacatacactttccctgaagatgcgatgaccagctctggtgctcctttctggtctgctccaaagcgtttcccacgaccactggagttcttgacatctgatccaagccagcttaactttattttggctgctgcaattttaagggcagagacatttgggatacccatacctgactgggtcaaaaacccagcaaagatggctgaagctgttgacaaggtgattgttcctgatttccaaccaaaacagggggttaagatagttacagatgagaaggctactagtctttcgtctgcatctgttgatgatgctgctgtcattgaagagcttattgcaaagttagaagcaatttccaaaacactgcaaccaggattccagatgaaaccaatccagtttgagaaggttagtttcaatttttttccctgataagttcgagagagtaaatgtgattttgttttccttagcttttcctttgtagccaatcatgcacctctaggatgaacacccttatgaccctaaagagtttcacaaattgtgttagctttgagagttggttttctaagccgcattcatgtacgtgcaggatgatgacaccaattaccatatggacgtgatagctggttttgctaacatgcgggcaaggaactatagcattcctgaagtggacaagctgaaggcgaagttcatagctggcaggatcatccctgccattgccacctcaactgcgatggctactggtcttgtctgcttggaactgtacaaggtactcggtggtgggcacaaggttgaagactacaggaacacatttgcaaaccttgcaatccccctcttctctatggctgagccggtccctcccaagaccatcaagcaccaggacatggcctggactgtttgggaccgctggaccataactggcaacatcacgctgagggagcttctggactggctcaaggagaagggcctgaatgcatacagcatatcttgcggcacctcgctgctgtacaactcaatgttcccgaggcacaaggagcgtctagacaagaaggtggtcgatgtggcgagggaggtggcaaaggtggaggtgcccccataccggcgccatcttgacgtggtggtggcttgtgaggacgatgatgacaacgacgttgacatcccactggtatcaatctacttccggtgaagtaggggctgtcactccgttgacatggcgttggatttggtcttttcagagagacgatgtataagttgcaccggtgcctgtaaactaagtgggggtttaagccacattactgattttattttgctaccatcttgatagagctcgttcagatgggtggtttgttaccatccccgaaacttgatacgataccatcatattgataattgatgcatgatgataccgtacgactgaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0105950, RefSeq:Os12g0105950