Os12g0110100

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0110100| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001072494.1 GI:115486949 GeneID:4351290| Length...")
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Gene Name

Os12g0110100

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001072494.1 GI:115486949 GeneID:4351290

Length

3551 bp

Definition

Oryza sativa Japonica Group Os12g0110100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:554086..557636

Sequence Coding Region

554476..554958,555046..555333,555412..555508,555589..555639,555892..556020
,556428..556626,556738..556876,556991..557059

Expression

GEO Profiles:Os12g0110100

Genome Context

<gbrowseImage1> name=NC_008405:554086..557636 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:554086..557636 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataaagagccaaccatggaggatttgccttcaacgctggggcagccttctacttctgcatcatcggttgatgctagatattcagccgacaggactgaagattcacagctcttcctctccgtcccagctttaaaccaagctgcgtcttatctggcccagacggcctcatatcttacccagtgcctccctgtatctggttacacagctatttctgaggaagggcaagaactagcaactctgccacctgcgtcaactgttggtggatcctcttttcaggcttcttccgaacagtcagcagactcatctcctggtgaaattgataatactggaagctcatctcaagaaatcacagaacagatggcacctttgcgcgtcttccagaatggggcttcactgtttcaaggtcttgtagaacgtgctcggaaaactgttcgtggctcagccaatgatattggatggcttcagcaggatcaaagcttacctccaactgaggacggaactgccagattcttggaaattcttgatgctgtgagaaaaaacgaacacaagctgcctgattcgatggtctatctgttggttccaggtttgtttagtaaccatgggcctctttactttgtcaagacaaaatcatatttctccaagatgggtctggcttgtcacattgccaagattcacagtgagtcttcagtaagtaaaaatgcaagggagataaaggaatatatagaagaaatatactggggatcgaagaagcgggtgctacttctcggccatagcaagggtggtgtagatgcagcagcagccctctccctttactggccacaactgaaagacaaggtcgcaggtttggctttagctcaaagcccatatggaggaagcccggttgcttcagatatcttgcgagaaggccagcttggtgactatgtcaggttacgtaaactcatggagattttggtatcaaaagtccttaagggtgatcttcaggctctggaagacctgacatatgagaggaggaaagaattcctgcggcagaacccattgcctcctgaggttcccattgtctcgttccacacagaggctagcatcactcccagtgtgcttacagccctctctcatgttgcacacttggagctcccagctgcagctgatgggaatcctactaggatcccagttgtaatgccactttcagctgcaatggcagcatgctcacaacttctggtggcaaggtatggtgagaagagtgatggtcttgtgacaaggaaggatgctgaagttcctggatcagtagtggtccggccagagcggaagttggaccatgcatggatggtttattcctcactcaatgaggaacctagggatcaggcagacacatcgcaggtatgtgaagccctgctgactctgcttgttgaggttgcgcagaaacggaggcatgagatggctatgaaagatgaataa</cdnaseq>

Protein Sequence

<aaseq>MDKEPTMEDLPSTLGQPSTSASSVDARYSADRTEDSQLFLSVPA LNQAASYLAQTASYLTQCLPVSGYTAISEEGQELATLPPASTVGGSSFQASSEQSADS SPGEIDNTGSSSQEITEQMAPLRVFQNGASLFQGLVERARKTVRGSANDIGWLQQDQS LPPTEDGTARFLEILDAVRKNEHKLPDSMVYLLVPGLFSNHGPLYFVKTKSYFSKMGL ACHIAKIHSESSVSKNAREIKEYIEEIYWGSKKRVLLLGHSKGGVDAAAALSLYWPQL KDKVAGLALAQSPYGGSPVASDILREGQLGDYVRLRKLMEILVSKVLKGDLQALEDLT YERRKEFLRQNPLPPEVPIVSFHTEASITPSVLTALSHVAHLELPAAADGNPTRIPVV MPLSAAMAACSQLLVARYGEKSDGLVTRKDAEVPGSVVVRPERKLDHAWMVYSSLNEE PRDQADTSQVCEALLTLLVEVAQKRRHEMAMKDE</aaseq>

