Os12g0110300

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Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0110300| Description = Conserved hypothetical protein| Version = NM_001072496.1 GI:115486953 GeneID:4351292| Length = 3547 bp| Definition ...")
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Gene Name

Os12g0110300

Description

Conserved hypothetical protein

Version

NM_001072496.1 GI:115486953 GeneID:4351292

Length

3547 bp

Definition

Oryza sativa Japonica Group Os12g0110300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:558283..561829

Sequence Coding Region

558521..558675,558765..558835,558914..558998,559366..559484,559570..559718
,560116..560157,560413..560484,560788..560882,561446..561535
,561633..561747

Expression

GEO Profiles:Os12g0110300

Genome Context

<gbrowseImage1> name=NC_008405:558283..561829 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:558283..561829 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgcgacggaggctgcctccacctcggaggcggaggctgaggggaggggcaaacccatcgtcgtccgtgtcaagcgcaagccctcccagacccgccccgacgctttctggctagagatcaatgagaggccggtgaagaaggctatgctcgatttctccagcctttcagtctccgatccatcctctgctcctaataaagcttcagaggaaccacgggttaagaaacttctggtacagcacattgagacagtacaccattctgaggcagttcaggatgttttgcactctcttctgcattctgacttggatgccaaagagataaagagcaagacaaaggaatggaacaacagaactaagcaagataaaaaacaagaccagctacggtcagcagccagacagaggcatgaggatcttggaagaaatgctcgctttgcgcaaatttggaggagtcggaaaggagacaggaatgaagttgatgaatcactacgagaaatatgccatctttatgatgctgtccaagtagattctgatgaagagaagcatcccacagaaccaaggattacgtcttttgaagagggcgcaattttatgcaattttcttccacttatacgggaacatttgccgtcagctgctgaagaaattgaatcagatattatttcgctggcacaatcggaagattcagatgtttatgacatatatactgtcacggaggtggatgatgatacaacaatggagggcacatcttcagctccatacccactattacaagtggacaatgacgatgatgtatgttatgatgatgacgatccttatggtacagatgattcaaatgcggaggataacccattatatgattatcctgaagagttgtcagaggatgaggatgatgattccaatagcgagaatccattttcagagctagacggttctgatcccgagtatgagaaggaagaggtggaggaagaaagggatgaagacgggagatag</cdnaseq>

Protein Sequence

<aaseq>MAAATEAASTSEAEAEGRGKPIVVRVKRKPSQTRPDAFWLEINE RPVKKAMLDFSSLSVSDPSSAPNKASEEPRVKKLLVQHIETVHHSEAVQDVLHSLLHS DLDAKEIKSKTKEWNNRTKQDKKQDQLRSAARQRHEDLGRNARFAQIWRSRKGDRNEV DESLREICHLYDAVQVDSDEEKHPTEPRITSFEEGAILCNFLPLIREHLPSAAEEIES DIISLAQSEDSDVYDIYTVTEVDDDTTMEGTSSAPYPLLQVDNDDDVCYDDDDPYGTD DSNAEDNPLYDYPEELSEDEDDDSNSENPFSELDGSDPEYEKEEVEEERDEDGR</aaseq>

