BGIOSGA019427

From RiceWiki
Revision as of 16:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA019427

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019427, complete gene.

LocusTag

OsI_19047

Ensembl Transcript ID

BGIOSGA019427-TA

Ensembl Protein ID

BGIOSGA019427-PA

Length

6391

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9336878..9343268

Sequence Coding Region

9336878..9337170,9337902..9338328,9338444..9339065,9339954..9339994,9340068..9340136
,9340452..9340552,9341187..9341265,9341842..9341940,9342016..9342084
,9342213..9342262,9342354..9342435,9342918..9343012,9343142..9343268

Genome Context

<gbrowseImage1> name=IndicaChromosome05:9336878..9343268 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:9336878..9343268 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGGCGGAGCTGGTGAAGAAGATACGGGAGCTGGAGGAGGGCCAGGCCGAGCTCAAGCGGGAGATATCCAGGATCGTGCCGGAGCGCGGCGGCGCGCGGCGGCCGCCGACGCTGCCCGCGCAGCAGAGGCGCACCGCGCTCCCGCAGGCGGCGGCGGCGGCGCCGTCGTCGCGGCTCCTGCAGCGCGTGGGCCGCGCCGGACTCCCCGACCGGCACTACGTCAGGATCCTGCACTCGCTGGGGCAGGCCGTGCACGTCATCTCCCTCGACGGCAAGCTCATGTATTGGAACCGGTACGCGGAGCATCTGTACGGCTATTCTGTTCCTGAAGCAGTTGGTCAGGATGCCCTTGAATTAATTGTTCATCCTAGTGACTATGGTGCAGCAAACGACATCATACAGAATATATTCATGGGGAAGTGTTGGAGAGGGAAATTTCCAGTTAAACACAAGTCAGGGGAGCGTTTCAACATCGTCGCCAGTAACACGCCTTTGTATGATGATGATGGTAGCTTGGTAGGCCTCATCTGTCTCTCAACTGATACGCGGACATTGGAGGAGATACTTGGCCATTCAACCTCAGGGAAAGTGTATCCGAGTTCAGCAAAGCCGCGCGTTCAACTCAATGGGTCCAAAAGTGGTTTGCTAAACAAAGTTTCTTGTGACTCCCAGCAACCTCTTCAATCTGCTATCACCTCCAGGATAACAAATTTGGCTACCAGGGTTACAAATAGAGTTCGCTCTCGGGTCAAGACGGGTCAGAATTGTGATAATCAGTTCGGTGGTGCCTGTGAGAGCCATTATTCTGAACATGATGCCAGAGAAGAGCAGACATCTAGTGAAGGAAGCACCCCAAGTGGGGATGTTCTTCATGGGGCCTTTGTTAGCGAAGACAATTACTCTGGGAAGTCAAGCAAAACAAACAGTGATGACTCAGGAGAAGGAAAACTGGGGCTTCACAAAATTCTTAGCTCAACAGCAGAGGCACTGTGGGCCAACAGGGGAATTCCATGGCCTTGGAGAGGTCATGGAAATGATGATGCTGGGAAGAATCGAACGAACTTGCCACAGTTCCATGAAATTCAAGAGAATGGACAGAGCCATAAGGAAGTTCCAGAGCCAATCATACTACCAGACTGCCAAGATACTGAATTTGTCCAGGAAGTCAAATATGAGGTTTCAGGTTCCTGGTGGTCTTTCAATGCCAGCACAAGTAGTATGAGCAGTACTGGAAGCACTAATAGCAGTGCTATCGAGAGAGCAGATCGTGAAGCAGACTGCCTGGATTTTGAAATTCTGTGGGAAGACCTGGCAATTGGAGAACAAGTTGGTCAAGGTTCTTGTGGAACAGTGTATCATGCTCTGTGGTATGGTTCGGATGTGGCAGTTAAAGTATTCTCCAAATATGAATACTCAGAAGACATGATACTCACCTTCAGGCAAGAGGTAGCTTTGATGAAGAAACTACGCCACCCCAATGTGATACTCTTCATGGGTGCAGTTGCGTCTCTCCAACGACTTTGCATTGTTACGGAGTTTCTGCCACGAGGGAGTTTGTTTCGCTTACTTCAAAAGAATGCTGGCAAGCTGGATCCAAGACGGCGAGTTCACATGGCTATAGACATTGCAAGAGGCATGAATTATCTCCACAATTCCAGCCCACCTATTGTCCATCGTGATTTAAAATCATCAAACCTTTTGGTCGATAAGAACTGGACTGTTAAGGTTGCGGACTTTGGTCTTTCACATCTCAAACTCGAAACATTTCTGACAACAAAAACTGGAAAAGGAACACCACAATGGATGGCTCCAGAGGTATTACGTAATGAACCTTCAAATGAAAAGTCTGATGTGTACAGCTACGGAGTTATCCTATGGGAAATTGCTACTCAGAAGATACCATGGGATAATCTCAATACAATGCAGGTTGTTGGAGCAGTGGGGTTCATGGACCACAGGTTGGACATTCCAAGCGATGTTGATCCTCATTGGGCGTCGATGATCGAGAGTTGCTGGGACAGTGACCCGCAGCGTCGCCCTTCGTTCCAAGAACTGCTAGATCAGCTCCGAGATCTGCAGAAGCAATACAACTTGCAGGCTCAACTGCAGCGAACTGCAGCTGCCAAGATGAGTGTTGACGATTGCTAA</cdnaseq>

