Os01g0104100

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os01g0104100

Description

Zinc finger, RING-type domain containing protein

Version

NM_001048297.1 GI:115434007 GeneID:4326292

Length

4403 bp

Definition

Oryza sativa Japonica Group Os01g0104100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:208771..213173

Sequence Coding Region

209283..209563,209659..209890,210015..210160,211265..211352,211433..211579
,212490..212639,212741..212788

Expression

GEO Profiles:Os01g0104100

Genome Context

<gbrowseImage1> name=NC_008394:208771..213173 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:208771..213173 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctctctatgcccctttgccaaactcgcctccgctggcgccacatgccccgtaaaatcatcatcagacaacaaaaccaccatcaatcacaccgacgacgacgacgacgacaatgaaaaaactggcaatgctaacaccgatcctcgtgtggtgccaccaaagtgcccctttggctatgactccaacaccttcaagcttggcccactcagctgcatggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcccacaagttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgacatccaagggatcgagcccgatgatgagcttcaaggccttgtcgaccgcttcattgatggccatgcccgaatcaagagatcacatgctgcaggcgatggggaagccgcaagtgacaacaagaccaaggtcatttacgaggatgtctccatggagagaggggcttttctggtccagcaagcgatgagggcctttcgcgcacagaacattgaaagtgcaaagtcaaggctcagtatgtgtgcacaagacatcagggaagaattgaaatctaaacaagacaaccaagaactgtgttctcaacttggagctgtgttaggaatgcttggggactgctgtcggaccttgggagatgctccttcagcaatcacttactatgaagaaagtgctgaattcctctcgaaattgcccaaaaaagatctggagttggtccatactctctcagtttcactaaataaaattggagatcttcgctattatgatggggacctccactcagcaagaagctattatgcgcgttcgttggatgttcgcagaagtgcagcaaaagaacactcagctgtggcttcccaggtcattgatgtagcaacttctcttgccaaagttgcggatgtcgatagaaatcttgggaacgaaagcatggcagttgagggttttgaggaagcaattaaatgccttgagaatttgaagctggaatctggagaggccagtcttgagcagcggcgtctctcggttctcgactttctacaaaaacaattggatgacaagtga</cdnaseq>

Protein Sequence

<aaseq>MSSLCPFAKLASAGATCPVKSSSDNKTTINHTDDDDDDNEKTGN ANTDPRVVPPKCPFGYDSNTFKLGPLSCMVCHALLHQSSKCTPCSHKFCKACILRFKD CPLCGADIQGIEPDDELQGLVDRFIDGHARIKRSHAAGDGEAASDNKTKVIYEDVSME RGAFLVQQAMRAFRAQNIESAKSRLSMCAQDIREELKSKQDNQELCSQLGAVLGMLGD CCRTLGDAPSAITYYEESAEFLSKLPKKDLELVHTLSVSLNKIGDLRYYDGDLHSARS YYARSLDVRRSAAKEHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLE NLKLESGEASLEQRRLSVLDFLQKQLDDK</aaseq>

