BGIOSGA019646

From RiceWiki
Revision as of 16:26, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA019646

Description

Os05g0343400 proteinPutative WRKY transcription

Definition

Oryza sativa Indica Group BGIOSGA019646, complete gene.

LocusTag

P0015F11.10

Ensembl Transcript ID

BGIOSGA019646-TA

Ensembl Protein ID

BGIOSGA019646-PA

Length

1871

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16830683..16832553

Sequence Coding Region

16830683..16830994,16831108..16831272,16831371..16831831,16831931..16832107,16832205..16832553

Genome Context

<gbrowseImage1> name=IndicaChromosome05:16830683..16832553 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:16830683..16832553 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCGACGGGGGGGTTGGACCACGGGTTCACGTTCACGCCGCCGCCGTTCATCACGTCGTTCACCGAGCTGCTGTCGGGGGGCGGTGGGGACCTGCTCGGCGCCGGCGGTGAGGAGCGCTCGCCGAGGGGGTTCTCCAGAGGCGGAGCGAGGGTGGGCGGCGGGGTGCCCAAGTTCAAGTCCGCGCAGCCGCCGAGCCTGCCGCTCTCGCCGCCGCCGGTGTCGCCGTCGTCCTACTTCGCCATCCCGCCGGGGCTCAGCCCCACCGAGCTGCTCGACTCCCCCGTCCTCCTCAGCTCCTCCCATATCTTGGCGTCCCCGACCACCGGTGCAATCCCGGCTCAGAGGTACGACTGGAAGGCCAGCGCCGATCTCATCGCTTCTCAGCAAGATGACAGCCGCGGCGACTTCTCCTTCCACACCAACTCCGACGCCATGGCCGCGCAACCGGCCTCTTTCCCTTCCTTCAAGGAGCAAGAGCAGCAAGTGGTCGAGTCGAGCAAGAACGGCGGCGCCGGCGCGTCGAGCAACAAGAGCGGCGGCGGCGGGAACAACAAGCTGGAGGACGGGTACAACTGGAGGAAGTACGGGCAGAAGCAGGTGAAGGGGAGCGAGAACCCGAGGAGCTACTACAAGTGCACCTACAACGGCTGCTCCATGAAGAAGAAGGTGGAGCGCTCGCTCGCCGACGGCCGCATCACCCAGATCGTCTACAAGGGCGCACACAACCACCCCAAGCCGCTCTCCACCCGCCGCAACGCCTCCTCCTGCGCCACCGCCGCCGCCTGCGCCGACGACCTCGCGGCGCCCGGCGCGGGCGCGGACCAGTACTCCGCCGCGACGCCCGAGAACTCCTCCGTCACGTTCGGCGACGACGAGGCCGACAACGCATCGCACCGCAGCGAGGGCGACGAGCCCGAAGCCAAGCGCTGGAAGGAGGATGCTGACAACGAGGGCAGCTCCGGCGGCATGGGCGGCGGCGCCGGCGGCAAGCCGGTGCGCGAGCCGAGGCTTGTGGTGCAGACGCTGAGCGACATCGACATCCTCGACGACGGCTTCCGGTGGAGGAAGTACGGCCAGAAGGTCGTCAAGGGCAACCCCAACCCAAGGAGCTACTACAAGTGCACGACGGTGGGCTGCCCGGTGCGGAAGCACGTGGAGCGGGCGTCGCACGACACGCGCGCCGTGATCACCACCTACGAGGGCAAGCACAACCACGACGTCCCGGTCGGCCGCGGCGGCGGCGGCGGACGCGCCCCGGCACCGGCGCCGCCGACGTCGGGGGCGATCCGGCCGTCGGCCGTCGCCGCCGCCCAGCAGGGGCCCTACACCCTCGAGATGCTCCCCAACCCCGCCGGCCTCTACGGCGGCTACGGCGCCGGCGCCGGCGGCGCCGCGTTCCCGCGCACCAAGGACGAGCGGCGGGACGACCTGTTCGTCGAGTCGCTCCTCTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MASSTGGLDHGFTFTPPPFITSFTELLSGGGGDLLGAGGEERSPRGFSRGGARVGGGVPKFKSAQPPSLPLSPPPVSPSSYFAIPPGLSPTELLDSPVLLSSSHILASPTTGAIPAQRYDWKASADLIASQQDDSRGDFSFHTNSDAMAAQPASFPSFKEQEQQVVESSKNGGAGASSNKSGGGGNNKLEDGYNWRKYGQKQVKGSENPRSYYKCTYNGCSMKKKVERSLADGRITQIVYKGAHNHPKPLSTRRNASSCATAAACADDLAAPGAGADQYSAATPENSSVTFGDDEADNASHRSEGDEPEAKRWKEDADNEGSSGGMGGGAGGKPVREPRLVVQTLSDIDILDDGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDTRAVITTYEGKHNHDVPVGRGGGGGRAPAPAPPTSGAIRPSAVAAAQQGPYTLEMLPNPAGLYGGYGAGAGGAAFPRTKDERRDDLFVESLLC</aaseq>

