Os12g0119500

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Revision as of 10:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0119500| Description = PIG-P domain containing protein| Version = NM_001189833.1 GI:297728796 GeneID:9272283| Length = 3686 bp| Definition...")
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Gene Name

Os12g0119500

Description

PIG-P domain containing protein

Version

NM_001189833.1 GI:297728796 GeneID:9272283

Length

3686 bp

Definition

Oryza sativa Japonica Group Os12g0119500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:932846..936531

Sequence Coding Region

935964..936155,936270..936422

Expression

GEO Profiles:Os12g0119500

Genome Context

<gbrowseImage1> name=NC_008405:932846..936531 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:932846..936531 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatgcagttgttcgcttcgcctggatgagtgatttgagtctcatgggtggcgttgtgcgcaccggggtggttgctttcaagcattgggcactggccatgccgtcgttgttgctggtggtggcagcgcaggggatggtgctctacatggcctccaactttctgctcctacttgcttggccactatctatgatgaatttgcctgcggcgtgtggtactgcaataggggaggataaacccatcgaggccatctcaattactggcatcctttgtgcttcacctaggcaatgtacagttagaggcaatagtaaaggtctgattctgcctataaattctaatcattag</cdnaseq>

Protein Sequence

<aaseq>MHAVVRFAWMSDLSLMGGVVRTGVVAFKHWALAMPSLLLVVAAQ GMVLYMASNFLLLLAWPLSMMNLPAACGTAIGEDKPIEAISITGILCASPRQCTVRGN SKGLILPINSNH</aaseq>

Gene Sequence

<dnaseqindica>3119..3310#3425..3577#gcccctcctccgacttctctccctccaccgccgcctcctccacaccatcaccgcccctcaatccatcctcgcgcctccctcgaccgccgcccctctgctgtcgtcgcatcccgcctcctccacaccatcgccgccccccaatccaccctcgcgactccccacatcgacgcgtcggcgcccccatcgtcaccgtcgaggattcgccatcgacgccctcctctctctcgcactcaccccgtgacccgacgccgccgactcctccctcctccctcatcgcgccgaaaccctagacccgcaccgccctcgaccgccgcccctccgccgtcgtcgcatcctgcctcctccccaaggccggcgccaactattcccaaggttggtgtactccccttcctcttggtactaggtctctaaatctgcatattcacatgttaatctattccctctcctcggttcgacgtctattggtgagttaatccatattaaccttggttgggcacatataggaaggcagatacaggcaggcacacacattgtcatcaaccgatgtaatttgattgtgactgcatgcccataacataatgcttaacacaaggacagattgaacataagcacagcaacagtaactaaatacaatgggttctgaacttttttttttccctgaagaaaatgggttctgaagtctgaactgagttaaaaaaaaagttcatttcttctaggaccacagcatcaggttgatgcagttggctgaagccattagatcagaaattgatcaggaaagactaattctgctattcagcaagacaaaagtcaaaactttacacccactgtcccgctcgaatgaaatctgaggctcgaaacatgatacaataatctttttgatagaaacagcatatacatttggttggctcacttggcccaaagggaatttttcaatgcataaatgcttatttttagtatcgtgccgatgtcttccatacttcgatttgtcggagtgggaaatgaatggtgcagtgcaagttatcgaggtggtacattactgtttaagttatctaaacaggatcgtacatataaatagatgacttgaatatgtttcacagtgtaaataatggtaacattggggaaaagagtatgccatgagtatttagcttttgttatactaacatactaatatccattggcgcaagttatactaatatccattgttttatcctttgtgttcatgaaatttatggccgtttcttaggtggatttcgtgtccaaaaattcgctgtgatttgatttgacctttttgtattcatcaggagtgctgataacataacttgtatggctttcatatacaatagcagggagttgaaggagttgtagttgtaccaatttctctccgttatttcccagccgatcccatcgcccatgaccatgttgcccgcctatcctccgtcgctgcctccacgagtcgcctcacgtctatctcctccgcgcaaccatcaatcccgcgtcgatctcctccgcgtcccccttctgcgagccccggccaccaacgacggcgccctctattgcggcaacctcctcctcagccggtggtaagtaacgttgtaaaatttttttcatgttatgatttcttccatacccctcccccccatttgtttataatggagtttatagtacatctataaagcgacgtttatttgtttgttgtggatgaaaatttagtggatcaaacacattagtctggggttagtttacaatttctaatgttagtttgcaaactccatatcccaaaaagtattgtcatgaaaaaatattgaatttatatatgattatgcttttcatatggttagtgaaaaatgcgagtcagggatttagtaagaaatgctggagccctcattgttcctctgctcaaattgaccaaatagtactgtccacctcgaactacgtagattctactcttcatatgcctactcttttttgatcatttgtactgagtcaaataaatttgatatgtagctttggtgtccttaaatggcatgattgttttataaagaccctgtgattttataaagaccatgtttcctttgtatggacctatgggtaactgcaaacaaacttattcagtaggtactgaacttaagtactccctccgtcctaaaatgtagctatttctagcacagtgtcttgtcccaaaatgaagctatttcttcacctacctcctcctctcaaccaatcacaaccattcttcttcacctactttctcttttcaaccaatcacacacttcctccaatcattctcacctactttcttaatacccgtgccaacctaaaaaatggctttattttgggacggaggaagtatttcttttatttttagtccatgcaggacaggatttaaaagagattgctggtttatttacagcttgtgcatttctaaatatttgcaatcattaatgtattatttgaattttgtagcacactatcaagtagaacacaaactgaaaggccataagtcctgtgatttctgcaacaccaggattatatccacatttgttctcaatattaattcagacaaatgaaaaagctgctaatatatcaatgaccactacatatcctatatagcaactgattaaagcttctaataatagaaatatttactaaaatattttccttttcttagcaatgggaagtgttcgggctgccacaccattaggtgcagtgagactgaatcttggagataaattattgaagaactgaactctaattgtgagtgcctttgtactttctattcttttcaccctgatggatcttgtttgtaactggttttaaattcaatcacctattaacttgtctcctgattgctaaagaagaagatatgcagcgcaattccagtaaccaaggttcagatcaactcagttgagggagaggcagtattgccgccgcctggctgcgctccctcgaagtcacctactacctcaccaggtcggtactacatgcagaccaaggttcagatcaactcagttgagggagaggcagtattgccgccgcctggctgcgctccctcagcatcacctactaccccgccaggtcggtactacatgcagcgacggccgccgtctccactcctagcatgcatgcagttgttcgcttcgcctggatgagtgatttgagtctcatgggtggcgttgtgcgcaccggggtggttgctttcaagcattgggcactggccatgccgtcgttgttgctggtggtggcagcgcaggggatggtgctctacatggcctccaactttctgctcctacttgcttggccactatctatggtgagactcttactgtgatcacttcggtagtacagttccagcattgttgcatttgctgctgcagtttagtgatacatattcagaaattgttcccttatttttgtcttttgccagatgaatttgcctgcggcgtgtggtactgcaataggggaggataaacccatcgaggccatctcaattactggcatcctttgtgcttcacctaggcaatgtacagttagaggcaatagtaaaggtctgattctgcctataaattctaatcattagcctacggtcagtggaagggaaaatttaaaacagattctaaactgagacctaacattgattttatattatggacttaaatctgaaattgattttgcttgatggatttgaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0119500, RefSeq:Os12g0119500