Phr1 gene
Contents
Annotated Information
Function
研究人员从水稻籼稻品种93-11中克隆并鉴定了控制水稻籼粳分类的基因并将其命名为PHR1。转基因功能互补实验证明PHR1是区分水稻籼粳分类的基因。在水稻中抑制或过量表达PHR1，得到具不同抗病虫害能力的转基因水稻，表明可以利用基因工程技术调控该基因从而调节植物抗性。
Mutation
Expression
Evolution
Knowledge Extension
Labs working on this gene
References
Yanchun Yu,Tian Tang, Qian Qian, YonghongWang,Meixian Yan,Dali Zeng, Bin Han, Chung-IWu,Suhua Shi, and Jiayang Lia,Independent Losses of Function in a Polyphenol Oxidase in Rice: Differentiation in Grain Discoloration between Subspecies and the Role of Positive Selection under Domestication.The Plant Cell, 2008.Vol. 20: 2946–2959,
Structured Information
| Gene Name |
Os02g0170300 |
|---|---|
| Description |
Similar to MADS box protein ZMM17 |
| Version |
NM_001052563.1 GI:115444496 GeneID:4328443 |
| Length |
4006 bp |
| Definition |
Oryza sativa Japonica Group Os02g0170300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:3833127..3837132 |
| Sequence Coding Region |
3833796..3834074,3834202..3834243,3834352..3834393,3834894..3835055,3835193..3835262 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:3833127..3837132 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:3833127..3837132 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggcgcggcaagatcgagatcaagaggatcgagaacgcgacgaacaggcaggtgacattctcgaagaggcggggagggctactgaagaaggcgaacgagctcgccgtgctctgcgacgcccgcgtcggcgtcgtcatcttctccagcaccggcaagatgttcgagtactgcagccctacctgcagtttgagggaactcatcgagcattaccagaccgtcaccaacactcatttcgaggagatcaaccacgatcagcaaatatttgtggagatgactcggatgaggaacgagatggagaagctggacggtggcatcaggaggttcaccggcgacgacctctccaacctcacgctcgccgacatcaacgatctcgagcagcagctcgaattctccgtcaccaaagtccgtgcgagaaagcatcagctcctgaaccagcagctggacaaccttcgtcgcaaggagcacatcctggaagaccagaacagcttcctgtgccgcatgatcaacgagaaccatcatcaggcggcggtgggcggcggcgacgtgaaggcgatggtggagatggcgccggtgctgtcgatgctgacggcggcgccggcgtactacggcgaggagtcgtcgagcaccgcgctgcagctcaccccgccgctgcacgccgtcgacgccgccgccgccgccgggttccggctgcagccgacgcagcccaacctgcaggaccccggctgcagcagcagcagcttccatgccgccgccgccggccacggcctgcagctgtggtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVG VVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQQIFVEMTRMRNEMEKL DGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILED QNSFLCRMINENHHQAAVGGGDVKAMVEMAPVLSMLTAAPAYYGEESSSTALQLTPPL HAVDAAAAAGFRLQPTQPNLQDPGCSSSSFHAAAAGHGLQLW</aaseq> |
| Gene Sequence |
<dnaseqindica>3059..3337#2890..2931#2740..2781#2078..2239#1871..1940#427..614#agcctttgaagcaagcttagcacttcacaaggtatgtacatagcacattactactcctgccctatctatctaccctgttcatgagtaattcaagaaaaaaaaaaggacaccttttctagctagttcttcatcctttcgcagcaaagagtttttacatctctagctactagttgttctcttctctacatgaaattttttctacttctgattgcaccctttacatagctgtggggggaaatccaatttgagcacccatgccttatgttgattttaacaaaattcgtccatgtatcgatatgttcataacttggccatttctgttcttcttcttcttcttcttcttcttcagtttcctcttgtgcagaagaaggagaaacaaaagaacacagaaattaaattaaactcgatcaggaaggtatagcaggcatggggcgcggcaagatcgagatcaagaggatcgagaacgcgacgaacaggcaggtgacattctcgaagaggcggggagggctactgaagaaggcgaacgagctcgccgtgctctgcgacgcccgcgtcggcgtcgtcatcttctccagcaccggcaagatgttcgagtactgcagccctacctgcaggtacggttcttgttttgttctcttatattatcagatgctgttcaatctttcctttctccagcttagtgtctcttgttctctttttagtgcttgatttgatgggttaattaatttcttgttttttgtcaaccaagagattaagttttcggctaagtttctctcggcctttattttgtttttcagagaaaattaactaactcatgcagtttctaccctttgttttctttgggcaagagtgtttaattatgatcatttgatctgttcatataatggatggatgccttgcatttattcttcatctgaactatttttcttgtcctgaactcctgatcgatcgagtttttcctaccttcattttaactattttcagtgtatatgtatgcatctgcagtttcctttgatatattttcgaagagccaagaatctattacaaaattaaatcatgatcaaaggcatacataagcaatgatctatatgccctagtgtctcttgtgacttgattacgcacttgtcttttacatctctgagcaacatatatgtatgtagatttgcaacttgatcctgaatttatagtcaactagttaattaatccttatttccctctttctaatgatttctaggatcgagctgggttttttaggtggatttccccaaaaaactatttcatatgtggctaatttaatcaaactaaaagatgtatatcaacagggaatataatttgaacaagtgtacgacagtacgaccatatcttatcttatgttatgcatgtttttatacttaaaaaaagatgcgaatataagagaatgacctaatattaaataattagaagaggtgaggtttcgaaccttggttgtctagtccaccactttgtggagctagccggaagatccccagacgtttctcacatgattttatactgttctgcagcatattatagttaattaatatgtgaatattcatgtgaagttctttcttccgatcccctgttcattcctgttattagttaagaaattttcgtttgtttcattttgatctaaaataatatactctctgtaagtatatacatcaccaagagaaaattctagctacaaaattaatttataccatctgatttgtacatcagagattgtcatttcttttttgaatgcgcaaaagaattacacatgcaccattccaattagatacatgaacttatcaaagtattaattaactcacaactaatcaaggtacttgtttcaatgtttgacaatatatagtttgagggaactcatcgagcattaccagaccgtcaccaacactcatttcgaggagatcaaccacgatcaggtatacattaattttacaatcagcaacacaatgtctgatcaatatcagaatatatatcgatctatctgccagcagttgaaatgaaattttctttcaaatgcactgatcaaatataattaatgtgcacatatatatagcaaatatttgtggagatgactcggatgaggaacgagatggagaagctggacggtggcatcaggaggttcaccggcgacgacctctccaacctcacgctcgccgacatcaacgatctcgagcagcagctcgaattctccgtcaccaaagtccgtgcgagaaaggtaattacttcctccatatcatattataagtcgttttaattttttttacaaatttatttaagtttaatcaagtttataaaaaatatattagtatttcaaaaacaaacattatcaaaatgtattcagtgatagatttaataaaattaatttggtattacatgtgttgctatttttttctataaatttaatcaaacttaaaagaaaaaaaattaaaatgacttgtaatatgaaatagagctagtaattgattaagaagatagtatttgatgaatgaatcattcttcagagttaatttagaatgatcagtctctgattcaatggtaaatggtaagtttagggtttagggattaattgatcccatagttttttcctcttttctgtaaagctttgctttcgtaagttttttattttgttatattcaatgaaataggtgtatctaagtgccgattcgttaaaaaaataaaaaatagttgtttcacattaattcttgcttgttgcagcatcagctcctgaaccagcagctggacaaccttcgtcgcaaggtaattaatttgcactactaaactgatcatgaaacaccaaatactttgctgtatgatgatgaaaaaaaaaatgattgattcaattctatgcatgaaattgatgaacaggagcacatcctggaagaccagaacagcttcctgtgccgcatggtatacgtatagttagttaatcagtaatcaagaattcattaaaatgttttgattcttgaagcacatatatgtacattaattatggtgtttggttgattcttgtacatgaaactatatatgaattcagatcaacgagaaccatcatcaggcggcggtgggcggcggcgacgtgaaggcgatggtggagatggcgccggtgctgtcgatgctgacggcggcgccggcgtactacggcgaggagtcgtcgagcaccgcgctgcagctcaccccgccgctgcacgccgtcgacgccgccgccgccgccgggttccggctgcagccgacgcagcccaacctgcaggaccccggctgcagcagcagcagcttccatgccgccgccgccggccacggcctgcagctgtggtaagaacaaacgaagcaaagcatacatggcacatcctgatactctcatcaggtgtgtgatgtgaatatatatatcgcaatgattttatctactagtttatgtacttcatccgttttataatataagtcattctagtatttttcatattcatattgatattaatgaatacatatatatatcaatataaatgtaggaaatgctagaataacttacattgtgaaacggagggagtataattcatcgcaacacagctgcgaattaatcatgcattgatatcattctgcagagatctagatgattgcttgctaattaagcacatgatggcattgtcgattctgggagctaggagtaacttggagaccatgaagatgcatgatcagctgatgatagacgatcgagttgggttgctgtgttgttcaattgttcatcgttctggacatatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctaattagcacatcagaataatcaagcttttctacctagttaactagtacagctgctaagtaccttttgatttgttggtgtgtgaactactgaactggagttggatattaaggtctccatgcatttgcatggttaattagcagagagatcattgaggtttttaggatgtaac</dnaseqindica> |
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