BGIOSGA019282

From RiceWiki
Revision as of 16:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA019282

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019282, complete gene.

LocusTag

P0453H11.8

Ensembl Transcript ID

BGIOSGA019282-TA

Ensembl Protein ID

BGIOSGA019282-PA

Length

5406

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5225019..5230424

Sequence Coding Region

5225019..5226188,5227051..5227260,5227368..5227463,5227545..5227763,5228137..5228331
,5228402..5228548,5228648..5228797,5229954..5230084,5230181..5230424

Genome Context

<gbrowseImage1> name=IndicaChromosome05:5225019..5230424 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:5225019..5230424 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCGGTGGCGCGGCAGCGGGGCATCGACGTGGTGCTCAACGAGGAGTCCAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCCAGGTATCTCGGGGAGGACAGGGCGTTCACCCCCACGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGGATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGATAAATTTAAGGATGAGTACAAAATAGACGTCTACCAGAATGCCCGCGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTTGGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCTCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTTGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAATTGGCCCTTTCCAATCCAGCAATCCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTCCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACTGATGCCAAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGATTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAAATGGCTCTTCAGGACAGAGTAATGGAAGAAACCAAGGAGAAAAAGAATGCTGTCGAGGCTTATGTTTATGACATGCGTAACAAGCTCTATGACAAGTACACCGATTTTGTCATGTCTGAGTACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTATGAAGATGGTGAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTTGGTGATCCTATTGAGATCCGCTACAAAGAGTGGGCCGAAAGAAGCTCTTCTATTAACCAGCTGGTACATTGCATCAACGGTTTTAAAGAGGTTGCGTTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAAAAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTCGTGCAGACCGATTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MSVVGFDVGNESGIVAVARQRGIDVVLNEESKRETPAVVCFGDKQRFIGTAGAASSTMNPRNSVSQIKRLLGRAFADPELQRDLASFPFRVSEGPDGFPLVHARYLGEDRAFTPTQLLAMVLSNLKGIAEGNLNAAVFDCCIGIPAYFTDLQRRAVADAAAIAGLRPLRLFHETTATALAYGIYKTDLPEKEWLNVAFIDVGHASMQVSIVGYKKGQLNMLSHAYDRSLGGRDFDEVLFKHFADKFKDEYKIDVYQNARACVRLRVACEKLKKMLSANPEAPLNIECLMDEKDVRGFIKREEFEQISSPVLQRVKAPLEKALAEAGLTTENVHFVEVVGSGSRVPAIIRIITEFFGKEPRRTMNASECVARGCALQCAVLSPTFKVREFEVNDGFPFSIALSCKPDSENTESEQTIVFSKGSPVPSAKTVTFYRSNTFAVDVVSVDADDLQMAKKISSYTIGPFQSSNPEKAKVNVKACLNIHGIVSIESAMMLEEEVDVPVATTNETLKDDTKMDTDDALGDPAPGTDENMQESKCSADATHGAAENGKPDSEEISAPMDTDAKVEPLIKNVKKIDVPVSGLVYGALGSEELVKASENEYEMALQDRVMEETKEKKNAVEAYVYDMRNKLYDKYTDFVMSEYKEGFIAKLQEVEDWLYEDGEDETKGVYIAKLEELKKVGDPIEIRYKEWAERSSSINQLVHCINGFKEVALSNSQAFDHIDMSEKQKVLDECSEAEIWLIEKQQQQDALPKHADPVLLISDMKKKAEALDRSCRPIMSKPKPAPKPQTPPPPTPPTESPTTPEPQTPEQQQQSNGAGEAEEPTSEGGAQDQEPTAEQMDTDKPDGWAEPSA</aaseq>

