Os12g0472500

From RiceWiki
Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0472500| Description = Glutelin family protein| Version = NM_001073285.1 GI:115488531 GeneID:4352199| Length = 2453 bp| Definition = Oryza...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0472500

Description

Glutelin family protein

Version

NM_001073285.1 GI:115488531 GeneID:4352199

Length

2453 bp

Definition

Oryza sativa Japonica Group Os12g0472500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17133143..17135595

Sequence Coding Region

17133694..17133826,17134519..17134635,17134998..17135428

Expression

GEO Profiles:Os12g0472500

Genome Context

<gbrowseImage1> name=NC_008405:17133143..17135595 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:17133143..17135595 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggtctcctcggcgtccagtacgccgccgccgccggcgttcgcggccgcggcgtgggcggtggtgctgctcgccatgctccgctccgacgtcgccctcgccgccgccgcatcctccaacgacgacacaggtctctcgccgttgatgccgccgccgccgctcgccgccccggttcccgcggcggtttctccggccccggcgacgcctcccgccgtcctctccccccgcaagctcctccgcccgcaaggcgcggacgtcgtcggcgtcggtttcgtctccggcagcggcggcggaggaggaggagacggagtacggacgcgccgggtggacgacgggtgcgcgggggcggacgacatcgcgatctaccaggggagggcgacgccgctgccgagcggggtgccggcgtacacggtggacgtgatgaaccggtgcgccggcggcggcggcggcgacgaggagtgcgccatcgcggggatccacgtgcggtgcgggtggttcagctcggtgagcctggtggacccgcgcgtgttccgccggctcggccacgacgactgcctcctcaacgacggccgcccgctcctcgccggcgagaccgtctccttcgagtacaccaactccttcccctacaagctctccgtctccgtcgcaacctgcgtcgtcgaccccgccgccccatag</cdnaseq>

Protein Sequence

<aaseq>MRVSSASSTPPPPAFAAAAWAVVLLAMLRSDVALAAAASSNDDT GLSPLMPPPPLAAPVPAAVSPAPATPPAVLSPRKLLRPQGADVVGVGFVSGSGGGGGG DGVRTRRVDDGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGI HVRCGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVAT CVVDPAAP</aaseq>

Gene Sequence

<dnaseqindica>552..684#1377..1493#1856..2286#cttttcgtttcgtttcgccgcccgcttccgccgcgcgcgcgcacgtgcgagaggggagagggggatagcgacgccgcgcccaaaccctactactactcctcctcctcctccgcgtcctcgccggccactcgtcgccggcctccgtcgccgcctccgcctcgtcatccaccagaaggtaggcgccgacctcctcctcctctttctccttctcgagcctacgcgggcgagggttccgaggtgtgcgagtgtggtctcgtctccctcccggagacgcgtgctccggtgggtgggagggatggtgtccgcgtcggtttgggcggaggcggaggagcgggggaagggggcgcgtggcccgaggcggcgccgctgcgtgtcctctctctcgcaagctttctgcgggcctttttggtttctccgccgatgctctagttcgtcgcatccttttctgtgtagtattttcgttgcagatggagccatggaggtggcagatctgtctcgtgaccccccggagttttttgtttcaggcgttcgtgcgcacgggtttccgcgcgatgagggtctcctcggcgtccagtacgccgccgccgccggcgttcgcggccgcggcgtgggcggtggtgctgctcgccatgctccgctccgacgtcgccctcgccgccgccgcatcctccaacgacgacacaggtgacgcaccattccaaaaccaccccgcttcatcctgtgcgctgctgcttgattctcccacacatgattcgccagttttttttgtctgcacatatatttctgaaaaaaaaatcgcactcctttcctcgtcaaatctctctgcgttttggctccgtttcgatgagatcattctccctaaaaatttttgtatgaataaaattctcgaaataccgcacgggtgcaatggatttgcaccattagttttgcatcactaggagcatcattaataattacggacgagatctctctctctctccctccatccgtgcggtttctggaatttgcattgtactgctactgttcatcgtgttcatgcctccacgtcgacctgcgccttcctttccaagattgggatacgaacaaggagaggcgcagcgcggtgggcccaccaccaacccacccacccccacccatccatccattcccatggattcgaaatgttttttttttggttggttggttgatttcgctctgttcgtatcgctgttctcccactgtgtgctactgccgccgccgcgtcgtggatttgtcgcgtggggtgaagtttttgggcttttgtgtgtcgctgacggggtggggcccactccgggttggtcccacgtgtctgtcgccgtgtggcgggggtctaatcgtgcgggcgtttttttgtgcaggtctctcgccgttgatgccgccgccgccgctcgccgccccggttcccgcggcggtttctccggccccggcgacgcctcccgccgtcctctccccccgcaagctcctccgcccgcaaggtaaaagcaagcttcctatccccgattccctcggcgatgcttatctcgccgtccgattgaccgatcggacggctgctgcttggcccacgcggccggcgctttctccgacaagcctctgacgcaggccgtgggggccagaggggggggagcctgatatgtggggtccacggagacgcctcctgttttgtcctcggagacgagacgatccctttggcgcgccatgattccgtcgccctcacattccattctgtcgtatcggagcatgacatgtgggcccgtgtctgcggtgctctcagtttttcgtcgccgcatgcatgcagtgactgaccggtggggcccgcttgctttcaccctttttgcaggcgcggacgtcgtcggcgtcggtttcgtctccggcagcggcggcggaggaggaggagacggagtacggacgcgccgggtggacgacgggtgcgcgggggcggacgacatcgcgatctaccaggggagggcgacgccgctgccgagcggggtgccggcgtacacggtggacgtgatgaaccggtgcgccggcggcggcggcggcgacgaggagtgcgccatcgcggggatccacgtgcggtgcgggtggttcagctcggtgagcctggtggacccgcgcgtgttccgccggctcggccacgacgactgcctcctcaacgacggccgcccgctcctcgccggcgagaccgtctccttcgagtacaccaactccttcccctacaagctctccgtctccgtcgcaacctgcgtcgtcgaccccgccgccccatagccgccgtcaatcgccgcaaggaaaaagtagacaaaacaaaagaaacgaaagagaaacagtagtactagtgacatctcttgccttactagtttttttgttcttttctttttttttgaccccatgtcagtatcactcacagaacaacagctcaccatttgctacgcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0472500, RefSeq:Os12g0472500