Gene Sequence

<dnaseqindica>513..793#889..1120#1245..1390#2495..2582#2663..2809#3720..3869#3971..4018#gtggttggcaaatcaatcgaatcgatcccctctcatccgctcgcggacacagaatctctcctctccctctcggcgcccaggttctcgccgccgcccgccccttccttctcttctcctcctacgtacgtaagtatcgattccatgcccccctcccccatcccccatcatcatacgatttctagggtttcatgcatcggggatgaatcgtccatgcgatttaattctattccctattactatattataatcgtatatagagattgatagatagatagatagatagattcttcttacaacaagaagaataaaccaaccccaattttttcccaacctctatctaataatcaagctgctccctactttaacaatctctctcattcttctcaattcaattctactactgtactgcatttagtctcatgcttcattgaattttcactcaactgcttgccaccaatctttctttcatgcaggtaaataatccacctacgatagatacgaccaaccccattatgagctctctatgcccctttgccaaactcgcctccgctggcgccacatgccccgtaaaatcatcatcagacaacaaaaccaccatcaatcacaccgacgacgacgacgacgacaatgaaaaaactggcaatgctaacaccgatcctcgtgtggtgccaccaaagtgcccctttggctatgactccaacaccttcaagcttggcccactcagctgcatggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcccacaagttctgcaagtgcgtagtatcatatttcaatactagctttctactagtaattccttccgtccgtcaatagtatataccttctgaacactggatttccttgtcagggcatgcatattgcgctttaaggactgtccattgtgtggtgctgacatccaagggatcgagcccgatgatgagcttcaaggccttgtcgaccgcttcattgatggccatgcccgaatcaagagatcacatgctgcaggcgatggggaagccgcaagtgacaacaagaccaaggtcatttacgaggatgtctccatggagagaggggcttttctggtccagcaagcgatgagggtcagttacgctcagcttcttttacctttgaaatttgcatatatccttcatcctctgctctgtattaatttattaatgctctctatatatattttgataatacctctgacttttacatatccaggcctttcgcgcacagaacattgaaagtgcaaagtcaaggctcagtatgtgtgcacaagacatcagggaagaattgaaatctaaacaagacaaccaagaactgtgttctcaacttggagctgtgttaggaatgcttggggactgctggtacgacaattttctcttggggactggaggatatatgtgaacctgctattgatacgtttatagcctactcctactccctccgtgtctaaataatttacatgtttgactttcccatttaaactttgaccattatttgctcttaagttgttagacctaattgaacaaaagtttgattcttatatttaggacataacacactttaatagcatggcatcatttcttgtgtttgtaaatatataacaaaaatactagtggtcaaagttcaaaagtgaatcgtgcctgctatcagtcatttaaaaacgaagggagtattgagctaaattcttgcatgctttttttttcttctaattgagagaacagttcttaactttgaaatgtctgtagctttcctcaaaagaagagagatgctcaatgctttgtatctgttgtgcacgagggcccattctagccttggcccgttcatctttctgctcattcagggcctagttatctttcatgtgttctaatacctgaattttctatgttttgactaggcatagaacttgccttccgaacaagggaaaggtgaatcttgttgtaataacgtttgttctccattaaaatattaaactgttatgtgcctcagcgtgttctacaatactgatgcacagaccacagaggttgtctagcaggttgtagactgatagtgatgccaattatgactggtcgcaattcgtctgaatagaagtatattcacagctcggaaaacgtgggaaacctttaaccatgccctacaccagccagcatactgatgccaatagcaagctgatagcttgtgtaatagccagctaccagctaccaagagcctagttctagtcaggatgtctggtacctgctcatataaaagcctcagggtctgtcataagttgttgctgaactcattgtgtttccatgtcactggacggtgttttgtttttatccctatgttataatatctggctgaactttttccatgaatttcattgtgctctattatttttcataatatttgtgacacataaccatggcagtatttagcttattttttctttgtttgttcacaattgacctcattccatgccacagtcggaccttgggagatgctccttcagcaatcacttactatgaagaaagtgctgaattcctctcgaaattgcccaaaaaagatctggaggttgtattttgttgttaatatgatcataatagcatgatagtaagttctcatgttgatttaacttttgcatacatctacagttggtccatactctctcagtttcactaaataaaattggagatcttcgctattatgatggggacctccactcagcaagaagctattatgcgcgttcgttggatgttcgcagaagtgcagcaaaagaacactcagctgtggcttcccaggtaattactgtgttactgattaagattagctataaatacaaaatgggctgcagttatcatcttagaaacagaaggaaccttattcatcactctcttttgtccctgctcttttgtgctagctcttccatatcattacgctagtagatgtatcttatatgttccatgaaaatgatatcaacagatattgatcaaaagttcttccttatcttagatttttattatacaggcataattagaaatgttaagtgtttaaatgtgtattagataccatatcaatgagcgctccaattgcacatggaccagtagctattttatcccataattcatggtcctggtactgattgacattgcacataatacatactagtaggcagagaaaaatggatgtaaaaaaggggttcctacacagaatttttgtattcctttctctgaagcaaattgttgtctgaagtctgtggtagcaagtgccagaccatactaggaagtttggcaatttgccataaatgatggctacagatcttttaacctatatttatgcttgttcccaattcaaccgtgccaataaaattgtcaataccattgagatgatggctttatttcattacttagtctgtggccaaaaaattggcactgccaaaattttggtaatgaaaaccaattaaaacgcgtacacataaaaagtattggctacaaaccaaatgaacaacttcacagaaatttgtacaacacacaaaatggttgcaaaccaaacaagccctttatcttctctaaattttaatgtcagtagaaccaaaagaagataacaaagcattttgtaagattgtggtaggctttagctgctacatggaacagacatattcttgagtgttttttcttttgctgttcatgatctgtctacttgtggatataggtcattgatgtagcaacttctcttgccaaagttgcggatgtcgatagaaatcttgggaacgaaagcatggcagttgagggttttgaggaagcaattaaatgccttgagaatttgaagctggaatctggagaggccagtcttgagcagcgggtagctactacttatccttgtgtactgcctttcatccatgcgctcctatttgtggtgctctcgacgactgacttttatcatgtactgtaatacttttgcagcgtctctcggttctcgactttctacaaaaacaattggatgacaagtgatatgcacggttctaatttgaagagcacactcacaggatatatgcactatccataatgaggatcagctccagtacgtagtctctgtgatgcatatggaagggagttgctccagatcgaatgaatggtaactggtgtgtatttgaggtttgctgcgacacagaataaatactttcgagttgtatatgtttcttgtgtctgccacgggtggagacctctttgagtccctgaggcaccacggagacgaaacttctcggaagtactgattccttgttgcctctgccgtgttatgtgaatgttatcccactgtatatttattgatgatataatataagaaaagaacagcacagatgttttgtatcgccctatcaaatttaagttgttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0104100, RefSeq:Os01g0104100