Gene Sequence

<dnaseqindica>3155..3309#2995..3065#2832..2916#2346..2464#2112..2260#1673..1714#1346..1417#948..1042#295..384#83..197#aaagcacccaacttgttctcgtttgttctgacggcgagagaaccaaccaaccctaccttggctttgccggcgggcggcggcgatggcggccgcgacggaggctgcctccacctcggaggcggaggctgaggggaggggcaaacccatcgtcgtccgtgtcaagcgcaagccctcccagacccgccccgacgctttctgtgagtaaacctttctcctttccgctcattgctcctccccctttctctacccaacttcttagtggaaaaaacagacatgatttttgtgattcgttagggctagagatcaatgagaggccggtgaagaaggctatgctcgatttctccagcctttcagtctccgatccatcctctgctcctaataaaggtatctacttctacttgtcacacgcttttttccctttcataaacatatgagaccgaagcaacatttttttttctttcaaaagaacatataagtgagatactgacgagaattttttttcctttcatatgaactgaggagaaaattagtactatcaaatattaggacagaagcaacattttttttcctttcaaaagaacatataagtgagatactaactagaaatttagtactatcaaattaagaaagaagcaaatacatttccgcattaattataaggtgaaacggtgagcaccagtgtcgtttcaagcatggctcgaacacaggcctcacactgagctacacccaggttctcacttgtgacaaacttaatcagtaatcacaccagcagttgcttgtctctgcaaattgatgctggaagacactcgtcctgataccacaatagtaggattctacttaccagttaattagcctccttgacaccatgataccgctaacacaagttgcatatacttgtactttgacaccgcacgtaaacatgatattcacagtttccgtgcttacagcttcagaggaaccacgggttaagaaacttctggtacagcacattgagacagtacaccattctgaggcagttcaggatgttttgcactctcttctggtaataatcgttttcttttcattacttttaaatttgtctagtcttccacaatttggtttcctcgcatggcataatcagttcagttaatgtgtcattactcatcggcatctgagtatatctcttgttattttttacttttcatggagttatatagacaatagagcaacacaattcttttattgacttatggataccaacattatgcaactaaattgtcttttaaaaaaatattgccagttgtactttaccttatgaccataagggttggacagtggatcacaattacaccattttactttgtagcattctgacttggatgccaaagagataaagagcaagacaaaggaatggaacaacagaactaagcaagataaagtaagtgaaactttttcctagtatttacttaattaattgttatatttttgccatgtcttcagttgttcccatgaaattattattaataattaagcgtttcttttagttttttccttgaatatttgaaagacccttcactgatagtagcaactactttactactgctttatgtatcttgttcttgaagattttgaaataaggaaggatgttatgtacttgttcatatgctaaaattgttcttttttctgcgaacagaaacaagaccagctacggtcagcagccagacagaggcatgaggtgtgcctattttcttactatagtcaacttcatctgcttaagtttttagtacttattactaacttatgtgaatttggtggatagagtaaatgaatgaaatattttatggattgaccaaatcaatataggagaaacagggtttatggtattatctttgagtcaactctgttaagtatggccaatcccaagtgttgttattggcatgggccttgcagaatcatattacatatgttaggtcttggtggctggctgactacagtattattagtacctttcttgtcactagagtttttttggttgaatcatatgcttcacatccagcaaagagacgtggcagtgccttcttgtgttgtttcccacatttttatgcaagtttttgctcattaatcctttataggatcttggaagaaatgctcgctttgcgcaaatttggaggagtcggaaaggagacaggaatgaagttgatgaatcactacgagaaatatgccatctttatgatgctgtccaagtagattctgatgaagagaagcatcccacagaaccaaggtaaggttttccttgtgagatttattagttcttccaaaatcgaaatgttgtactgtttcatggttcttacgatctttctcttcaggattacgtcttttgaagagggcgcaattttatgcaattttcttccacttatacgggaacatttgccgtcagctgctgaagaaattgaatcagatattatttcgctggcacaatcggaaggtctgcaactttttttccttcagatgttcaaaaaaaaactggaaatttcaattgaacttattttagaaattgtggattttggttgcctttccatctattaattcatagctgaggcagctaaagctaagatgctattcttggaggggttattagtgtgaaataaattctgccactcctgtgctaacggaaaattgaacagaacagtgttttttttatgggttacaacttttagtgcgaggaaacattttttgtcttcaattgtcatgaatgttttaatcgtgaattagttatgtgcataaggctcaaacagagcgagaacttttgctccagcactagttttgatgggctcgtcttttctgatgagcagattcagatgtttatgacatatatactgtcacggaggtggatgatgatacaacaatggagggcacatcttcagctccatacccactgtaatctgattgatgtgtgtttactatggtatattcttctgtggggatattttctgaacattctcttttttacatcagattacaagtggacaatgacgatgatgtatgttatgatgatgacgatccttatggtacagatgattcaaatggtaattgtacaaccatccacctgcttccatggtgaaccagtgagtccttattatctgattttcttaacttgtcgatcttgaatatgcagcggaggataacccattatatgattatcctgaagagttgtcagaggatgaggatgatgattccaatagcgagaatccattttcagagctagacggttctgatcccgagtatgagaaggaagaggtggaggaagaaagggatgaagacgggagatagaatctatgctcggggtacaaatatgggtagtaactagagataagatgatgtatgggctagcgcttgagctggctgtgatgtttcctgttgggctggctatatgtgagagaacttttggtgttagtatgctgatgaattgtattcccagcctcagctgttagacctgtaactcgatatgatcactgaaggagaagtgtaggagtaagaagaatgaattattaaggccgagtttagttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0110300, RefSeq:Os12g0110300