Os12g0127800

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Revision as of 10:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0127800| Description = VQ domain containing protein| Version = NM_001072588.2 GI:297612589 GeneID:4351394| Length = 2288 bp| Definition = ...")
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Gene Name

Os12g0127800

Description

VQ domain containing protein

Version

NM_001072588.2 GI:297612589 GeneID:4351394

Length

2288 bp

Definition

Oryza sativa Japonica Group Os12g0127800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1331911..1334198

Sequence Coding Region

1331911..1332467,1334135..1334198

Expression

GEO Profiles:Os12g0127800

Genome Context

<gbrowseImage1> name=NC_008405:1331911..1334198 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1331911..1334198 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacatgctcgactcctccacctcctcctccccttggcttcctcccgacctcatgcctcccccgccgccgccgccgcccgccgccgccactctccaccaccacttccgcgccgccgccgccgcccccggccgccgccgcatcgccaagcgccgaccgcgcccgtcgcggcgccttcccaccacctacatcagcgccgacccggcaaacttccgccgcatggtgcaccaggtcaccggcgccgacgacctccctccccctcctccatcgctctctctacagcagacgacggagctcctcctcccggccgtgcacgccgctccagcgggctcgcccggcgctgcaggcgcgctgatgcttcccacgctcgacacctcggcgttcctgctcggccgccgcgcggagccggcggccgcggcgccgccgtgcgacgagtcggtggcgttggtaagaggaggagcgggtaattacggcagcaacaacaatagcattagcagcagtagcagcagcggcaactgtggtggtggcttccccaccttggactcatgggatctccttgtacgtgtgctgtgccatcaacaagtgtggctctggctagcacttagcagcccctggtcctga</cdnaseq>

Protein Sequence

<aaseq>MHMLDSSTSSSPWLPPDLMPPPPPPPPAAATLHHHFRAAAAAPG RRRIAKRRPRPSRRLPTTYISADPANFRRMVHQVTGADDLPPPPPSLSLQQTTELLLP AVHAAPAGSPGAAGALMLPTLDTSAFLLGRRAEPAAAAPPCDESVALVRGGAGNYGSN NNSISSSSSSGNCGGGFPTLDSWDLLVRVLCHQQVWLWLALSSPWS</aaseq>

Gene Sequence

<dnaseqindica>1..557#2225..2288#atgcacatgctcgactcctccacctcctcctccccttggcttcctcccgacctcatgcctcccccgccgccgccgccgcccgccgccgccactctccaccaccacttccgcgccgccgccgccgcccccggccgccgccgcatcgccaagcgccgaccgcgcccgtcgcggcgccttcccaccacctacatcagcgccgacccggcaaacttccgccgcatggtgcaccaggtcaccggcgccgacgacctccctccccctcctccatcgctctctctacagcagacgacggagctcctcctcccggccgtgcacgccgctccagcgggctcgcccggcgctgcaggcgcgctgatgcttcccacgctcgacacctcggcgttcctgctcggccgccgcgcggagccggcggccgcggcgccgccgtgcgacgagtcggtggcgttggtaagaggaggagcgggtaattacggcagcaacaacaatagcattagcagcagtagcagcagcggcaactgtggtggtggcttccccaccttggactcatgggatctcctgtaaatctagatcatatattgtcgatttctatcgatttctgattcttcatggctgtaattaactaagacgagatcaatgaacaggttggagcatctatctacctgattctctgttcgtgtccttgttaattttaagcttatgcctcgtatacacatggatgattttttttatcagtagtgttattttattgatcttacttaatttagagttccttttcttttaattattaagtgcgactgttaagttcgttttgatcttccttctgctgattccagcatcactgcatcagcctcaaggttcttaatttatgcaggatttttgttcttgtgaaactcttttgctttgtttgattagttggctcttgcttttctattgattttgagtctttgatgaatcctccttccaacagtagagctgctccagcaccatctcactgaacatgtggtttctgatcatttggtgaacaaaatgtaacaaaagatgtttttttatattagtacattttagagaggtgcttagtgcattaattcagctttagctatataattaattaattaatgcaccaaaccactgtggggggcagtagcatgtaaatgctgcttagacagtaagatacgttaggatgaagctaacagttcaattggagcagagcagggttgagaatcagtacttggaaaagattgattgtgagatacaacaataataatatcgtaatcatcgagccaggtttttttagaaaaataaagtattgcaatcatatatgcacacgcatactaagactgagtttagatccaaaagtttttcttcaaacttctaacttttttatcacatcaaaacttttttacatggctgtgtttagtttctgaaatcggggagaagtttggggaaagttggtagtttggaaaaaaaattttgagagtttatgtgtaggaaagttttggatgtgatggaaagttgaaagtttaggggaagtttggtgtgaactaaacaggaccatacataaattttcaacttttctgtcacatcgttcaaatttcaaccaaactttcaattttgacgtgaactaaacacaacttaaggttcagcggaagagtaactttttttaaaaaaacctaaggcggaactttgttccacttttatatttagaagaagataattgacccagtttataaaaaaaatcggacccgaaaactacacaactgtcacggttaattacagaaaaaccagctaaaaaccaccgttacacaactaactttacattgatctaccagtaacatcgttagtagaagtgatattaacataattgtactattaataattgatgtgatagtataaatagatataattcattgtaaagagtactataaaacaccgcagggcggaaaatgaaaggaaaaaaaaagaaacaaattgggtgtggaatcaacatgcatgcttaatgggaagaaaaaacaaatatgaagtgtatttgttaaacacatatgtaggcttgatctagagctgagctgtttggtgcttacaagtaactacctctagattgcccctaaaatacaatgcaaaaagggaagttgacaaggaaaggactatatcaacggagaggaagaatcagaggcacgagctgttgactactgagtctgcgtgtgatttctttctcctcaatttgcagtgtacgtgtgctgtgccatcaacaagtgtggctctggctagcacttagcagcccctggtcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0127800, RefSeq:Os12g0127800