BGIOSGA037469

From RiceWiki
Revision as of 18:35, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037469

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037469, complete gene.

LocusTag

OS12G0512000

Ensembl Transcript ID

BGIOSGA037469-TA

Ensembl Protein ID

BGIOSGA037469-PA

Length

6836

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15979086..15985921

Sequence Coding Region

15979086..15979811,15981375..15981623,15981927..15982049,15985691..15985921

Genome Context

<gbrowseImage1> name=IndicaChromosome12:15979086..15985921 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:15979086..15985921 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAACCTCGCAACAAGATGGCGGCGGCGAGAGGCTGTTTCACGGCGGCGCCGGAGATGGAGACGGAGACGGTGCGGCGGTGGCGGCGGCGGCGAGGCAGGTGTGGGTGCCGGGGCCGGTGATCGTGGGGGCGGGGCCGTCGGGGCTGGCGACGGCGGCGTGCCTGAAGGCGCGCGGGGTGCCGTCGCTGGTGCTCGACAAGGACGCCACCGTGGCGGCGTCGTGGCGGGAGCGCACGTACGAGCGCCTCCGCCTCCACCTCCCGCGCGGCTTCTGCGAGCTCCCCCTCGCGCCGCCGTTCCCGCCGGGGACGCCGCCGTACCCGACGCGGGACCAGTTCGTCGCCTACCTCGACGCCTACGCCCGCGCCTTCGCCGTCGAGCCCCGCCTCGGGTCCCGCGTCCGCGCCGCCTCCTACGACGCCGCCATCGGCTTCTGGCGCGTCGCCGCCGTCGACGAGGCCGGCGGCGGAGGCGCCGGAGGCGAGACGGAGTTCCTGTCGCGGTGGCTGGTGGTGGCCACCGGGGAGAACGCGGTGGCGGCGTGGCCGGCGGAGGGCGTGGGCGCCTACCGCGGCGACGTGATGCACACCAGCAGCTACAAGAGAGGGGACGAGTTCGCCGGGAAGAAGGTGCTCGTCGTCGGCTGCGGCAACTCCGGCATGGAGGTCAGCCTCGACCTCTGCAACAATGGCGCCGCCACCTCCATGGTCGTCAGGGACAAGATTCATGTTCTGCCTAGGGAGATTCTGGGCATCTCAACATTTGGCCTCTCAGTGTTCCTTCTCAAGTGGTTTCCCATAAAATGGGTTGATGCTTTACTACTCATTTTCTCGAGATTGATCCTTGGAAACATTGAGAAATACGGCCTCCGACGACCTAAGATTGGTCCACTCCAGATCAAGTGCTCTACCGGGAAAACACCGGTGCTTGACATCGGCGCTCTTAAAAAGATCAAGAACGGCGAAATAAAGGTGGTCCCAGCAATACACTGCTTCACAGAGGATGGGGTCGAATTCGTGAATGGCTGTAGGGAGGACTTTGATGCCGTCATCTTTGCCACTGGATACAAAAGCAATGTGCCATCATGGCTCAAGGAGGAGGAGTTCTTCAGCGAGAGCGACGGGTTCCCGAGGAAGGCGTTCCCGCACAGCTGGAGGGGGAAGAACGGCCTCTACGCCACCGGATTCACCAAGAGGGGCCTCCAGGGCACCTCCTACGACGCCGCCATGATCGCCGCCGACATCGCCCGCCGCTGGACCAAGTCCCTCGCCGGCCCTACTGCCGCCGCCGACGCCGACCACCATGAGACATACATAGCTAATTAA</cdnaseq>