Gene Sequence

<dnaseqindica>2679..3161#2304..2591#2129..2225#1998..2048#1617..1745#1011..1209#761..899#578..646#ggaagaccagaaaagtctggactctggaagaaagaaagcggcgcggcggccggcggggcacggcacggtggacatcacagggaaggagaaacgcttcttcccgttgttcccaaatcccaatccgtgggagcgcagtcgcaggccaacgatcgagtggagtcgagcacaaggaaaaggaacgcatcgccatcgccatcgccatcgcctccctccctgtcctgtccagctcacctccaaaccctccatcttcttgatttactatacttgattccggtaacttcttcctccttccttccttccatgaatcaataatttgtgagtactcgttaacttggttgggtaaacgatatgagcgtgtttctcaagagatcagatgggggatggatgggataccttcccttcctttattacttttaggcttgcccaccagtaattgagataccctcaatcctgacttcctcacacgctcgctaccaatccatctcatcaacttgtgctgcattccattccatagtcttcctcttcgctacttattgcattttctattctcgttgcttcacatgtagtacaaccgctcatggataaagagccaaccatggaggatttgccttcaacgctggggcagccttctacttctgcatcatcggtatgtgcgttctccggttgtaccatgtatgcatttaattgccaaaagtttgccacaccacacaattacttgccttctacttccaattttgttaatgtttattgataaatctaggttgatgctagatattcagccgacaggactgaagattcacagctcttcctctccgtcccagctttaaaccaagctgcgtcttatctggcccagacggcctcatatcttacccagtgcctccctgtatctggttacacaggttggcctctccataacttcgacgaatgactctcttctcttgtgccaatttcattagaaaatagtcacgcaatgtggtaattctgctgcatctccttgatttattgcacagctatttctgaggaagggcaagaactagcaactctgccacctgcgtcaactgttggtggatcctcttttcaggcttcttccgaacagtcagcagactcatctcctggtgaaattgataatactggaagctcatctcaagaaatcacagaacagatggcacctttgcgcgtcttccagaatggggcttcactgtttcaagggtacagactgcttttgcatttgtcttttcgtctcctatgaattctaatcaaacaaataggtgatagtgtgacacaagctgcaaataacatatcatcacttatcatgaataaactacgcatgcttgaactttatgaagtgttaagtgcacttgttatgcaattgccatctattggaactggctctttttttagtgcacacacttctattttatgcactgtgccaaataatcaattcaataggtgtgcatctaaaagaacttgtgcatgaaaacacgtgtcattttgatgtccattaagaataaattgcaatataaaatttagctttcgtggatgaggtgttcttttataagatgttccggtgttgggaggactaatctttggtatccttcttgatatctttctgtcagtcttgtagaacgtgctcggaaaactgttcgtggctcagccaatgatattggatggcttcagcaggatcaaagcttacctccaactgaggacggaactgccagattcttggaaattcttgatgctgtgaggtcagcaaacataataagttgcataagttgcatttcaatgtttaaattctaagaaacactcgggggtcttccggctagctccacaaggtggtgggctagacgacttgggttcgaagcctcagcccttctaattatttgatattaggtccttccctaatattcgcgcttttaaattatgcaactctcttaataaaagatgtaatgtatgcttcgtcttcttttatctcatgtgatcatttgattccctgtcagaaaaaacgaacacaagctgcctgattcgatggtctatctgttggttccaggcaagtttgctgccactttggttgtgaattcgcaatttggcaattttttgtgctgacattagcttttctattgtttgcaggtttgtttagtaaccatgggcctctttactttgtcaagacaaaatcatatttctccaagatgggtctggcttgtcacattgccaagattcacagtgaggtacttccatacagtaatattctttgttgcttactcttaatattgttttcatcaagtaacatataatgaattatgcagtcttcagtaagtaaaaatgcaagggagataaaggaatatatagaagaaatatactggggatcgaagaagcgggtgctacttctcggccatagcaagggtggtgtagatgcagcagcagccctctccctttactggccacaactgaaagacaaggtcgcaggtttggctttagctcaaagcccatatggaggaagcccggttgcttcagatatcttgcgagaaggccagcttggtgactatgtcaggttacgtaaactcatggagattttggtatcaaaagtccttaaggtatttgtcttgatgagcttgatcgttaccttgtcggcctgcacaatggacgacactgatgtttattgttttctttttttccttcagggtgatcttcaggctctggaagacctgacatatgagaggaggaaagaattcctgcggcagaacccattgcctcctgaggttcccattgtctcgttccacacagaggctagcatcactcccagtgtgcttacagccctctctcatgttgcacacttggagctcccagctgcagctgatgggaatcctactaggatcccagttgtaatgccactttcagctgcaatggcagcatgctcacaacttctggtggcaaggtatggtgagaagagtgatggtcttgtgacaaggaaggatgctgaagttcctggatcagtagtggtccggccagagcggaagttggaccatgcatggatggtttattcctcactcaatgaggaacctagggatcaggcagacacatcgcaggtatgtgaagccctgctgactctgcttgttgaggttgcgcagaaacggaggcatgagatggctatgaaagatgaataaaaatgttagtgttgctctgacagatatttgtaatcgtagacttctgttgttgaatgtactgtccaaacttatgctgaaactgcttctgggccacttttttttgtttggtttacagaagcttcatatatcaactgaatctgaaaggtgaaaagggcaacaatggaagcgtttctctttttttttttaatttaccataaggaaattgtatgatttggtcgtttctcatgtctcatggtattccccttcccaatcaggtgattcgtctactaggtctgaatttgattatggttgtaagtgtatttaggcatgattccatgagtcatgggtatgcaacagcttgagatcgcaatgtatagaactctttatatcctagtctgttgcagattcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0110100, RefSeq:Os12g0110100