BGIOSGA018490

From RiceWiki
Revision as of 16:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018490

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018490, complete gene.

LocusTag

OsI_19052

Ensembl Transcript ID

BGIOSGA018490-TA

Ensembl Protein ID

BGIOSGA018490-PA

Length

3039

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9394134..9397172

Sequence Coding Region

9396720..9397172,9396090..9396202),complement(9395831..9395961,9394302..9394720),complement(9394134..9394190

Genome Context

<gbrowseImage1> name=IndicaChromosome05:9394134..9397172 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:9394134..9397172 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGACAATGGTTCTTCCCCTTATCGGCCAGATCATCAGCATTGCAAAGGATCTCGCGGCGGCGGCGCGGACGGCGAAGCAGAACAGGAGCAGGTGCCAGAGGCTCGCGCGCGACGCCGAGATGATCGTCGAGCTGCTGGAGGAGGAGCAGAGGCGCTCCTCGGGGTCCGAGTGGGCGTCCGCCGCCGCTCACGAGAGTGCGGCGGCGAGGTTGCTGCTATGCAGGCTGAAAGACGGCATCGACGACGCGCTCAAGCTCGTCCAGTCCTTCGGCAGCCGCGGCCCGGTCGACCGCTTCTTCCATGGGAGAAGCCTGGCAGGCAAGCTCGAAAATGTTCATGAGGAGATCAACAGCTGCCTCAGGCTGTACCATCTTGCCAACCGTACACTCCTGTACCATAACATCAAGCTATTAGAAGAAATAATATGTTCCCTGCTCCGACCGGAGGAAGGAAAGGAGTTGCGGAGGACGTTGAGCAGTCCCTCTATCCCTAAGGATTGGTCCGACGACAAAAAAGAAGTCTTCATGTGGTTTATTAGTCATTCCAATCAAGATAACAAGTTTCAAATTAAGGGAAAGTTTGAAAGAAATCAACCTGTTAATAATGCCATAGAGATACCAGCTGGAAACGTTGAAAAGCACGCGGGTCCTTATGATGGGAAAGGCTCCGAACTAAACATCGTTTCACAAGATGTAGCTACTGCTGAAAATAATTCAGCTACAGAAATCGTGGAGGAACTGCGAAAGCTTGCCGAGATGGTTATCAAAACCAACCACGCCATGAAGAAGTGGCTACCGCTTGTGCGAAGTGCGAAGCTGATCCTTGACTTCATGAACTACCTCCAAGGTCTTGGGATGACGGCGCAGGACGTGGCGTCGCTGAACCAGCTGACCAGGCTCAAGAGGCTCCTCGGCAATGCGTACAATTACCTTACCATGTACAGCCAGAGCGGCTGGACCACAATCAGCCGCTTTGGTAGGAGCTCGAGGAGGATAGATGAACAGATCACAGACGCCCAGAACAAGATCGACCTCTACCTCGAGCAACTACCCGCTGTTAGCCATAGCCAGATGTCCGGTCTCCTCGGAGGCATCCTCCGCAGTTCAGAGAGTCACGACATGAAAATGTTGCAGGAGCTTTTCAAGACATTCCGGAAGACCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MAETMVLPLIGQIISIAKDLAAAARTAKQNRSRCQRLARDAEMIVELLEEEQRRSSGSEWASAAAHESAAARLLLCRLKDGIDDALKLVQSFGSRGPVDRFFHGRSLAGKLENVHEEINSCLRLYHLANRTLLYHNIKLLEEIICSLLRPEEGKELRRTLSSPSIPKDWSDDKKEVFMWFISHSNQDNKFQIKGKFERNQPVNNAIEIPAGNVEKHAGPYDGKGSELNIVSQDVATAENNSATEIVEELRKLAEMVIKTNHAMKKWLPLVRSAKLILDFMNYLQGLGMTAQDVASLNQLTRLKRLLGNAYNYLTMYSQSGWTTISRFGRSSRRIDEQITDAQNKIDLYLEQLPAVSHSQMSGLLGGILRSSESHDMKMLQELFKTFRKTM</aaseq>

Gene Sequence

<dnaseqindica>1..453#971..1083#1212..1342#2453..2871#2983..3039#ATGGCGGAGACAATGGTTCTTCCCCTTATCGGCCAGATCATCAGCATTGCAAAGGATCTCGCGGCGGCGGCGCGGACGGCGAAGCAGAACAGGAGCAGGTGCCAGAGGCTCGCGCGCGACGCCGAGATGATCGTCGAGCTGCTGGAGGAGGAGCAGAGGCGCTCCTCGGGGTCCGAGTGGGCGTCCGCCGCCGCTCACGAGAGTGCGGCGGCGAGGTTGCTGCTATGCAGGCTGAAAGACGGCATCGACGACGCGCTCAAGCTCGTCCAGTCCTTCGGCAGCCGCGGCCCGGTCGACCGCTTCTTCCATGGGAGAAGCCTGGCAGGCAAGCTCGAAAATGTTCATGAGGAGATCAACAGCTGCCTCAGGCTGTACCATCTTGCCAACCGTACACTCCTGTACCATAACATCAAGCTATTAGAAGAAATAATATGTTCCCTGCTCCGACCGGAGGTAATACTACCTCCCTCCACTCCTTTTCAATTTCTGTATTTTGATATTTCAGAGATGGCTTATTGACTTTATAATCACAACATTTATGGTACTAAATATGTAGTTTTCAGATGCTCTACCTTAAATATATATAGTTACGTACGTGATAAATTTGATGTTTAAATATATGTATATATAGTTTGTGATTTATCATTTAAAATTTGTAGTTTTGTTATAGTTGCGTTAAAATTAAGTATATATCTGCTTTCAATTAGTATACAACGATACAATTATAGTACTACAAAATATTTTTAACAGCTAGCAATGCAGTCAATTTATTTATAATAATATCCTAATTAATGGCTATTTACTTGAGATATCTATATATGGCTTGAGACTAACATAAATTGACAAGATCGAATATATAAAACATGTATTAGAATAAATAAAAAAAAAGGTATAGAAACAGATGAAAAACGTACACATTGCTCTTAGGAACTTTATATATAGATATAAAAAAAATGTTATCTTATATCAGGAAGGAAAGGAGTTGCGGAGGACGTTGAGCAGTCCCTCTATCCCTAAGGATTGGTCCGACGACAAAAAAGAAGTCTTCATGTGGTTTATTAGTCATTCCAATCAAGATAACAAGTAAGATAGTAGAAATATTATTCTCCCCCTTTTTTTTAACAAAGGGCAGAAAAAGACAATTACAAATAAACGTGCATTGAGAACTAATTTAATAAATTAAGGGTTTTTGTTTCTTTCTTTTGTGGCAGGTTTCAAATTAAGGGAAAGTTTGAAAGAAATCAACCTGTTAATAATGCCATAGAGATACCAGCTGGAAACGTTGAAAAGCACGCGGGTCCTTATGATGGGAAAGGCTCCGAACTAAACATCGTTTCACAAGGTAAAATTTTATCAATTACCATAGGCTCAATTTCCATTCATATGCAATTAAAATAGAGAAAATTTGGCGTGAAGTATTCGTCTAGCACAATAAAAAAGGGTGACCACAAATAGTATCATAGGCATAGAATACATCGGATGCACATTTCCTAAAAGTGATATATATCCCAAAATAATTGTATAGTTAGAATAAAATTTCCAAACCAGTTACCTTTCTAGCTAGCTGCCCACATCACACCCCTTAGGATTAAAACAATTGGAGTATCAAACTTGAAGATCAATTTGAGATTTAATTTCTCCTATCCTCTGATGGGGATATACTTGAGATATATCTCTCCATGAAGGGAGGTACCAAAATTAAAGTCATAGAATGGAAAAGGTTGGTCGTTGTATATGTTATTGACTTTTTCTTACAATTTTACAGGTATAGATATTTCGGTTACCTAACAATATGCAGTGCATATACCTCTCTACTCTCTATAGCACCCAAGGACCAGAAAATTCATTGCCAATGTACAAACTTGTTTTCTAATCAGTTCAGTTGGTTTAAGTTTTTACCCCTCAAATAATAGTTACCTACATACTTTCCAAGGATCAGAGAAAACCTCAAATCTTGCACAAATCCAAATGAAACATATCTAAGAAGCACAACTGAGAATGCACCCGCACCCTAACCACAATATTATTTTTGTAATAAACCACCTGTTAGATGAAAACAACATCCCATTTTGGAAATTTCAGGACAGATACCAACGGTGAAAACTACTCCCCCTGTTCATAAGTAATAGCATTTTGAGAATTTGAATTTTTTTTCACAAATATAAGCATTTAGAGAGTACTACTCGTTCCATCAACCACCATTCTATTTTAATATTTTTTTTCATCTTACTCCAGGCCCCAACCCCATCCCAAATTTAACAGTAGACATCAAAGTCTTAATATTTGATAAACAACCATCAAAGTTTTCGATATTGAAGTCATTCTCCTCGAGTCGGTTTTGACCACAAGAAAACTTTTGCAGTTTCTTAGCTTGTCCATTGAAAACAATTGTTTTCCTTGTTCTCAAATTTCTCCGAAAATCCTGCTAACAACTCCACATTTGCACGCGCAGATGTAGCTACTGCTGAAAATAATTCAGCTACAGAAATCGTGGAGGAACTGCGAAAGCTTGCCGAGATGGTTATCAAAACCAACCACGCCATGAAGAAGTGGCTACCGCTTGTGCGAAGTGCGAAGCTGATCCTTGACTTCATGAACTACCTCCAAGGTCTTGGGATGACGGCGCAGGACGTGGCGTCGCTGAACCAGCTGACCAGGCTCAAGAGGCTCCTCGGCAATGCGTACAATTACCTTACCATGTACAGCCAGAGCGGCTGGACCACAATCAGCCGCTTTGGTAGGAGCTCGAGGAGGATAGATGAACAGATCACAGACGCCCAGAACAAGATCGACCTCTACCTCGAGCAACTACCCGCTGTTAGCCATAGCCAGATGTCCGGTCTCCTCGGAGGCATCCTCCGCAGTTCAGAGGTGCAGCATTGCATATCTTTTTCATGTATACATATTTGTTGGATCTTGACCAGTACGTGATATGAGGCAACTTGTATTGAGCTCATTTCTATGTGTGTTTATTTTGCACAGAGTCACGACATGAAAATGTTGCAGGAGCTTTTCAAGACATTCCGGAAGACCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018490