BGIOSGA035792

From RiceWiki
Revision as of 18:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA035792

Description

cDNA clone:J023078I07, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA035792, complete gene.

LocusTag

OsJ_36950

Ensembl Transcript ID

BGIOSGA035792-TA

Ensembl Protein ID

BGIOSGA035792-PA

Length

1114

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22457784..22458897

Sequence Coding Region

22458877..22458897,22458107..22458372,22457784..22457934

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22457784..22458897 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22457784..22458897 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCGTCAGATCACGCGCAAATGCTTCCTCTGGAATCGGTGTAGCTGCCGAGTGCAAGCAGACATTCCTGGAGCTCCAGAGGAAGAAATCACACCGCTATGTCATCTTCAAGATCGACGACAAGTGCAAGGAGGTTGTCGTCGACAAGACAGGTTCATCGACCGAGAGCTTCGACGATTTCATGGACTCGCTCCCTGAATCTGACTGCCGCTACGCCATCTACGACTTCGACTTCGTCACCGAGGAGAACTGCCAGAAGAGCAAGATCTTCTTCGTCGCATGGTCGCCTTCGGTTTCTCGCATCCGCGCCAAGATGTTGTATGCTACCTCCAAAGAACGGTTCAGGAGAGAGCTGGATGGTGTGCACTATGAGATTCAGGCAACTGATCCATCGGAGCTGGACATTGAGCTTCTTAGAGACCGTGCTCATTGA</cdnaseq>

Protein Sequence

<aaseq>MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVDKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRDRAH</aaseq>

Gene Sequence

<dnaseqindica>1..21#526..791#964..1114#ATGGCGTTCGTCAGATCACGCGTGAGTTTCCCTCTTCTCTCGCCTAGCTTGTTACTGATCGCCAACTTCGATCTCCTCTATGCCTGAGAAGACCGAGACCGATTGATTGACCATTGTTATATATGTTAATATGTACATCTCTCCATTTCTCTCTCTCTCTCTCGTTGATGTTACATCCTCACTGTTTACTGTTTAGCCAGTAAAATTTGTGGTTTTACAGCGTACATAGCTAGTGAATTTACGTGGTTTTACGTGGAGATGGGGGGAAACTAGTGAATTTTTACATTCTTTTCTGAACACAATATGGGTTCTTGTTGATGCATGACAGCATGAGAGCCAATCCGTATTGTCCACTGTAAATTATATAGCTCCGATTTTGGTATCCAATCACTTGAAAATTTGTAGAATATACCTGTTGAATTGAATGATCAATAATACATCAACATGATCTCTGATCAGATTATTAGGTTCCTTTCTTAATTATTCAATACCATCAGTAAATTCACCTGATTCCTCTGCATGCAGGCAAATGCTTCCTCTGGAATCGGTGTAGCTGCCGAGTGCAAGCAGACATTCCTGGAGCTCCAGAGGAAGAAATCACACCGCTATGTCATCTTCAAGATCGACGACAAGTGCAAGGAGGTTGTCGTCGACAAGACAGGTTCATCGACCGAGAGCTTCGACGATTTCATGGACTCGCTCCCTGAATCTGACTGCCGCTACGCCATCTACGACTTCGACTTCGTCACCGAGGAGAACTGCCAGAAGAGCAAGATCTTCTTCGTCGCATGGTCGGTGAACCCCAAATGTTCAGATTTTTGCACTTGCTTCTCAGCTTCTGAACTGAATGAATTTCTCTGACAACATATATATGCACACTTTTCTAACTGAAAGTGTATGATCGAGTTGTTCATCAGTAACAGTACTCTTTTTTGACTGAAAATCTGATCTCCGATCTCTCAGGTCGCCTTCGGTTTCTCGCATCCGCGCCAAGATGTTGTATGCTACCTCCAAAGAACGGTTCAGGAGAGAGCTGGATGGTGTGCACTATGAGATTCAGGCAACTGATCCATCGGAGCTGGACATTGAGCTTCTTAGAGACCGTGCTCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035792