Protein Sequence

<aaseq>MPTSQQDGGGERLFHGGAGDGDGDGAAVAAAARQVWVPGPVIVGAGPSGLATAACLKARGVPSLVLDKDATVAASWRERTYERLRLHLPRGFCELPLAPPFPPGTPPYPTRDQFVAYLDAYARAFAVEPRLGSRVRAASYDAAIGFWRVAAVDEAGGGGAGGETEFLSRWLVVATGENAVAAWPAEGVGAYRGDVMHTSSYKRGDEFAGKKVLVVGCGNSGMEVSLDLCNNGAATSMVVRDKIHVLPREILGISTFGLSVFLLKWFPIKWVDALLLIFSRLILGNIEKYGLRRPKIGPLQIKCSTGKTPVLDIGALKKIKNGEIKVVPAIHCFTEDGVEFVNGCREDFDAVIFATGYKSNVPSWLKEEEFFSESDGFPRKAFPHSWRGKNGLYATGFTKRGLQGTSYDAAMIAADIARRWTKSLAGPTAAADADHHETYIAN</aaseq>

Gene Sequence

<dnaseqindica>1..726#2290..2538#2842..2964#6606..6836#ATGCCAACCTCGCAACAAGATGGCGGCGGCGAGAGGCTGTTTCACGGCGGCGCCGGAGATGGAGACGGAGACGGTGCGGCGGTGGCGGCGGCGGCGAGGCAGGTGTGGGTGCCGGGGCCGGTGATCGTGGGGGCGGGGCCGTCGGGGCTGGCGACGGCGGCGTGCCTGAAGGCGCGCGGGGTGCCGTCGCTGGTGCTCGACAAGGACGCCACCGTGGCGGCGTCGTGGCGGGAGCGCACGTACGAGCGCCTCCGCCTCCACCTCCCGCGCGGCTTCTGCGAGCTCCCCCTCGCGCCGCCGTTCCCGCCGGGGACGCCGCCGTACCCGACGCGGGACCAGTTCGTCGCCTACCTCGACGCCTACGCCCGCGCCTTCGCCGTCGAGCCCCGCCTCGGGTCCCGCGTCCGCGCCGCCTCCTACGACGCCGCCATCGGCTTCTGGCGCGTCGCCGCCGTCGACGAGGCCGGCGGCGGAGGCGCCGGAGGCGAGACGGAGTTCCTGTCGCGGTGGCTGGTGGTGGCCACCGGGGAGAACGCGGTGGCGGCGTGGCCGGCGGAGGGCGTGGGCGCCTACCGCGGCGACGTGATGCACACCAGCAGCTACAAGAGAGGGGACGAGTTCGCCGGGAAGAAGGTGCTCGTCGTCGGCTGCGGCAACTCCGGCATGGAGGTCAGCCTCGACCTCTGCAACAATGGCGCCGCCACCTCCATGGTCGTCAGGGACAAGGTGTATACTTTTACGTTGCGCACGTGTTTGCTACTGTTAAGTTGTTGCGTAATTAATTATTATTGCACTCACAAATTAACTTAGTAGTACAAACTTATTAATTACTCCTTCTAAAACTTGTCGTTTTGTATGAGGGTTGGGTCAAACGACTTTTAAAACATGTGACTACGAATAATTTCTACTCCGTATAATATTTGTCTTAGAAATATGAAAACCATATATATGTTTAAAAAGTACTTCAATAAAATCATATATATATATTTGTTGATAATATAAAACAGTGGTCAAAGTTGCTTTTTAATACTAAGTGCCCTATTATTAACCTGGAGGGGAGTAACTGGAGTAACTGTTTAGCTTCAGAAAATTAACTTGAAAAGTTTGCCAAGTTACCCTAAAATTTTGTACTGGACTGCTAGTTTCAAATTTTTTACTGTCTAAACTGTCTAAAAGCTAATTTAAAGCTATATTTCGTATAGAGGTCGAAATTATTGCTTGGAGTAGTTGAAGCGTGCTAGAAGACAAATTAAGAAAATAAAAGACCATATAATCACAAAATATAAAAGAAAATACATCGTCATCGCATTTTTCCCTCCAAAGCAACAGCCAGCTTTCTAAATAGAGAGTCCATGTTTTCTTATGTTAGTATTGAGGCCATATACTATAGAAGTTTTGGAACCAAAACTTCAAATAAATTAGGTATATCTACCAAAATACACTTTTGCAATTTATTTTCTCGTTTTAGGGGCACCACAGAGCAAACCTAGCATTTTCAGTTCCCAGGGTGTAATTCTGTGTGGTCAATTTATTCCGTCGCGCCACGTGTCTTTCCTTTCTGCCTCCCTTCTATAAAGAATCGTTGTCACTTTCATAGCAGAAAAACCATAATATATCATTTTCTGGAAAATTCACATGAATGACAGTTGCTTGCAGCAAAATTTAGTAAACATTGAGAGATTTTTTTTTCATTCTCACAAAATTTCTTATCATACATACATGCTTGTGTGCATCATATGTTTGTGCTACTTGCAATTGTAGCTTGCTGTTACATAGAAATACGCACTGATGTGGTGCCACATTGCCCCGTAAACTTCCCTTTCCTTATCTTGCACACCGCACAGGGGAGACAGAGAAAGAACAAGGGAAAATTACAACGACAGTGACAAGGGAAAAGAAAAGAAAAAAAAAATCAGAATTTGAGCTAGAATGCTCGAGAAACTAGATTATATACAGTGCCTAGCATGAATGTTTATGAATTTTCCTTCCCTTTTCTTATAGTGAAAGCAAGAGATGATGCTAATAATATTATTGATCACTATACGAGATTGGGTAAGTAGTGAGTCAAAATTACATGATCTAATTAAATTTAACGTAGCAATGCATTGGACAAATTAATTTCATCCCTGAAATATTGATATGTTGTGAATGAATAAAATATAGAAAAACCAATATATAGTTTTCACCATATATACATACTAGCTAAGAGTTTAGGCCGCTTTTTGTACTATGGATTTCAATATATGTGTATCCTTAATTATTCAACATTTTTTGTGGGTAAATTTGCAGATTCATGTTCTGCCTAGGGAGATTCTGGGCATCTCAACATTTGGCCTCTCAGTGTTCCTTCTCAAGTGGTTTCCCATAAAATGGGTTGATGCTTTACTACTCATTTTCTCGAGATTGATCCTTGGAAACATTGAGAAATACGGCCTCCGACGACCTAAGATTGGTCCACTCCAGATCAAGTGCTCTACCGGGAAAACACCGGTGCTTGACATCGGCGCTCTTAAAAAGATCAAGAACGGCGAAATAAAGGTAAATTATACAACTCATTATATACAAATCCCTCCCCCCCCCCTCCCACCCAATGATCATGCAAGCTCAACTAACAATATAATTCACTAAAAGAACAAACTAAATAACTAAAAACTGAACAGATCACATGATGGAATTAACAAGAGAAGCTATATAGTATAAACACCCAACCATTTGTACAACAAACATGAAGTAAAGAAAGATTTTTTGTCTTGCAGTGATGTAGGTCAGTGTACTATATGTTGTTTAATGATGTAGTGCAATGTCCTACCAAGTGAATCTAGAATGAGATTCTCTCTGCAGGTGGTCCCAGCAATACACTGCTTCACAGAGGATGGGGTCGAATTCGTGAATGGCTGTAGGGAGGACTTTGATGCCGTCATCTTTGCCACTGGATACAAAAGCAATGTGCCATCATGGCTCAAGGTACGCATGCACACCTAAATTCTTTATGTTCCACCAGTTTTTCTCGGCATCCTTTAATTTAGATGGCACATAACTATGTTGCGAATGATGCTACAAAGGGATTCACAAATTTAGCCAAATAATACTGCGAACATAGAGATATGTTTTTCGTCGTGCATAAATTCAATACACGGGACATATGTACATGGTCGCTCTGGTCAATAAACATCTATTAGAGATGTTTTATATTTAAGTTGTAAAAAACTTTGAACATTAGTTTATCTAGTAAAATATTTTGATTGGATTGACGCACATAAAATTGATGGGCAGCATGCATGCATGAATGATTGAGTGATTGACTGACTTATGTTTTATTTATATATGATGCATGGGGAGTACATATATATAGATCATGGAAATCACAAAGCAATATATATGCACTGTACACTTTCACATCAGAGATTGACCCTATGCTTGTATACATATGGTCTATGCCACCCTAATCAAGGTATTAGATAGCTAGGGATGGGCAATGACAATGATACTAAGAAGGGGGTGATATCCCTCCTAGATGGAGACATGGAAATTCATCCAAAAAATGACAATCAATAGCCAATTTTGCTTCAAAGATAGGAATGAACCATAGTTGTCACCTCGATCTTTAGATTCTAAGGTGAAAAATAATTGATCTAGGTAGATATAGGAGAGGACATATATGTCTTTTCAGTTTTCATCGCGCATGTGTGTGCGCGTGCGCGCGATCGAGATGATAGCTACTAGTCTTGTACTTCCCATTTGTATCTTGATACGTATATATCATTGAGTGTATGTAGACATGGACATGTCTAGGGTAGGGTTGTCATGTCAGCTTGTCAATGTTTTGATCGTGAGAACTATAGCTATATAGCTAGCTAATTGATTGAGGATTGGGATGCATGGGCGGCTCTTAGCTCTAGCTAGCTCTTGCATGTTCCTCTCAATCTCATGTGTATGTATATGTATGTATTTTGTTTGTTGTTGTGTTGTTGTTGGTGCTGTGTGAGATGGTCCGACAGTGGAGCCCATGTATATATATGTTGGCATTGATTTGGACCATATGCAATAGCGACTAGGCATATATGCAAAAAGAAGAAAAATAGAAATGGTTTTCATGGATGTGTTTTATACTTTTGTTCCATTCTCAAACAAAGCATGCATGCCTAATTGCTTTGCATCATGCAAGATAGTTTAGAGAAATGAAGATTTATACATATATATGCAAACTTCCAAATATATAATAATACTCATATAGTGTTTCACAATTTGTTTTCATGTTTTTCATGCTAAAGAGACAATTTTATGGTCTTGGAAGAACCATTAGCCACAAAGAGAATTATTGATCACATGGCAGTTAAGCAGCATGTCATAAACATGGTAGCAATTAACTAGGTATAGCTAGCTAGCCATTGAAGTGCACAGCCAGCACACATCTCTGCATGCACCTTCAAGTGGGAGTATAGCTAGAGAGGAAACTGCAACTCTGTGGGCAGTGAAAGGAAGATTAAATTCTTGCCAAAAACAAAACCACACCTCATCATAACATCACATATATATAAATATATACCATGTGAGTTTGAGTTTTTTTTTCTTTCTTCTGTTCATTTCCTCTGAGTTAGGTGATGCACATGCTGGCCCATAATGATTTGGTAAGGACCCATTTGTTGATCATGTGCATGGCAAGTGCAGCTGCCAGTACACCCCAACAGTAATGCATTGCATTGTACTCCTGCTGCATCTGCATATGCATGCCCACTCTACCTTTTGTAGGGTGGCCCATCTTGATGGCTTGCTTGATGGCTCCCATCTGTCTAACCCAGATTTTGATGATCTCAAGTGTGTGTTTGGCATGCACTGGAGCTGATCTGATCAACAGTGTGTCTACATGCTATTGCATGCATGCATCACTGTTTTAGCTCTTTCAATTGAGCAAAATGTGATGGATTCTAGCTAAGCTAGAACAGTTTGTGTTGTTCTCTTTTCTTGCCTATATTGGTCCACCAGATTCTGTGCTTCGTTTTCAGCTGGTAATCATTGGTTAGGAAAGACATCAACATATATATATATATGCACCTAGCTAGTTTTTGTTCTTTTTGCATCTTGCAAAAGGAACAATGATTATTGTCCTGGCTTTATCAATCGATGATAGTGTGCCGTATATCACAGGGACCTTGTAAGGAACATTGCAGTCATATGAACCACTCATTTAATTCTGGTCTAGGAGCATTGCTCTAATTACCTCATATCCCCTAGCTATCTGATAAAAGTCATCTATTACAAGTTACTATCTAGGTTTGTTAAATTGTACTCCACTAAGAAAAAAATACACTAGCACATAAAACTAATTCGTGCTGGCTAGGAACCCCACAGGTGCCGTGTTATGAATCCAACAAAGCGACACTTACCGATAATGGTTACTATTGCCAGTTATAGAACCGATACATATGTGAGCATATATGGGCGGTTCTAATATAATTAAGAACCGACACATATGAAACCTAGGGTGCATTGGAAGGCTCATATATGTCGGTTAAGAAGTACATTCGGCCGGTTCTTCACAACATTTGGTACTTATGGAGCTCACTAGGATGTGTTGGCAGGTCCATATGTGCTAGTTGTTGACGTAAAAAAATATACCTACACCTGCTCCAAACCAAAAAAATATATGATAAATTCATATATTCACAATCAAAATGATAGATTGATATAAATGTGTAGAATTTTAATTGAGGCTATCAAGGTCCCAAGTGATTGAAATCTTTGAAAACTTACAAATATTTAGGCATTTGAAATCTAGGATATACCTAATGAAAATATGCTTATTGACTTATCAGCGTGCTGGCCAAAATTTGCATTTTGTTAGAGTTGATTTTAGGGGTTTTTTTTCCATCGTAGTTTAGTTTCTAGTATTATCATTTTAAACTGCTGATTTTTCTATGGCTTATCAACGGTAGCTCAACCGAATGCTAGTAAAATCCCAAATTAACTTGGAATTAACCTTGCAGTAACCAGAATGTACACACATATTATGACTTGGAGTTTCCATTATTTTAGTGATATTGCCTGCTTGCCTTTCCTTCAATTTGGTATGTAGTACCTATACCCTTGCATGATGAAATAAGGATAAATATGTGCATTAGTACAGGTTCTTTGCCTTTTGAGACCATGCTGTACTAACGAAGGAGCCCAAAGTTTCTCTATCAGGCAAAATAGAATCCAGATGGAGCACCAATTACTCCTACAAAACTATGTGGCATATTTTGTTTTACTATTCTTTCAAATCAAGTATTGAGAAGTAGAAGTATATATACAACACTACAACTACTTAAAACATGTAATTAATGTATACATCTGAAGGAACAAAAATAATCCCTTGCAAAATACTTCGAATATAAATTTGAATGAAATGATCCAATATATCGATGCCCACATTTCATTGATAAACACAAATATATCCGATGGATGGAGATTGTCTACAGTACTACCGCTGCAGTGGCTGCTACATTTTGCATATATCTATCCAAATTAATCAGGACTAATTCAGCTTGTAATCAACAGCATAAATTAATATTAAAATCGTTACTCTCACCGTCCTAAAATATAACAATGTATAACTATGTATATAGGAGGAGGAGTTCTTCAGCGAGAGCGACGGGTTCCCGAGGAAGGCGTTCCCGCACAGCTGGAGGGGGAAGAACGGCCTCTACGCCACCGGATTCACCAAGAGGGGCCTCCAGGGCACCTCCTACGACGCCGCCATGATCGCCGCCGACATCGCCCGCCGCTGGACCAAGTCCCTCGCCGGCCCTACTGCCGCCGCCGACGCCGACCACCATGAGACATACATAGCTAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037469