Os12g0108600

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0108600| Description = Protein phosphatase 2C-like domain containing protein| Version = NM_001072484.2 GI:297612517 GeneID:4351280| Length ...")
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Gene Name

Os12g0108600

Description

Protein phosphatase 2C-like domain containing protein

Version

NM_001072484.2 GI:297612517 GeneID:4351280

Length

2742 bp

Definition

Oryza sativa Japonica Group Os12g0108600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:468381..471122

Sequence Coding Region

468381..468707,469445..469786,470023..470140,470221..470444,470703..471122

Expression

GEO Profiles:Os12g0108600

Genome Context

<gbrowseImage1> name=NC_008405:468381..471122 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:468381..471122 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggggtgcctgatgcccaacgcacaacatcaccatcaatgataaaacaacaaaactacttcaactacccctacgcattcaactccattctactctctaccccctccttccttccttccttccttcctagctacctctacgaagtaccagcagcagaagaagcaatggggatctgctgcagcaaggggaaggaggagcttgaggagggatttccatggaagcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagcaaggctggaagggcgctaaccaggatgccatgactacctgccaggactttgcggggcacaagggccagatattttgtggagtttttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccaatgaaactatcctcctctttggcactgaaaactgaacaagatccatccagcaacacagataaggaagccttggaaaaatcagattgcacctcattgagcgatacaagcaatgagaagcaattgttatccacctggaagaacatatttgtcaagacatttgaggatgtagatgatgatctgagacaaaattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgtcaggcagggtgatcacctgatcattgcaaatttgggcgattcacgtgcggttctttgcacccgagatagcaaggaccgcccaattccagttcaactaaccactgacctgaaaccaaatcttccaagcgaagctgagagaatcctgaattgtaaggggcgggtttttgccatggacgacgagccggacgtgtctaggatgtggctaccagaccaagacgcgccgggcctcgccatggcaagggcatttggagatttctgcttgaagagtcatggacttatctgtacaccagaagtctattacaggaagctatccgaaaaagatgaattcttggtacttgctactgacgggatatgggacgtgctatcgaacaaggaagtgatcaagatcgtatcgtcggctactgaccattccaaggccgccaagcagctggtcgagcgggcggtgcgcgcgtggcggcgcaagttcccgacgtcaatggtcgacgactgcgccgtcgtctgcctcttcttgaagccttctccgtcgtcggaggagagcacccatgtagacgcgaaggcgcctcaggtcgtgtcgttcacgggcagcttccgcaaggccctgggtggtggcggcggcggcgaggcggaggagggtacgaatgtatggagagctctggagggggtggctcgggtgaactcggtggtgaggctgccgcggatggacgccgtgctgagctggcggcggcggtcgacgtcgctcgaggaagacgacgatgcgaggattgattga</cdnaseq>

Protein Sequence

<aaseq>MDGVPDAQRTTSPSMIKQQNYFNYPYAFNSILLSTPSFLPSFLP SYLYEVPAAEEAMGICCSKGKEELEEGFPWKHDAFFHDQLWSAGVSMHTKQGWKGANQ DAMTTCQDFAGHKGQIFCGVFDGHGPLGREVARHVRDVLPMKLSSSLALKTEQDPSSN TDKEALEKSDCTSLSDTSNEKQLLSTWKNIFVKTFEDVDDDLRQNSGIDCICSGTTAV TVVRQGDHLIIANLGDSRAVLCTRDSKDRPIPVQLTTDLKPNLPSEAERILNCKGRVF AMDDEPDVSRMWLPDQDAPGLAMARAFGDFCLKSHGLICTPEVYYRKLSEKDEFLVLA TDGIWDVLSNKEVIKIVSSATDHSKAAKQLVERAVRAWRRKFPTSMVDDCAVVCLFLK PSPSSEESTHVDAKAPQVVSFTGSFRKALGGGGGGEAEEGTNVWRALEGVARVNSVVR LPRMDAVLSWRRRSTSLEEDDDARID</aaseq>