Gene Sequence

<dnaseqindica>1..312#426..590#689..1149#1249..1425#1523..1871#ATGGCGTCCTCGACGGGGGGGTTGGACCACGGGTTCACGTTCACGCCGCCGCCGTTCATCACGTCGTTCACCGAGCTGCTGTCGGGGGGCGGTGGGGACCTGCTCGGCGCCGGCGGTGAGGAGCGCTCGCCGAGGGGGTTCTCCAGAGGCGGAGCGAGGGTGGGCGGCGGGGTGCCCAAGTTCAAGTCCGCGCAGCCGCCGAGCCTGCCGCTCTCGCCGCCGCCGGTGTCGCCGTCGTCCTACTTCGCCATCCCGCCGGGGCTCAGCCCCACCGAGCTGCTCGACTCCCCCGTCCTCCTCAGCTCCTCCCATGTGCGTTCCGCGTGACACACCTTCATCTTCTTCTTCTACCTTTAGTGCGCAATTGCTGTGTAGTGTGGTGCTGATGATGATCCATGGCGTTTGTGCGTGTTTGTGCTTTTCAGATCTTGGCGTCCCCGACCACCGGTGCAATCCCGGCTCAGAGGTACGACTGGAAGGCCAGCGCCGATCTCATCGCTTCTCAGCAAGATGACAGCCGCGGCGACTTCTCCTTCCACACCAACTCCGACGCCATGGCCGCGCAACCGGCCTCTTTCCCTTCCTTCAAGGTACGTACAAATGCTTCAGCTCATCTAGCTCAACCCAAGCTGAATAAACTGTTGACAGTCTAGCTCACCATGGTTCATGTACGCTTGTGCTGGAGCAGGAGCAAGAGCAGCAAGTGGTCGAGTCGAGCAAGAACGGCGGCGCCGGCGCGTCGAGCAACAAGAGCGGCGGCGGCGGGAACAACAAGCTGGAGGACGGGTACAACTGGAGGAAGTACGGGCAGAAGCAGGTGAAGGGGAGCGAGAACCCGAGGAGCTACTACAAGTGCACCTACAACGGCTGCTCCATGAAGAAGAAGGTGGAGCGCTCGCTCGCCGACGGCCGCATCACCCAGATCGTCTACAAGGGCGCACACAACCACCCCAAGCCGCTCTCCACCCGCCGCAACGCCTCCTCCTGCGCCACCGCCGCCGCCTGCGCCGACGACCTCGCGGCGCCCGGCGCGGGCGCGGACCAGTACTCCGCCGCGACGCCCGAGAACTCCTCCGTCACGTTCGGCGACGACGAGGCCGACAACGCATCGCACCGCAGCGAGGGCGACGAGCCCGAAGCCAAGCGCTGGTAAGCCTCACATCATCACTCAAATCAGCAATCGAAGCGTAATATCTCCATGCGTGTGCGTGTGTTCTTCTTGGGTCTCATGGATGTCATGGTTTTCAGGAAGGAGGATGCTGACAACGAGGGCAGCTCCGGCGGCATGGGCGGCGGCGCCGGCGGCAAGCCGGTGCGCGAGCCGAGGCTTGTGGTGCAGACGCTGAGCGACATCGACATCCTCGACGACGGCTTCCGGTGGAGGAAGTACGGCCAGAAGGTCGTCAAGGGCAACCCCAACCCAAGGTAATCAATCAATCAAGCTGATCAAAATCCGTCGATTAGTCGATTAATCATATCTGTTCTTGCGTCTCTAATAATCAAATCTGTTCTTGAATCGCAGGAGCTACTACAAGTGCACGACGGTGGGCTGCCCGGTGCGGAAGCACGTGGAGCGGGCGTCGCACGACACGCGCGCCGTGATCACCACCTACGAGGGCAAGCACAACCACGACGTCCCGGTCGGCCGCGGCGGCGGCGGCGGACGCGCCCCGGCACCGGCGCCGCCGACGTCGGGGGCGATCCGGCCGTCGGCCGTCGCCGCCGCCCAGCAGGGGCCCTACACCCTCGAGATGCTCCCCAACCCCGCCGGCCTCTACGGCGGCTACGGCGCCGGCGCCGGCGGCGCCGCGTTCCCGCGCACCAAGGACGAGCGGCGGGACGACCTGTTCGTCGAGTCGCTCCTCTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019646