Gene Sequence

<dnaseqindica>1..1170#2033..2242#2350..2445#2527..2745#3119..3313#3384..3530#3630..3779#4936..5066#5163..5406#ATGAGCGTGGTGGGGTTCGACGTCGGCAATGAGAGCGGCATCGTCGCGGTGGCGCGGCAGCGGGGCATCGACGTGGTGCTCAACGAGGAGTCCAAGCGGGAGACCCCCGCCGTCGTCTGCTTCGGCGACAAGCAGCGCTTCATCGGCACCGCGGGGGCCGCGTCCTCCACCATGAACCCTAGGAACTCCGTCTCCCAGATCAAGCGCCTCCTCGGCCGCGCCTTCGCCGACCCGGAGCTGCAGCGCGACCTCGCCTCCTTCCCGTTCCGCGTCTCCGAGGGCCCCGACGGCTTCCCGCTCGTCCACGCCAGGTATCTCGGGGAGGACAGGGCGTTCACCCCCACGCAGCTGCTCGCCATGGTGCTCTCCAACCTCAAGGGGATCGCCGAGGGCAATCTCAACGCCGCGGTCTTCGATTGCTGCATTGGCATCCCGGCGTATTTCACTGATCTGCAGCGAAGGGCTGTCGCCGATGCCGCCGCCATCGCGGGCCTCCGCCCGCTGCGCCTGTTCCATGAGACGACCGCCACGGCGCTGGCTTATGGGATTTACAAGACCGATCTCCCGGAGAAGGAGTGGTTGAATGTGGCGTTCATCGATGTCGGGCATGCTAGCATGCAGGTTAGCATCGTCGGGTACAAGAAAGGGCAGCTCAACATGCTCTCGCATGCGTATGACCGGTCCCTTGGCGGGAGAGACTTTGATGAGGTTCTATTCAAGCACTTTGCGGATAAATTTAAGGATGAGTACAAAATAGACGTCTACCAGAATGCCCGCGCGTGCGTTAGGCTGCGTGTGGCGTGTGAAAAGCTCAAGAAGATGCTGAGTGCCAATCCAGAGGCACCACTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGCGGGGATTTATAAAACGGGAGGAGTTCGAACAGATCAGTTCCCCAGTGCTACAACGTGTGAAGGCTCCATTGGAAAAGGCCTTGGCTGAAGCTGGCTTAACAACAGAAAATGTGCACTTTGTTGAGGTTGTTGGATCGGGCTCTCGTGTTCCTGCAATAATCAGGATAATCACTGAATTTTTTGGAAAGGAACCGAGGAGGACTATGAATGCAAGTGAATGTGTTGCCCGGGGATGCGCTCTTCAGTGTGCTGTTCTTAGCCCCACTTTCAAAGTCCGGGAATTTGAGGTACTGATTTATCTATTTAAGTTTCTGTTGACGTTTGTTTCTGCCTCTGCCGTAGTGTATCTATTTTGTCCGATTCTAATGTTCTTGATTATGTAACGTAAACTAGAGAAAGCTGCTGGTTATTTGTCCCACATGCGTTGGTTTTTGGAAGCATTCCATGCTTCATTATTATATTTCTACAAATAAATAGTAAATGTGCCACTAGAAGATTTTAATAGCAGAATGGGTATCTCAGTATTTTTTTTAACTAGAATGTCTTTCAATTACTATATGTGCCCACATATTTATGCCATGTAATCAATGAATGCTTATCTCTTTACATTTTCCGTTTTGACCATCTGATGTCGTTGCCTACTTTTAGAGTCTAATTTGTCATCCATATGGTTTTATTTCCTCTGGGCCTCCCTCTGCTAAGTTAATATGAGCTCATGGCATGTATTAATCCGAATTAATTATATTATTGCTATTCAGGCAGTGGTACTATGTCTTTGGATTATGTGTATCAGTACACTATACTTTGGATTTGGTGTTTTACACACTGTCCACTTGTAACATTACATGAAGCAAGGAGTGCGGAATGGTGTATTGCTTTTATTATATGACAGAATGGCAGAATAAAAATGGTACATATAGAATATATATTTCCACTAAGACATTGTTGGTGATGCTAGTAGAGATGGCTTAATGTCAAATGGACTGGAAATTATCTGTAGTGGCCGATTGTACATTTACACCAACTAATTTCATAGTCATGCCTGGCAGACGTGCTATTTTTATCTGTGAGAGAATGCTTAAGAGATTGGATGATATCTTCTTTTATTGTCCCTGTGCAAATAGTTAACCTATGCTTGATATTTTGCAGGTCAATGATGGGTTCCCGTTTTCAATTGCTTTGTCATGCAAACCGGATTCTGAGAACACTGAATCCGAACAGACTATCGTGTTCTCAAAAGGAAGTCCAGTCCCTAGTGCCAAAACTGTGACCTTCTATAGGTCCAATACATTTGCAGTAGACGTTGTGAGTGTTGATGCAGATGATTTGCAAATGGCTAAAAAAATCAGCTCCTATACAGTAAGCAACATTGCAAACTTTCGCCAGTATTCAAACCTGATGTTAGTTGTGGTTCTTAACTTGTTCAACAGTTGCTGATTTGCCATGCTGTGATTGACCGTATGCAGATTGGCCCTTTCCAATCCAGCAATCCTGAGAAGGCAAAAGTGAATGTGAAAGCATGTCTCAACATCCATGGGATAGTCTCTATTGAATCAGCAATGGTAAGTTAAAAGGAATCCCATCATCTTCTCGAGTAGCACGCAATGTCTTTCTGATCTGGGCTTTGGTTCTTTTGTATGCAGATGCTGGAGGAGGAAGTGGATGTTCCGGTAGCAACTACAAATGAGACACTAAAGGATGATACTAAAATGGATACAGATGATGCACTAGGTGACCCTGCTCCTGGAACTGATGAGAACATGCAGGAATCCAAATGTTCTGCAGATGCCACTCATGGTGCTGCAGAAAATGGGAAGCCAGATTCTGAGGAAATATCTGCTCCAATGGATACTGATGCCAAGGTATGGATCTACTGTTGGGTGCTGGCACACTTCAGCTTTAGTGTATGTATGTAGTTGGCATATCTGTTGCAGTATGTTTTCAAATAACGATGTTCTATATTGTCTTAATTTGGTGGTTTCCTATCACCATGAATGGAATTCCCTCGTCATGGTAGTGTGTTCAGAGCATTTGATAATCTCCTTTTGAGTTTTAGATACTGTGCTGATTCATAGCTTTGTAAGTGCTATCTTGTGAAGTGAAGCACAACGAATATAATTTAGTTACTTATAACATAGGAACTTCATGCAAGTTGTGATCTATCTTGTTTATGCAAATGAGAGCTGCCCATCTTTTTATGAGACATATTTTTCTGAAATGGTTTTTCTTTTTTAGGTTGAGCCATTGATAAAGAATGTGAAGAAAATTGATGTTCCAGTTTCTGGATTGGTTTATGGTGCACTGGGGTCTGAAGAATTGGTGAAAGCTTCTGAGAATGAGTATGAAATGGCTCTTCAGGACAGAGTAATGGAAGAAACCAAGGAGAAAAAGAATGCTGTCGAGGCTTATGTTTATGACATGCGTAACAAGGTATGCCGAGTTTAATTTTGTGATGATATATGAACATTTGAACAGTACCTGATGAGTTTCTTGCGTTCAGCTCTATGACAAGTACACCGATTTTGTCATGTCTGAGTACAAGGAAGGGTTTATTGCCAAGCTTCAGGAGGTTGAGGATTGGCTGTATGAAGATGGTGAAGATGAGACAAAAGGGGTTTATATTGCAAAGCTGGAAGAACTTAAAAAGGTACCTCTTTTATTGCACTTCTTGGTTTAAATTGTGTCTTTATGTGTTGGTTTGGTTTGTTCTTGGACATTGAGTTTTGATATGCCTGAACTTTTTTAGGTTGGTGATCCTATTGAGATCCGCTACAAAGAGTGGGCCGAAAGAAGCTCTTCTATTAACCAGCTGGTACATTGCATCAACGGTTTTAAAGAGGTTGCGTTGTCTAATAGCCAAGCATTTGATCACATCGACATGTCAGAAAAACAAAAGGTATGTATTCATAGAGATGGATAATTTTCTCTTGATAAGGAAATTCCTTGTATGCCACTCAATGTTCCTCAGTTACCTAATCTGCCAGATAGAAAGTTGCTTTCCTTTAATACCATGACTTTCTAAGTTCCAACTCTTATGTGTCAAGTGTTAACCTCATTAGGCTTGACTGCCGTTAACTCTCAGCAAGTTGTCTGGTTTTTGTCAAATACCAATCTTACTGTTGCAAATCTATGGCCGAGGTGCCATTTTTTATTTTATCTTCTCTTTCTTATCTATCCCCTGCTCTGTGGAACATGAAAGCAGTCCACAGACACTACCGCCACTAGGTTGAGCACTGCCAGTCTGCCACTAGGCATTATTTCGCAGATGTAGCTAGCATAAAACATGTGCTGCTGTTCCTTTCTCGCTCATGCAATCTAACAGCTCTCATCTGCTACACAACCTTGCTCTTCCACACTCGCTGGGCTGGGGTGTTCCAAATCCACCAGTCCTCAGCAGCTCCTATAGGAAGCACAATTTCTTCTGACACCAAATTGAATCAAATACAGTAGTTTTGCACCACACTGAAGGTGGCCAATAGGGGAGCAAGTGTAAGAAGCAGAAGAATCATCTCAGCCTCTCAGGAAGAGAAGGAAGGCTGACAAGTTGGCCCACACATGCGGGACATGCCTTAGGGCAAATACGACATTTTATAACCTGAGAAACATAACATTAATGGGCAGGCTGAAATGACAAATAAGGGTAACAAAAGTTTCTCCAATGGCACTAAAGGAAGTGCAATTTTTACATTGACATCAGGAAGGGAGGAAGTTGGGAGGGAAGGGATTGGCAAGTAGGCCCAGCACTTTGTTGGACATGCCTCAAGGGCAAATCATGACCTTTTTTATAACCCAATAAAAATCATGCTAATGGGAGACAGGCAGAAATGGCAAATGAGGGTAGCGGAAAATTTTCCATCGGCAGTAAAGGAAACACCATATTCGTTATATATGTATACAAAGCAGTTCTGTCACGTCAACATTCCAAGTGGATGCTTGTCTAGTCATTAAATCCTTTGTTAATATGCCTTCTAGTTCTTGTTTTTGTGAATGGTAGTAGCAAAGGAATATTAATGATCGTTTTCTTCAGCTGCTAATCAAATTTTCTGCATCAGGTCCTGGATGAGTGTTCGGAGGCCGAGATCTGGCTAATAGAGAAACAGCAGCAGCAGGATGCTCTACCAAAGCATGCTGATCCTGTCCTCTTAATATCTGACATGAAGAAGAAAGCTGAAGCACTTGACAGGTTTGTGCGTTGATTTGTTATAATAACACACCTGATGTTAGATTGATTCTTGTCATCTTGTGTCTGAGTCAACTACCTCTAAACCTTGTTTCACAGGTCGTGCAGACCGATTATGTCAAAGCCGAAACCTGCACCGAAGCCACAGACCCCTCCTCCGCCTACGCCTCCGACTGAAAGCCCAACAACGCCTGAGCCTCAAACTCCAGAGCAGCAGCAGCAATCCAACGGTGCCGGTGAAGCTGAAGAGCCGACAAGCGAGGGAGGTGCCCAGGATCAGGAGCCTACTGCCGAGCAAATGGACACAGACAAACCTGACGGTTGGGCCGAACCATCGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019282