Gene Sequence

<dnaseqindica>1..327#1065..1406#1643..1760#1841..2064#2323..2742#atggatggggtgcctgatgcccaacgcacaacatcaccatcaatgataaaacaacaaaactacttcaactacccctacgcattcaactccattctactctctaccccctccttccttccttccttccttcctagctacctctacgaagtaccagcagcagaagaagcaatggggatctgctgcagcaaggggaaggaggagcttgaggagggatttccatggaagcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagcaaggctggaagggcgctaaccaggatgccatgactacctgccaggtaaccacatctctcttgcattggattgcttgctcatcacttgctgcctcattgtttccatgtttgttccagtcctcctttgcttcttgtctgtacagattctctcattttgatattatagtatcatgtactacacaagccgagtctctagccatggaggaatggggtaatgctagtctagaaaggggctatgtttgcctactacaacttcaattcaggacatgatttgactttgaacaccatacactagattcatccctgctctgctgtgctgaaactgattttttctttgtagcctgagctgtacctgcatttctgtaatagcctgtatttagttcaaatcttcaactagacctgattgcttgctcttgcatgtttgttcagtgctgcttagcttcttgtctgtgcaaattccctcatctttgtggtattatgtacacaagctaaagctagccatggagggaatagggtagtgctagtaaggggctttgattagctactacaaactgaattcagaacatgatttgagcaccgtgcactagattcatctctgcttttgctgaaactgaaaaatgtacctacatttctgtaatatttacttcaactgcacctgaatctctctagcttccacctccaatgccagtacatttcccttttccccttgatgtgcacattttacttaatatatatgtaagataatctgggtcttgatgtgctacctgtgtcaagtttattaggactttgcggggcacaagggccagatattttgtggagtttttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccaatgaaactatcctcctctttggcactgaaaactgaacaagatccatccagcaacacagataaggaagccttggaaaaatcagattgcacctcattgagcgatacaagcaatgagaagcaattgttatccacctggaagaacatatttgtcaagacatttgaggatgtagatgatgatctgagacaaaattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgtcaggcaggtactagtactacaactatgcaaaattgcaacatttttttgtattgccaatagtcttgcctatgtactagaaatacaccatttctgcctaaaaaacaagcttctgaaaccctcagatgcaacaaagatacttgccgaattttatgtgtatgttacagctatacttgtgcctaaatacagaactctcaaactcgtaatcattctgtttaaattctcagctactgttcttatacacagggtgatcacctgatcattgcaaatttgggcgattcacgtgcggttctttgcacccgagatagcaaggaccgcccaattccagttcaactaaccactgacctgaaaccaaatcttccaagtaagcctctgaatttctcaaagtacagagatgtctaaatttagacattcacttgtcattcatatgggggcttctgacaggcgaagctgagagaatcctgaattgtaaggggcgggtttttgccatggacgacgagccggacgtgtctaggatgtggctaccagaccaagacgcgccgggcctcgccatggcaagggcatttggagatttctgcttgaagagtcatggacttatctgtacaccagaagtctattacaggaagctatccgaaaaagatgaattcttggtacttgctactgacggggtaagaaaaaaataaagacttttgtctgatgatggtagccaaattcagtttcatttactcaccatctttccataatcaagagtaacttttctcttggttgtttcactactagtactagaaatgaaatgagcacaaagttaatagtgcaaaaccagaaaagcgacagttaactgaatcatgaatgcctttgcctcaatcaatcaatcgaattgtttttttttaaagataatgcaaccaatcaaattgatgtgggtgcagatatgggacgtgctatcgaacaaggaagtgatcaagatcgtatcgtcggctactgaccattccaaggccgccaagcagctggtcgagcgggcggtgcgcgcgtggcggcgcaagttcccgacgtcaatggtcgacgactgcgccgtcgtctgcctcttcttgaagccttctccgtcgtcggaggagagcacccatgtagacgcgaaggcgcctcaggtcgtgtcgttcacgggcagcttccgcaaggccctgggtggtggcggcggcggcgaggcggaggagggtacgaatgtatggagagctctggagggggtggctcgggtgaactcggtggtgaggctgccgcggatggacgccgtgctgagctggcggcggcggtcgacgtcgctcgaggaagacgacgatgcgaggattgattga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0108600, RefSeq:Os12g0108600