Protein Sequence

<aaseq>MEAAELVKKIRELEEGQAELKREISRIVPERGGARRPPTLPAQQRRTALPQAAAAAPSSRLLQRVGRAGLPDRHYVRILHSLGQAVHVISLDGKLMYWNRYAEHLYGYSVPEAVGQDALELIVHPSDYGAANDIIQNIFMGKCWRGKFPVKHKSGERFNIVASNTPLYDDDGSLVGLICLSTDTRTLEEILGHSTSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQSAITSRITNLATRVTNRVRSRVKTGQNCDNQFGGACESHYSEHDAREEQTSSEGSTPSGDVLHGAFVSEDNYSGKSSKTNSDDSGEGKLGLHKILSSTAEALWANRGIPWPWRGHGNDDAGKNRTNLPQFHEIQENGQSHKEVPEPIILPDCQDTEFVQEVKYEVSGSWWSFNASTSSMSSTGSTNSSAIERADREADCLDFEILWEDLAIGEQVGQGSCGTVYHALWYGSDVAVKVFSKYEYSEDMILTFRQEVALMKKLRHPNVILFMGAVASLQRLCIVTEFLPRGSLFRLLQKNAGKLDPRRRVHMAIDIARGMNYLHNSSPPIVHRDLKSSNLLVDKNWTVKVADFGLSHLKLETFLTTKTGKGTPQWMAPEVLRNEPSNEKSDVYSYGVILWEIATQKIPWDNLNTMQVVGAVGFMDHRLDIPSDVDPHWASMIESCWDSDPQRRPSFQELLDQLRDLQKQYNLQAQLQRTAAAKMSVDDC</aaseq>

Gene Sequence

<dnaseqindica>1..293#1025..1451#1567..2188#3077..3117#3191..3259#3575..3675#4310..4388#4965..5063#5139..5207#5336..5385#5477..5558#6041..6135#6265..6391#ATGGAGGCGGCGGAGCTGGTGAAGAAGATACGGGAGCTGGAGGAGGGCCAGGCCGAGCTCAAGCGGGAGATATCCAGGATCGTGCCGGAGCGCGGCGGCGCGCGGCGGCCGCCGACGCTGCCCGCGCAGCAGAGGCGCACCGCGCTCCCGCAGGCGGCGGCGGCGGCGCCGTCGTCGCGGCTCCTGCAGCGCGTGGGCCGCGCCGGACTCCCCGACCGGCACTACGTCAGGATCCTGCACTCGCTGGGGCAGGCCGTGCACGTCATCTCCCTCGACGGCAAGCTCATGTATTGGTGAGCCTTTGTTGCTTGTTTTCTTGCTCATCAGGTGCTTGACGAAATGCTAGACTAGTTTGATGCAGAGGGTTGAAGCGAAATTTACTGAAATTAGTTTGACGGTTGAGCTGTAGTTCGTGCAATCTTGCTGCTGGGAATGGTGTATTAGTGCGGTATTCCTGGCTAATGTGATGGTACCTGCATTATGACAGTGTATAGAGAAAAATGGAGGTTTAGTGGGATGAACTCTGTTGCTAAATTCAGAATGGAGAAATACTTTTCTGTAGATGCCAGGTCTTTAATTTCAGTGACATCCTCTAGAGTTTTATTAAATTAGATAATGAGTATGGAAGTAAATTAATAGTGGAATAATTGATCAAGTGCCTACTGTGAATAGCTATGAGTGCAAGCAACTCCAAGTATCTATTCCTTCTTGTATTACTGTACAGAGAATTGCACTTGTTTTCTGGAAAAACTATTAGAATGTATGGTGCAGGACCTGAAGAGACATGTTGCAAGAATAATGGTTGTAGTTTCCTATTTCCTTATATGAATATACATCTGGAATACTTTTAAGGTAACTAAATACATAGCATTGTTCAATGCATGTAACTATATCAGATCTCATGCACAATCTTATCATTAACCTGCCTCAGCAGGCATGTTTGCTCTAAATTTCATTTTACCACAGTTTGATGCAACAAGTACAACATTCCTTACCAGATATTTCTATTTTTACTTCAACCCAGGAACCGGTACGCGGAGCATCTGTACGGCTATTCTGTTCCTGAAGCAGTTGGTCAGGATGCCCTTGAATTAATTGTTCATCCTAGTGACTATGGTGCAGCAAACGACATCATACAGAATATATTCATGGGGAAGTGTTGGAGAGGGAAATTTCCAGTTAAACACAAGTCAGGGGAGCGTTTCAACATCGTCGCCAGTAACACGCCTTTGTATGATGATGATGGTAGCTTGGTAGGCCTCATCTGTCTCTCAACTGATACGCGGACATTGGAGGAGATACTTGGCCATTCAACCTCAGGGAAAGTGTATCCGAGTTCAGCAAAGCCGCGCGTTCAACTCAATGGGTCCAAAAGTGGTTTGCTAAACAAAGTTTCTTGTGACTCCCAGCAACCTCTTCAATCTGCTATCACCTCCAGGATAACAAATTTGGTAAGTCATACCTCTGAGCAAACAAAAGAATTGACTATAATAGAAAGTCTCTTCTGGTATTTCTTCATGATTTATTTTGTAGTGTATACTTTGATTTTTAGAGTAACAAACACAGGCTACCAGGGTTACAAATAGAGTTCGCTCTCGGGTCAAGACGGGTCAGAATTGTGATAATCAGTTCGGTGGTGCCTGTGAGAGCCATTATTCTGAACATGATGCCAGAGAAGAGCAGACATCTAGTGAAGGAAGCACCCCAAGTGGGGATGTTCTTCATGGGGCCTTTGTTAGCGAAGACAATTACTCTGGGAAGTCAAGCAAAACAAACAGTGATGACTCAGGAGAAGGAAAACTGGGGCTTCACAAAATTCTTAGCTCAACAGCAGAGGCACTGTGGGCCAACAGGGGAATTCCATGGCCTTGGAGAGGTCATGGAAATGATGATGCTGGGAAGAATCGAACGAACTTGCCACAGTTCCATGAAATTCAAGAGAATGGACAGAGCCATAAGGAAGTTCCAGAGCCAATCATACTACCAGACTGCCAAGATACTGAATTTGTCCAGGAAGTCAAATATGAGGTTTCAGGTTCCTGGTGGTCTTTCAATGCCAGCACAAGTAGTATGAGCAGTACTGGAAGCACTAATAGCAGTGCTATCGAGAGAGCAGATCGTGAAGCAGACTGCCTGGATTTTGAAATTCTGTGGGAAGACCTGGCAATTGGAGAACAAGTTGGTCAAGGTAGTTATTTCTCACTTGGTAAATTTTCTGTGTACACATGTAGAAACACATTTACTTCAACACATTTGTACTCAAGCATAATCACTTTAGTTGGTTTCATGATCTCTCAATGGTCATGGTACCATGACTAGTCTTGCATATCAAGACAGGCTACACGGATGGCACTTTGCCTCCATATGGTTTTTTTTCGATAATGGAAGCTTTATTAAAACTCAGTCAAATACACCAAGATGATACATTTCAACTGAGCCCACTCCCGGCCTCTGCATAAAATGCACACAACCACACACAAAGAAAGACCTATGAAGACCCCTCTCACAAAACAGAAATATTTGTGGCTATCAATCCGTAGACTAGATCGCCAACCATGCTCCTGGGTAAAAAAAAACTCCTGTGCTACGTTGTCCAAACGTCGCGATACCACCACAATAGTATCCTGAAGACCCGGTTTGTGGAGGATAGCTCAGGTGCGAAGCCACCGGGTGACTAAAGTAATAACCTCTAGATCGTGAATTCCAAGCCCACCTTAATCTTTGGGACGACAAATAATGTCCCACTTAGCAAGCCGATATTTTTTCTTATGTCCATCCCCTTGCCAATAGAATCTAGATCGAAAGTAGTCAAGTTTCTTACATACCCCGCTAGGTATTGCAAGGAAAGACATCATATACATTTATTCTCCAAAGAGCAAATGTATATAGCCTCCATATGGTTATATCTGAAAGTTAATGGAACTTCCTTTTGTTTACTTACGAATGTTCATGTGCATAATTAGAAAAAAAATGAGGGAGAAATAATCTATTAATTGCCTGAATTGCCTGCTATATGCATACGGGCGCCGTTCTGTTTTTCTAATAGATATACTTCTTTCCATGTTTGACCAAACAGGTTCTTGTGGAACAGTGTATCATGCTCTGTGGTATGGTTCGGTATGTATGCCCCATTATGTGATTATTGAAGTAACAGTTAACAATAAATCCTGAATATTTATCATGTCCTTAGGATGTGGCAGTTAAAGTATTCTCCAAATATGAATACTCAGAAGACATGATACTCACCTTCAGGCAAGAGGTAGATATTTACTGTCCTATTGAGTCAAATAATTAGGACTGCAATTTCTTTTTCAGATTGCACACACTAGAGTTCACAGGGCTCATAGTAGTTATGTCTTTCTTTTTTTCTATGTATTGACACGGTCATATAGACAAACATGAAAAATAAGGGTGAGCTGCTGAGAGACAGAATATTTTTTTTATCTTGTGAATTGTTTTAGGCCGTAATGCCATAGAGATCAATAATATGCTCTTAGCTTTGTTTATCCTATTATTATGATTTATAATCTGTAATTATATACATAGCCCATATTTCCATCTTTCATTTGTCTAGGTAGCTTTGATGAAGAAACTACGCCACCCCAATGTGATACTCTTCATGGGTGCAGTTGCGTCTCTCCAACGACTTTGCATTGTTACGGAGTTTCTGCCACGGTATGCTTCATATCTCCTTCGACTGAAAGAATCAAGACACTGTAAAAAATTGTGTACATATTTCCCTCTGGTTGTGAATTTCTTCTTTATTGTTGTAAGAGAGGGTGTGTATTTTGAAAAAGGTATATGGCTTAATTATGATGATACAGATAACAGCAAAATTTAAATATTTATTGAGGATTCTCGATGATCTATGTCACAGTATGAAATCTAAGTAGTACCCAACATTTGTTTTTTTGTTTCCACTCTTCGCAAGCCAGGGTGATTTGAAGGACACTTTCCTGTTTAAGAAGTTAACATCTAAGACTGAACTTTCCTGTATACATATATTTTGAAAAGCTCTGTAAAATTTCCAATCCATAGATTATGTACCTGTGAGATGATTGGAGTGGGGCCATAAAATGATGAACCTGAAGTCTTGATGGTTACAGACATAGTGATGTATAATGTATTATTAACATTAGTTGTGTAGTAAGTGAACCTTTTCTTTATGGAACTTGAAGTATTACTGCGGATTTACTTGTGTTATTCTTATGTAATTGTTTCTATGCTCATAAGAGGCCAAAGCTTTCTTTCTTCTTTCTTTTTTTTGCCTACCTTTACTTTACACCAAAAACTGTACCACATAATGCAGAGGGAGTTTGTTTCGCTTACTTCAAAAGAATGCTGGCAAGCTGGATCCAAGACGGCGAGTTCACATGGCTATAGACATTGTGAGTGCATTTTCTCTTAAAAGCTCGTTCTAAAAATGGCCAGTACATTATGTTCTGCGGAACATCTGTGGCATGAGCAGATTGTAACAAAAACTGGATGAACATTCTTCACCTGAAGAAATCAAGAGAAGTTTTTTACTGTTATGGAATTATTTTCACAAATGTGTAGAAAAAAAAGCTGAATTGTGTGTGACTAAACCATGTCTTTAAGATTCAGCATGTGAAATGATGAAATGCAAAAAATAAAATGATATCATATATGTTCCATCTAACAAAGTTGCTTCTTCTATTTCCCCGCAAAAAAGGCTGCTTGTTCTATATTATACATTCCATTACTATGATTTAACTGAGGATTCTATCACTGAAATCCAATCAATAATTGAACTGATATGATTATGATGTGAATTATTGTTGTTCCAACCAACTTTTGTATCATTCTTATTCTTGTTGAGGCTTTGGAACTACAGGAATAATATATTGTGACTCCAAATTTTGTTCAATAATTACATATTTTGCCTGTGTAGAAACTTCGATTACCATGTTGTGTTTCAGAACATAACTTATATATTTCTGCAGGCAAGAGGCATGAATTATCTCCACAATTCCAGCCCACCTATTGTCCATCGTGATTTAAAATCATCAAACCTTTTGGTCGATAAGAACTGGACTGTTAAGGTAAATCCGAAAGTTAGTTCTTTCTTCATATCTTTTATGTATTAATTATCTTCTCATTGTTTTTAATTTTATCAGGTTGCGGACTTTGGTCTTTCACATCTCAAACTCGAAACATTTCTGACAACAAAAACTGGAAAAGGAACAGTAAGTGCAAGCAAGCTCTACTTAATTTCACATGGATTCTCCGGACTGACAAGACTTAGATAAATTTTAAATTTGTGCTAATGTTTTCTGTTTATTGCAAAATATCTTATTTTTGTTTTGATATTCAGCCACAATGGATGGCTCCAGAGGTATTACGTAATGAACCTTCAAATGAAAAGTAAGTTCACCGTTCAGAATTGCTCAACATAATTTCTCTGACTATCCATAGGTGGTTTGCTCAATTTTGTTTTCCTTTTCATAAAGCATAGGTCTGATGTGTACAGCTACGGAGTTATCCTATGGGAAATTGCTACTCAGAAGATACCATGGGATAATCTCAATACAATGCAGGTACATTTTGGCAATGTATTTGTCTGTTGGTTAGTTTATTCATCAGAGTTTTTTTATCATATTATTCGTTGAAAAACTATGCAGTTGTGAATTCGATAGCATAATTTACTTATAGCATATAAAAAAAGCAAACCTCAATAATATAATTGTGTACTGGTGGTGATATTAGGACTTAACAGCCGTTTGCAAGTTGCAACAACATATATCTTTCATCATGTGTTTGGGTGCACTGGTCATTGTCTAAATTTATCTGCACATAGTTTTCCTGTTTCAGACTATGCTTGTCAGTTTGCTGTTGCTAAAAAAAAAAGACCATATTATCTTGTCAAAATGGTCCTCATTGTCAGGATAGGATAAGAGAAGTCCATAAATACCATCTCTGCAATTTATACATAAGTATTAGCAATGTGTCTAATTGAACTGTTGGTAAAGCATTACTAGAACATGAAAGATTCCTAACAGTGTGATCCCAAATGTTGCAGGTTGTTGGAGCAGTGGGGTTCATGGACCACAGGTTGGACATTCCAAGCGATGTTGATCCTCATTGGGCGTCGATGATCGAGAGTTGCTGGGACAGGTGCACATACTATATATATTTTTTCGACATTTCAACATACTACTTCTTTGCAAATTCCGAAGAAACAACTGTTCTCAATGTAAAACAACTGATCCTAGTATTCAACAAACCTATCCTTTCTGCGAGCAGTGACCCGCAGCGTCGCCCTTCGTTCCAAGAACTGCTAGATCAGCTCCGAGATCTGCAGAAGCAATACAACTTGCAGGCTCAACTGCAGCGAACTGCAGCTGCCAAGATGAGTGTTGACGATTGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019427